| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is aes [H]
Identifier: 167624653
GI number: 167624653
Start: 3317648
End: 3318583
Strand: Reverse
Name: aes [H]
Synonym: Shal_2735
Alternate gene names: 167624653
Gene position: 3318583-3317648 (Counterclockwise)
Preceding gene: 167624654
Following gene: 167624647
Centisome position: 63.49
GC content: 41.77
Gene sequence:
>936_bases ATGAGAAATGTAAGTGAAAAACTCAAACCTTGGCTAGATAACTTTAATACACAAATAGCAGTTTTAATTGAAAACGGCTT TAAGCCAACAGCGACTAATGCACGTGAAGGTTTAGCTAATCTGACGAAAGGTTTAGTGACAAATATTCCTGATATTGCAT GGGTAGCCGACGATTTGGTCATGAATGAACAGTACAATGTACCCGTACGTATTTATCATCCGGTGCCCACTAAAAAATTA CCTGTAATTGTGTATTTTCATGGTGGTGGACACATGGCTGGTAGTGTCACGGTTTACGATCCCATTTGCCGTAAACTTGC CAATGCGACTCAACATATCGTGGTATCGGTTGACTATAGACTGGCACCAGAGTGCCCATATCCTGCTGGCGTGAATGACG GTTATGCAGTAGTTGAAGGGATCTGGGCAGTACTCGATGGACGTTCAGTTAATTATCAGAAGCAACTATCCGTAGTCGGA GATTCTGGTGGTGGCGCATTGGTGGCTAGCGTAAGCGGACGAGCTCAATTTGATAAGTCGGTGATTATTGACAAACAGGT AATGATATACCCAAGCCTTGATTACACAATGGACACTCCTTCAATGGATCAAAATGCCGTTGGGTACTTATTACAAAAAG GCAAAATTGGCTGGTATTTTGATAACTATTTTAGTGAAGCTGACGACAGAGTCGCTGCATCCCCACTGCATGGTAATTTA ACCCGCGCATTACCGGAAACGTTAGTATTTACTGCTGAATTCTGTCCATTAAGAGATGAAGGCAAAATGTACGTAGACAA AGTTAAGCAAGCGGGTGGTAAAGCAGAGTTGATACACTTTGATGATATGATCCACACGTTTTTGAACATGGAAGACCTTG TTCAAGCTGAGTGCGATTTAGTTTATCGAACAATGGGTGAGTTTTTGAATCGATAA
Upstream 100 bases:
>100_bases TTCATCTACCTTCTTTATTGCTAGCTTCTTTTTACCTGAAACCGGTAAAAGAAAACCTGTTCCATCATCAGTCACTGTAA CGAAATAATTGGGAAGTATT
Downstream 100 bases:
>100_bases TTGCTTTCAACCATTGTTTTGACTAACAAAAAAGACCGTTTATAGATTCTATTCGGTCTTTTTTCTTTAAAATTCAAAAC TGCTGATATTAGAATTTAAG
Product: alpha/beta hydrolase domain-containing protein
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRNVSEKLKPWLDNFNTQIAVLIENGFKPTATNAREGLANLTKGLVTNIPDIAWVADDLVMNEQYNVPVRIYHPVPTKKL PVIVYFHGGGHMAGSVTVYDPICRKLANATQHIVVSVDYRLAPECPYPAGVNDGYAVVEGIWAVLDGRSVNYQKQLSVVG DSGGGALVASVSGRAQFDKSVIIDKQVMIYPSLDYTMDTPSMDQNAVGYLLQKGKIGWYFDNYFSEADDRVAASPLHGNL TRALPETLVFTAEFCPLRDEGKMYVDKVKQAGGKAELIHFDDMIHTFLNMEDLVQAECDLVYRTMGEFLNR
Sequences:
>Translated_311_residues MRNVSEKLKPWLDNFNTQIAVLIENGFKPTATNAREGLANLTKGLVTNIPDIAWVADDLVMNEQYNVPVRIYHPVPTKKL PVIVYFHGGGHMAGSVTVYDPICRKLANATQHIVVSVDYRLAPECPYPAGVNDGYAVVEGIWAVLDGRSVNYQKQLSVVG DSGGGALVASVSGRAQFDKSVIIDKQVMIYPSLDYTMDTPSMDQNAVGYLLQKGKIGWYFDNYFSEADDRVAASPLHGNL TRALPETLVFTAEFCPLRDEGKMYVDKVKQAGGKAELIHFDDMIHTFLNMEDLVQAECDLVYRTMGEFLNR >Mature_311_residues MRNVSEKLKPWLDNFNTQIAVLIENGFKPTATNAREGLANLTKGLVTNIPDIAWVADDLVMNEQYNVPVRIYHPVPTKKL PVIVYFHGGGHMAGSVTVYDPICRKLANATQHIVVSVDYRLAPECPYPAGVNDGYAVVEGIWAVLDGRSVNYQKQLSVVG DSGGGALVASVSGRAQFDKSVIIDKQVMIYPSLDYTMDTPSMDQNAVGYLLQKGKIGWYFDNYFSEADDRVAASPLHGNL TRALPETLVFTAEFCPLRDEGKMYVDKVKQAGGKAELIHFDDMIHTFLNMEDLVQAECDLVYRTMGEFLNR
Specific function: Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=292, Percent_Identity=28.0821917808219, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI68299767, Length=298, Percent_Identity=25.503355704698, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI68051721, Length=292, Percent_Identity=25, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI157041239, Length=182, Percent_Identity=30.2197802197802, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI226423947, Length=300, Percent_Identity=23.6666666666667, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1786682, Length=256, Percent_Identity=25.78125, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17567059, Length=335, Percent_Identity=25.0746268656716, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71996133, Length=133, Percent_Identity=30.8270676691729, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17540028, Length=171, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72001146, Length=134, Percent_Identity=32.8358208955224, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 34503; Mature: 34503
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVSEKLKPWLDNFNTQIAVLIENGFKPTATNAREGLANLTKGLVTNIPDIAWVADDLV CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH MNEQYNVPVRIYHPVPTKKLPVIVYFHGGGHMAGSVTVYDPICRKLANATQHIVVSVDYR CCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHCCCCEEEEEEEEEE LAPECPYPAGVNDGYAVVEGIWAVLDGRSVNYQKQLSVVGDSGGGALVASVSGRAQFDKS ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCE VIIDKQVMIYPSLDYTMDTPSMDQNAVGYLLQKGKIGWYFDNYFSEADDRVAASPLHGNL EEECCEEEEEECCCCEECCCCCCCHHHHHHHHCCCEEEEEHHHHCCCCCCEECCCCCCCH TRALPETLVFTAEFCPLRDEGKMYVDKVKQAGGKAELIHFDDMIHTFLNMEDLVQAECDL HHHHHHHHEEEHHCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHCHHHHHHHHHHH VYRTMGEFLNR HHHHHHHHHCC >Mature Secondary Structure MRNVSEKLKPWLDNFNTQIAVLIENGFKPTATNAREGLANLTKGLVTNIPDIAWVADDLV CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH MNEQYNVPVRIYHPVPTKKLPVIVYFHGGGHMAGSVTVYDPICRKLANATQHIVVSVDYR CCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHCCCCEEEEEEEEEE LAPECPYPAGVNDGYAVVEGIWAVLDGRSVNYQKQLSVVGDSGGGALVASVSGRAQFDKS ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCE VIIDKQVMIYPSLDYTMDTPSMDQNAVGYLLQKGKIGWYFDNYFSEADDRVAASPLHGNL EEECCEEEEEECCCCEECCCCCCCHHHHHHHHCCCEEEEEHHHHCCCCCCEECCCCCCCH TRALPETLVFTAEFCPLRDEGKMYVDKVKQAGGKAELIHFDDMIHTFLNMEDLVQAECDL HHHHHHHHEEEHHCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHCHHHHHHHHHHH VYRTMGEFLNR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA