| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624383
Identifier: 167624383
GI number: 167624383
Start: 2965622
End: 2965882
Strand: Reverse
Name: 167624383
Synonym: Shal_2460
Alternate gene names: NA
Gene position: 2965882-2965622 (Counterclockwise)
Preceding gene: 167624384
Following gene: 167624382
Centisome position: 56.74
GC content: 42.53
Gene sequence:
>261_bases ATGAAATTAACTGCAGAAATTAGTTGCTACCCACTACAAGATAACTACTTAGACCCGATTAAGTGGTTTATTGCCCGTGT GGATTCCTATGACAACATCCAGCGCGTTACCAATGCGATGGCAACTCAGGTGGTCGGTGAATATGCCGATGTGATGTCCA TGCTTGCAATTGAGATGCAAGCGGCTCATGAAAAGTTTGGTAAAGCAGTGTTCGTATGCAAATTTATTGGTGGTGAGCTA AATCTAAGTCACAGCGAATAA
Upstream 100 bases:
>100_bases TGATGTAAGCATGAGTCAGAGTTGGTTAACCGGTTTTGTTGATCACTCTTTTAATTAAATAATCAAATTGAGCCACCCTT TGGTGGCTGAGGTCAATATC
Downstream 100 bases:
>100_bases ATTTATTTAGATGTGGTGGTTGTAGGATAAGAATTGCCCTGCAACCACTTATGACCTTAACAATATATGACGATGATTTA GGGCAAGGTTTCTTGTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MKLTAEISCYPLQDNYLDPIKWFIARVDSYDNIQRVTNAMATQVVGEYADVMSMLAIEMQAAHEKFGKAVFVCKFIGGEL NLSHSE
Sequences:
>Translated_86_residues MKLTAEISCYPLQDNYLDPIKWFIARVDSYDNIQRVTNAMATQVVGEYADVMSMLAIEMQAAHEKFGKAVFVCKFIGGEL NLSHSE >Mature_86_residues MKLTAEISCYPLQDNYLDPIKWFIARVDSYDNIQRVTNAMATQVVGEYADVMSMLAIEMQAAHEKFGKAVFVCKFIGGEL NLSHSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9707; Mature: 9707
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTAEISCYPLQDNYLDPIKWFIARVDSYDNIQRVTNAMATQVVGEYADVMSMLAIEMQ CCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHEKFGKAVFVCKFIGGELNLSHSE HHHHHHCCCEEEEEECCCEECCCCCC >Mature Secondary Structure MKLTAEISCYPLQDNYLDPIKWFIARVDSYDNIQRVTNAMATQVVGEYADVMSMLAIEMQ CCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHEKFGKAVFVCKFIGGELNLSHSE HHHHHHCCCEEEEEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA