Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624462

Identifier: 167624462

GI number: 167624462

Start: 3071426

End: 3071791

Strand: Reverse

Name: 167624462

Synonym: Shal_2540

Alternate gene names: NA

Gene position: 3071791-3071426 (Counterclockwise)

Preceding gene: 167624464

Following gene: 167624461

Centisome position: 58.77

GC content: 40.44

Gene sequence:

>366_bases
GTGCTTACTAAAATTTTAATCACCTTACTGATCATCGTTGGCGCGATGGTTTATATCCGTAAACCGAGAGAAAACGGTGT
CCGAGCGAGTACAAAAGAGTTAGGTAAGAACATGAAGCTGCGGATTGGTGCTTATGTACTGATTAGTTTATCGCTCACCG
CTACGGGTGCTTATTGGTATTGGGATTGGAGTGATGGTAATAAAGTTGTCAGTGTGACAATAGTGTCACCTATGAGTGAC
GAGACGGTTGTTTATCAAGTTAGAAAGAAAGATATTGCTAGCAATGAGATAACAACTGTCAACGGAATTCGCATTAGATT
GTCCAATCAGGAGCGTATTATCGTTGCGAATTCGGTTAATAAGTAA

Upstream 100 bases:

>100_bases
CTGAATTTACCTCACTCGTATGCCAATGCTTGGATATTAATAACAGTTTATCCGTTTTTTTGTAGGTATAATTAGCGTAA
ACAGCGCAAAGGGAAAGCAA

Downstream 100 bases:

>100_bases
TTTTTGAGCACTTTATTATGCTTAACCCTTTGCAATAAGGTGTTATAGGTTAGAATAGCCCACGTTTTTTTGTTCAGAAT
ATTTGCTATACGCGTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLTKILITLLIIVGAMVYIRKPRENGVRASTKELGKNMKLRIGAYVLISLSLTATGAYWYWDWSDGNKVVSVTIVSPMSD
ETVVYQVRKKDIASNEITTVNGIRIRLSNQERIIVANSVNK

Sequences:

>Translated_121_residues
MLTKILITLLIIVGAMVYIRKPRENGVRASTKELGKNMKLRIGAYVLISLSLTATGAYWYWDWSDGNKVVSVTIVSPMSD
ETVVYQVRKKDIASNEITTVNGIRIRLSNQERIIVANSVNK
>Mature_121_residues
MLTKILITLLIIVGAMVYIRKPRENGVRASTKELGKNMKLRIGAYVLISLSLTATGAYWYWDWSDGNKVVSVTIVSPMSD
ETVVYQVRKKDIASNEITTVNGIRIRLSNQERIIVANSVNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13571; Mature: 13571

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKILITLLIIVGAMVYIRKPRENGVRASTKELGKNMKLRIGAYVLISLSLTATGAYWY
CHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCEEEEEEEEEEEEEEEECCEEEE
WDWSDGNKVVSVTIVSPMSDETVVYQVRKKDIASNEITTVNGIRIRLSNQERIIVANSVN
EEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECEEEEEECCCCEEEEEECCC
K
C
>Mature Secondary Structure
MLTKILITLLIIVGAMVYIRKPRENGVRASTKELGKNMKLRIGAYVLISLSLTATGAYWY
CHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCEEEEEEEEEEEEEEEECCEEEE
WDWSDGNKVVSVTIVSPMSDETVVYQVRKKDIASNEITTVNGIRIRLSNQERIIVANSVN
EEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECEEEEEECCCCEEEEEECCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA