Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is rec2 [H]

Identifier: 167624429

GI number: 167624429

Start: 3024081

End: 3026432

Strand: Reverse

Name: rec2 [H]

Synonym: Shal_2507

Alternate gene names: 167624429

Gene position: 3026432-3024081 (Counterclockwise)

Preceding gene: 167624431

Following gene: 167624428

Centisome position: 57.9

GC content: 45.41

Gene sequence:

>2352_bases
ATGAATCGATTTATGTGCGGCTACTGCATCACTATTGTTTCAGCGTTGCTTTGGCCCTCTCTACCTACTCTCTATATTCT
GCCTGTACTTATCGTTGTGGCTATTATCGCGTGTAAGCGTGTGCCGTTTATCGCTGGCAGCCTGTTTGCAATTAGTTGGA
TTAGCCTGTTTTATTCACTATTAATGGGTTGGAATACAGATGAACGAGTCGATACATTGAATGTCGAGTCTGAGATCATA
TCATTTGTTCATACAAACGGCGACCGGATCAGTATGGATATTGTGCTTATCGATTCGGTTTTTTCCCATATTGTTAATCG
AAAGCTGAGGTTAACTTGGCGTGACGCTCCGCCCGTAGCACCAGGTCAGCGCTGGTTGTTAACCATAAAGCCCAAGTCCA
TCACCAGCATGTTAAATCAGGGCGGTTTTAACCAACAAAAGAATTTGCTCGCTAAACATATTATAGGAAAAGGTTGGGTT
GTTAGTGGGAAGTTGTTAAGAAACGAGCCTGATTATCGTACAAGATTAATTTCAGCGCTGAAATCTGTGTTGGTCGATGA
CGCTAGTGGCGATCTGTTACTTGCGCTGGTGGCCGGAGATAGGAGCCTTATTTCATCAGCACGTTGGCAACAGCTCAGAA
ATACGGGAACGGGTCATCTGTTTGCTATCTCAGGTTTACACCTTTCGGTGGTATCGCTTTGGTTGTTGATCCTTACTCGC
TTTTTCTTGTATCGATACTCGGCGGTAAATACTCGCCGAAATTGGTTGTTGTGTTTGGTTATCTCTGCTCTGGGCGCAAT
CGCCTACGCATACCTTGCGGGTTTTTCTGTTTCGACACAAAGAGCGCTGATCATGTTGCTGGCGTTTATCTGTTTTAGCG
CATTGAAAACACACTCCTCAAGTTGGGAGCGGCTACTCTATGCACTCTTTATCGTCTTAGTTCTTGACCCCTTGAGCATG
CTTAGTGCTGGTTTTTGGCTATCTTTTAGCGCCTTGGCGATTATCTTACTCACTGTGACTCAGTATCGGTTTAGTGATGA
AGCGGGTTCCAATATCGGCCTGTCACCAAGCGAGAGTGTTGCCACAAGTTGGAATTTGACTCTATGGAGCAAGCTTCGTA
TGGCGGCCCTCTCTTTTTGGGCGGTACAGTGGCGTTTAACCCTTGGGTTATGTGTGGTTCAGGCTATCTTTTTTTCCGGA
GCATCAATGGCCAGCCTAGTCGTCAATCTGCTGTTAGTCCCTTGGTTTACCTTGCTGCTTATCCCTATAAGTCTGTTGTC
ATTATTGGTTTTTATTCTGCTAACCAACTTTGGTATATCGGCGCCGGGAGTATTTGTCCTTGCGGCTTATGCTATGTCGC
CTGTGGTCAGTATATTGAACTACAGTAGTTCTGTTGATTTTGTGTGGCTCGATCTCGCCAATGAGGTTATCGCTGCTTTG
ATGGTTGCATTAATAGGCCTTTACCTTACGGTCAATTTTAAACAATGGCCATGGCGGATCCTACTGTCGGTGATGTTCAT
TCCCTTATTGCTCACGATACTGTTTAGATTGATGCCCATTGACGATAAGCGCTGGCAAGTTCACCTGCTCGATGTGGGCC
AAGGTCTCTCGCTCGTTATTGAGCAGGGCAAGCGAGCCATTATTTATGATACAGGCGCCCGTTATGGCAAAAACTTTAGT
TATGCTGAGCGGGCACTGCAGCCATTTCTCAAAAGTAGGGGGCTTGGGCATATCGATTACCTTGTTGTGAGTCATGGTGA
CAATGATCATTCTGGCGGCGCCGCTTATATCATTGATAATTACCCCGATGCCGAGGTGATTTCAGATTTGCCTCTTCAGC
AACATGATTGCAGACCCAAGACACTGTTTTGGCAGGGGCTGAGACTCGAGATATTGGCGCCCTATGTGCCTAAATCGGGT
AATAACGGTTCATGTGTGATTCGAGTGAGTGATGCTGATAACAGCGTATTATTAACGGGGGATATAGAGCAGCAGGCTGA
GTATCGATTGCTTGAAATGACAAAGAGTCATGACCTCATTCTACAGAGTCGATTGTTAATAGCCCCTCATCATGGTAGTA
AGACCTCATCGACCGAATCATTTATTGATGCCGTCTCTCCTGAGCTGGTTTTGTTTCCAGCAGGCTTTCGAAACCGCTAT
GGCTTTCCTAACAAAGAGGTCATTGCACGCTATCAGCAACGGGATATTTTAACTCTCACGGCTGGGATGCAGGGGCAGGT
CAGTGTTTTATTTGACCAAGAAAGTATGAAAGTTCGTACATATCGTTCAGATTTTGCACCATTTTGGTATAACCAAGTGT
TTAGGTTTGGTCAGATTAAAAATCCAGAGTAG

Upstream 100 bases:

>100_bases
GCGCAAGTGTTTGTGTTCGCGCAGTGTTTCTGGCTTCGGCATAAACTTTTCAATTATTTTTTTTGGCATAACTTCAATTT
GCTGTCTTAACTTACTCACT

Downstream 100 bases:

>100_bases
AATGCTTCTTTTGCCAATATGTTAATCTCTCAATGACAACATCTCCTAAAAATGAAGTCTGGACTGTATTTAAGCGCCTG
TTAGGCTATTTAAAGCCTCT

Product: DNA internalization-like competence protein ComEC/Rec2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MNRFMCGYCITIVSALLWPSLPTLYILPVLIVVAIIACKRVPFIAGSLFAISWISLFYSLLMGWNTDERVDTLNVESEII
SFVHTNGDRISMDIVLIDSVFSHIVNRKLRLTWRDAPPVAPGQRWLLTIKPKSITSMLNQGGFNQQKNLLAKHIIGKGWV
VSGKLLRNEPDYRTRLISALKSVLVDDASGDLLLALVAGDRSLISSARWQQLRNTGTGHLFAISGLHLSVVSLWLLILTR
FFLYRYSAVNTRRNWLLCLVISALGAIAYAYLAGFSVSTQRALIMLLAFICFSALKTHSSSWERLLYALFIVLVLDPLSM
LSAGFWLSFSALAIILLTVTQYRFSDEAGSNIGLSPSESVATSWNLTLWSKLRMAALSFWAVQWRLTLGLCVVQAIFFSG
ASMASLVVNLLLVPWFTLLLIPISLLSLLVFILLTNFGISAPGVFVLAAYAMSPVVSILNYSSSVDFVWLDLANEVIAAL
MVALIGLYLTVNFKQWPWRILLSVMFIPLLLTILFRLMPIDDKRWQVHLLDVGQGLSLVIEQGKRAIIYDTGARYGKNFS
YAERALQPFLKSRGLGHIDYLVVSHGDNDHSGGAAYIIDNYPDAEVISDLPLQQHDCRPKTLFWQGLRLEILAPYVPKSG
NNGSCVIRVSDADNSVLLTGDIEQQAEYRLLEMTKSHDLILQSRLLIAPHHGSKTSSTESFIDAVSPELVLFPAGFRNRY
GFPNKEVIARYQQRDILTLTAGMQGQVSVLFDQESMKVRTYRSDFAPFWYNQVFRFGQIKNPE

Sequences:

>Translated_783_residues
MNRFMCGYCITIVSALLWPSLPTLYILPVLIVVAIIACKRVPFIAGSLFAISWISLFYSLLMGWNTDERVDTLNVESEII
SFVHTNGDRISMDIVLIDSVFSHIVNRKLRLTWRDAPPVAPGQRWLLTIKPKSITSMLNQGGFNQQKNLLAKHIIGKGWV
VSGKLLRNEPDYRTRLISALKSVLVDDASGDLLLALVAGDRSLISSARWQQLRNTGTGHLFAISGLHLSVVSLWLLILTR
FFLYRYSAVNTRRNWLLCLVISALGAIAYAYLAGFSVSTQRALIMLLAFICFSALKTHSSSWERLLYALFIVLVLDPLSM
LSAGFWLSFSALAIILLTVTQYRFSDEAGSNIGLSPSESVATSWNLTLWSKLRMAALSFWAVQWRLTLGLCVVQAIFFSG
ASMASLVVNLLLVPWFTLLLIPISLLSLLVFILLTNFGISAPGVFVLAAYAMSPVVSILNYSSSVDFVWLDLANEVIAAL
MVALIGLYLTVNFKQWPWRILLSVMFIPLLLTILFRLMPIDDKRWQVHLLDVGQGLSLVIEQGKRAIIYDTGARYGKNFS
YAERALQPFLKSRGLGHIDYLVVSHGDNDHSGGAAYIIDNYPDAEVISDLPLQQHDCRPKTLFWQGLRLEILAPYVPKSG
NNGSCVIRVSDADNSVLLTGDIEQQAEYRLLEMTKSHDLILQSRLLIAPHHGSKTSSTESFIDAVSPELVLFPAGFRNRY
GFPNKEVIARYQQRDILTLTAGMQGQVSVLFDQESMKVRTYRSDFAPFWYNQVFRFGQIKNPE
>Mature_783_residues
MNRFMCGYCITIVSALLWPSLPTLYILPVLIVVAIIACKRVPFIAGSLFAISWISLFYSLLMGWNTDERVDTLNVESEII
SFVHTNGDRISMDIVLIDSVFSHIVNRKLRLTWRDAPPVAPGQRWLLTIKPKSITSMLNQGGFNQQKNLLAKHIIGKGWV
VSGKLLRNEPDYRTRLISALKSVLVDDASGDLLLALVAGDRSLISSARWQQLRNTGTGHLFAISGLHLSVVSLWLLILTR
FFLYRYSAVNTRRNWLLCLVISALGAIAYAYLAGFSVSTQRALIMLLAFICFSALKTHSSSWERLLYALFIVLVLDPLSM
LSAGFWLSFSALAIILLTVTQYRFSDEAGSNIGLSPSESVATSWNLTLWSKLRMAALSFWAVQWRLTLGLCVVQAIFFSG
ASMASLVVNLLLVPWFTLLLIPISLLSLLVFILLTNFGISAPGVFVLAAYAMSPVVSILNYSSSVDFVWLDLANEVIAAL
MVALIGLYLTVNFKQWPWRILLSVMFIPLLLTILFRLMPIDDKRWQVHLLDVGQGLSLVIEQGKRAIIYDTGARYGKNFS
YAERALQPFLKSRGLGHIDYLVVSHGDNDHSGGAAYIIDNYPDAEVISDLPLQQHDCRPKTLFWQGLRLEILAPYVPKSG
NNGSCVIRVSDADNSVLLTGDIEQQAEYRLLEMTKSHDLILQSRLLIAPHHGSKTSSTESFIDAVSPELVLFPAGFRNRY
GFPNKEVIARYQQRDILTLTAGMQGQVSVLFDQESMKVRTYRSDFAPFWYNQVFRFGQIKNPE

Specific function: Might contribute to transformation as a member of a membrane-bound pore complex at the base of the transformasome. It could directly interact with transforming DNA during translocation indirectly by participating in the assembly of the pore [H]

COG id: COG2333

COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081801, Length=794, Percent_Identity=27.5818639798489, Blast_Score=238, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004477
- InterPro:   IPR004797 [H]

Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 87685; Mature: 87685

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFMCGYCITIVSALLWPSLPTLYILPVLIVVAIIACKRVPFIAGSLFAISWISLFYSL
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LMGWNTDERVDTLNVESEIISFVHTNGDRISMDIVLIDSVFSHIVNRKLRLTWRDAPPVA
HHCCCCCCCCEEECHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHCCEEEEEECCCCCCC
PGQRWLLTIKPKSITSMLNQGGFNQQKNLLAKHIIGKGWVVSGKLLRNEPDYRTRLISAL
CCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECHHHCCCCHHHHHHHHHH
KSVLVDDASGDLLLALVAGDRSLISSARWQQLRNTGTGHLFAISGLHLSVVSLWLLILTR
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH
FFLYRYSAVNTRRNWLLCLVISALGAIAYAYLAGFSVSTQRALIMLLAFICFSALKTHSS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SWERLLYALFIVLVLDPLSMLSAGFWLSFSALAIILLTVTQYRFSDEAGSNIGLSPSESV
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
ATSWNLTLWSKLRMAALSFWAVQWRLTLGLCVVQAIFFSGASMASLVVNLLLVPWFTLLL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IPISLLSLLVFILLTNFGISAPGVFVLAAYAMSPVVSILNYSSSVDFVWLDLANEVIAAL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH
MVALIGLYLTVNFKQWPWRILLSVMFIPLLLTILFRLMPIDDKRWQVHLLDVGQGLSLVI
HHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
EQGKRAIIYDTGARYGKNFSYAERALQPFLKSRGLGHIDYLVVSHGDNDHSGGAAYIIDN
HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECC
YPDAEVISDLPLQQHDCRPKTLFWQGLRLEILAPYVPKSGNNGSCVIRVSDADNSVLLTG
CCCHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEC
DIEQQAEYRLLEMTKSHDLILQSRLLIAPHHGSKTSSTESFIDAVSPELVLFPAGFRNRY
CCHHHHHHHHHHHCCCCHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC
GFPNKEVIARYQQRDILTLTAGMQGQVSVLFDQESMKVRTYRSDFAPFWYNQVFRFGQIK
CCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCEEHHHCCCCHHHHHHHHHHCCCC
NPE
CCC
>Mature Secondary Structure
MNRFMCGYCITIVSALLWPSLPTLYILPVLIVVAIIACKRVPFIAGSLFAISWISLFYSL
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LMGWNTDERVDTLNVESEIISFVHTNGDRISMDIVLIDSVFSHIVNRKLRLTWRDAPPVA
HHCCCCCCCCEEECHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHCCEEEEEECCCCCCC
PGQRWLLTIKPKSITSMLNQGGFNQQKNLLAKHIIGKGWVVSGKLLRNEPDYRTRLISAL
CCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECHHHCCCCHHHHHHHHHH
KSVLVDDASGDLLLALVAGDRSLISSARWQQLRNTGTGHLFAISGLHLSVVSLWLLILTR
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH
FFLYRYSAVNTRRNWLLCLVISALGAIAYAYLAGFSVSTQRALIMLLAFICFSALKTHSS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SWERLLYALFIVLVLDPLSMLSAGFWLSFSALAIILLTVTQYRFSDEAGSNIGLSPSESV
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
ATSWNLTLWSKLRMAALSFWAVQWRLTLGLCVVQAIFFSGASMASLVVNLLLVPWFTLLL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IPISLLSLLVFILLTNFGISAPGVFVLAAYAMSPVVSILNYSSSVDFVWLDLANEVIAAL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH
MVALIGLYLTVNFKQWPWRILLSVMFIPLLLTILFRLMPIDDKRWQVHLLDVGQGLSLVI
HHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
EQGKRAIIYDTGARYGKNFSYAERALQPFLKSRGLGHIDYLVVSHGDNDHSGGAAYIIDN
HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECC
YPDAEVISDLPLQQHDCRPKTLFWQGLRLEILAPYVPKSGNNGSCVIRVSDADNSVLLTG
CCCHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEC
DIEQQAEYRLLEMTKSHDLILQSRLLIAPHHGSKTSSTESFIDAVSPELVLFPAGFRNRY
CCHHHHHHHHHHHCCCCHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC
GFPNKEVIARYQQRDILTLTAGMQGQVSVLFDQESMKVRTYRSDFAPFWYNQVFRFGQIK
CCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCEEHHHCCCCHHHHHHHHHHCCCC
NPE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8063112; 7542800 [H]