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The map label for this gene is 167624438

Identifier: 167624438

GI number: 167624438

Start: 3035835

End: 3037274

Strand: Reverse

Name: 167624438

Synonym: Shal_2516

Alternate gene names: NA

Gene position: 3037274-3035835 (Counterclockwise)

Preceding gene: 167624439

Following gene: 167624436

Centisome position: 58.11

GC content: 45.56

Gene sequence:

>1440_bases
ATGAAAGCCATTATTATTGGATCGACAAAACATCTCGCCTTTGCTTTGTTTTATGCGTCGTTAGGCACTAGCATTGCGTT
AATTGCTATGGTGGTGTGGTTTTTAAACTCCCGTCCCGAACTGTCACTTTGGCATACTACCGAGCTAACCTCCGAGTATC
GCTTAAAGAGCAACCTTAATAGCTTCGATGAATATCTGGAGCTTGAAGATAAGCTCTTTGCTGAGCTAGAGAGTAAAGTG
TATCAACAGTCTAGCGAGCCGCAGTCGCTCGACATTCTCAATCGTTATGTAAGAGGAAGTTATTCAGATCCTGGTCACTG
GATCCAAGATTGGAATCGCAGTTATGAGTGGGCTAACGCTGACGCAGAATATGGGGTATTACTCATCCACGGCATGTCTG
ACTCTCCTTATGCTATGTCGCATTTCGCTAAACATTATAAGAACAAGGCCCATGTTTTGGGACTCAGGTTGCCGGGTCAT
GGCACCTTGCCCTCGGCGTTGACCAATATCTATTGGCAAGATATGGCTGGTGCAGTTGCTTTGGCGACCAGGCATATGAA
AACGGCTTTGGGTGACAAACCTTTATATGTAGTCGGATTTTCAACGGGAGCAGCATTGGCGTTGAATCATGACCTTGAGC
GCTTAGCTGTTAATAGAGCCGCAGATTATTCGGCCATGGTGTTGATCTCGCCCGCTATCGGTCTTCCTCCGGTCGCAGCA
GGCGCTAAGTGGCAGGCAAGGCTTGGTAACCTACTAGGGTTAGATAAACTGAGCTGGAACAGTATTCAAGTCGAATATGA
CCCGTTCAAGTATGGCTCCTTTGCTGTAAATGCTGGCGATGTCGTTTATCAACTTTCAATGCGTAATCATGAGCTGGTTT
GGCAACTTGAGCATGATGGACTCAATGAGCTGCCGCCAATCTTGACGTTTCAATCGCTTACCGATGATACCGTAGATACA
AGTGCGGTGGTCAATGGCCTATATAGTCGCTTGCCAAGCGCAGGTCATGAGCTGGTGTTATTTGATATCAATCGCACTCA
GGTGAACTTGAGTCTGATTTTGAATGACCCTATACAGCCTTATCAACAGCTGATGGCGCAGGGGGAGTTTAACTATGACT
TTACTCTGATTGAAAACCGCAGTCTAAAGAGCAAATATATTCAAGCTCGTAACTTAAATGACAATAGCATTACCTCTCTA
GGGCTAAGCTGGCCTAAGCAGGTTTACTCGCTATCGCATGTTGCCTTGCCGTTTCCTAAAAGTGATGCCTTGTATGGGCC
TATTTGGGATGCAAATAAGCCCCATATTCAGATTGGCACAGGGGCTTCTAGAGGAGAGAGAGGGGTGATCAGTGTGCCTG
CTAGCGAAATCATGAGACAGAAATGGAATCCATTTTATCCTTATATACTTGATAAAATGGATGAGGTAATAATCCCTTAA

Upstream 100 bases:

>100_bases
TGTATATTTTTATTCCATTTTCCTCAGTTTTCCGTTTCACTGTAAAAACATGTAAGTTATCTTTTACTATATTGCCTGTT
TAGGATGAATAGCGACGCTT

Downstream 100 bases:

>100_bases
AGGGCCAGACTCAGAACGCATAAACTAAAAGCAATACATGACCTCCGCTCTAGGTTGTTGCTAGCAGGTTTTTGCCCTGT
TCATTAATCTTTTAAGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKAIIIGSTKHLAFALFYASLGTSIALIAMVVWFLNSRPELSLWHTTELTSEYRLKSNLNSFDEYLELEDKLFAELESKV
YQQSSEPQSLDILNRYVRGSYSDPGHWIQDWNRSYEWANADAEYGVLLIHGMSDSPYAMSHFAKHYKNKAHVLGLRLPGH
GTLPSALTNIYWQDMAGAVALATRHMKTALGDKPLYVVGFSTGAALALNHDLERLAVNRAADYSAMVLISPAIGLPPVAA
GAKWQARLGNLLGLDKLSWNSIQVEYDPFKYGSFAVNAGDVVYQLSMRNHELVWQLEHDGLNELPPILTFQSLTDDTVDT
SAVVNGLYSRLPSAGHELVLFDINRTQVNLSLILNDPIQPYQQLMAQGEFNYDFTLIENRSLKSKYIQARNLNDNSITSL
GLSWPKQVYSLSHVALPFPKSDALYGPIWDANKPHIQIGTGASRGERGVISVPASEIMRQKWNPFYPYILDKMDEVIIP

Sequences:

>Translated_479_residues
MKAIIIGSTKHLAFALFYASLGTSIALIAMVVWFLNSRPELSLWHTTELTSEYRLKSNLNSFDEYLELEDKLFAELESKV
YQQSSEPQSLDILNRYVRGSYSDPGHWIQDWNRSYEWANADAEYGVLLIHGMSDSPYAMSHFAKHYKNKAHVLGLRLPGH
GTLPSALTNIYWQDMAGAVALATRHMKTALGDKPLYVVGFSTGAALALNHDLERLAVNRAADYSAMVLISPAIGLPPVAA
GAKWQARLGNLLGLDKLSWNSIQVEYDPFKYGSFAVNAGDVVYQLSMRNHELVWQLEHDGLNELPPILTFQSLTDDTVDT
SAVVNGLYSRLPSAGHELVLFDINRTQVNLSLILNDPIQPYQQLMAQGEFNYDFTLIENRSLKSKYIQARNLNDNSITSL
GLSWPKQVYSLSHVALPFPKSDALYGPIWDANKPHIQIGTGASRGERGVISVPASEIMRQKWNPFYPYILDKMDEVIIP
>Mature_479_residues
MKAIIIGSTKHLAFALFYASLGTSIALIAMVVWFLNSRPELSLWHTTELTSEYRLKSNLNSFDEYLELEDKLFAELESKV
YQQSSEPQSLDILNRYVRGSYSDPGHWIQDWNRSYEWANADAEYGVLLIHGMSDSPYAMSHFAKHYKNKAHVLGLRLPGH
GTLPSALTNIYWQDMAGAVALATRHMKTALGDKPLYVVGFSTGAALALNHDLERLAVNRAADYSAMVLISPAIGLPPVAA
GAKWQARLGNLLGLDKLSWNSIQVEYDPFKYGSFAVNAGDVVYQLSMRNHELVWQLEHDGLNELPPILTFQSLTDDTVDT
SAVVNGLYSRLPSAGHELVLFDINRTQVNLSLILNDPIQPYQQLMAQGEFNYDFTLIENRSLKSKYIQARNLNDNSITSL
GLSWPKQVYSLSHVALPFPKSDALYGPIWDANKPHIQIGTGASRGERGVISVPASEIMRQKWNPFYPYILDKMDEVIIP

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53666; Mature: 53666

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIIIGSTKHLAFALFYASLGTSIALIAMVVWFLNSRPELSLWHTTELTSEYRLKSNLN
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCH
SFDEYLELEDKLFAELESKVYQQSSEPQSLDILNRYVRGSYSDPGHWIQDWNRSYEWANA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
DAEYGVLLIHGMSDSPYAMSHFAKHYKNKAHVLGLRLPGHGTLPSALTNIYWQDMAGAVA
CCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
LATRHMKTALGDKPLYVVGFSTGAALALNHDLERLAVNRAADYSAMVLISPAIGLPPVAA
HHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GAKWQARLGNLLGLDKLSWNSIQVEYDPFKYGSFAVNAGDVVYQLSMRNHELVWQLEHDG
CCCHHHHHCCHHCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCEEEEEECCCC
LNELPPILTFQSLTDDTVDTSAVVNGLYSRLPSAGHELVLFDINRTQVNLSLILNDPIQP
CCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCCCHH
YQQLMAQGEFNYDFTLIENRSLKSKYIQARNLNDNSITSLGLSWPKQVYSLSHVALPFPK
HHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHEEECCCC
SDALYGPIWDANKPHIQIGTGASRGERGVISVPASEIMRQKWNPFYPYILDKMDEVIIP
CCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKAIIIGSTKHLAFALFYASLGTSIALIAMVVWFLNSRPELSLWHTTELTSEYRLKSNLN
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCH
SFDEYLELEDKLFAELESKVYQQSSEPQSLDILNRYVRGSYSDPGHWIQDWNRSYEWANA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
DAEYGVLLIHGMSDSPYAMSHFAKHYKNKAHVLGLRLPGHGTLPSALTNIYWQDMAGAVA
CCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
LATRHMKTALGDKPLYVVGFSTGAALALNHDLERLAVNRAADYSAMVLISPAIGLPPVAA
HHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GAKWQARLGNLLGLDKLSWNSIQVEYDPFKYGSFAVNAGDVVYQLSMRNHELVWQLEHDG
CCCHHHHHCCHHCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCEEEEEECCCC
LNELPPILTFQSLTDDTVDTSAVVNGLYSRLPSAGHELVLFDINRTQVNLSLILNDPIQP
CCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCCCHH
YQQLMAQGEFNYDFTLIENRSLKSKYIQARNLNDNSITSLGLSWPKQVYSLSHVALPFPK
HHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHEEECCCC
SDALYGPIWDANKPHIQIGTGASRGERGVISVPASEIMRQKWNPFYPYILDKMDEVIIP
CCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA