Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624381

Identifier: 167624381

GI number: 167624381

Start: 2963657

End: 2964814

Strand: Reverse

Name: 167624381

Synonym: Shal_2458

Alternate gene names: NA

Gene position: 2964814-2963657 (Counterclockwise)

Preceding gene: 167624382

Following gene: 167624380

Centisome position: 56.72

GC content: 46.2

Gene sequence:

>1158_bases
ATGGCTCAAGCTTTAGCTAAAATGCTAGCGCCCTATTTTGTGCAATCAGGGCTGACAAGTGTCAGCCTTATCGCGCCCTT
GACTCAAGGGTTGAGTAATCAAAATTACTATATTCGTGGGGTTCACGCGAGTAAGCCTAATGCCGCGGAGTGGGTATTAA
GAGTCAATAGCTGGGCAAGCTCACAGATCTGCAATCGAGATGATGAAGTGTCAAATTGGCTGCTTGCAAGTGAGGAGCGG
CTCGCACCACAAATTGTCTATGTTAGTCCAGATAACAGCTTTTATTTGAGTGAGTTTTTTGCGCAAAATGAGCCAGTTTG
TTGGAGTGAGCTGATTAGTGCGAATGGGTCACACCCCCTTACCACGACCCATAATCTCTGGCCAGACGCCGAGCGAAAAT
TGCTCGAGTTATTAAATGGTTTAAAACAATTACCTCTGCCAAGCAATGTGATGAATGTCGATACGCAGTGGCAGAGATAC
CTTGCGCGTTTAACCAACATGAACCTGCAATTGACTCGCTTGCTGGGCTTATCGGATATCGAGTGCAGCGTCGCTGATGT
TATAGCTCCTCCTAGCGCGAGCGTTCATCGTTCGGACATTAAAAGTCGAGCGAGACAAAGTGTCAGTCATACAAGTGAGG
GCAATAATCTTGCCGAGCAAGCATTGTTAAGTCGTTGGCAACAGCTATATCAACAGCTTTTGGCTCAATCTCATCAGATT
GATGCCATGCTTGATAGCCTAGCTGCTTGTGTGAACAATCTGCAATTTAGCCACCGAGACTTAAACCCATATAATATTTT
GGTCGTTGAAGATAAGCTCAAATGCATTGATTTTGAATATGCCTGTCGCTCACACCCTTTATGCGATCTTGCTGCTGTGC
TTGCCAGTCATTCTCTGTCATCTGAGCAGCGCCATTGGCTGATTGACAGTTATTTAGCCACAAACCTGAACCTAAATGAC
CAGGCAAGAGATGCGGTCACTTCCGCCGTCGATCTATATTGGGTCTTCGCGGTGTGCTGGGCACTACAAATGGCTTTTGA
CAGCCTAGTAAAAGAGGGCCAGTTGATTAAACTCGATACGGGTGAAGCATATCACTTAGTCGAAGATTACCTGAACTGCG
CTCAGCAATACGATGAGTTAATAGCCTGCTGCACCTAG

Upstream 100 bases:

>100_bases
TTATTTAGGTATGGTTGTGTTTGGCTATTACATGTGGCGCAACAAAATGAAAGTGCAGAAAACAGCGCAACAAATTGATT
TAACAGCAGGTACCGCCTAA

Downstream 100 bases:

>100_bases
CTAGCGACGCTGAAAAATCAGCGAGTATCGTGGCAGACGTTAGCGTGTATCTGTGTCTGCCAATGGCTTTTTGGGTATTG
AGTTAACGTCTATTTTTACC

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: Phosphotransferase Family Protein

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MAQALAKMLAPYFVQSGLTSVSLIAPLTQGLSNQNYYIRGVHASKPNAAEWVLRVNSWASSQICNRDDEVSNWLLASEER
LAPQIVYVSPDNSFYLSEFFAQNEPVCWSELISANGSHPLTTTHNLWPDAERKLLELLNGLKQLPLPSNVMNVDTQWQRY
LARLTNMNLQLTRLLGLSDIECSVADVIAPPSASVHRSDIKSRARQSVSHTSEGNNLAEQALLSRWQQLYQQLLAQSHQI
DAMLDSLAACVNNLQFSHRDLNPYNILVVEDKLKCIDFEYACRSHPLCDLAAVLASHSLSSEQRHWLIDSYLATNLNLND
QARDAVTSAVDLYWVFAVCWALQMAFDSLVKEGQLIKLDTGEAYHLVEDYLNCAQQYDELIACCT

Sequences:

>Translated_385_residues
MAQALAKMLAPYFVQSGLTSVSLIAPLTQGLSNQNYYIRGVHASKPNAAEWVLRVNSWASSQICNRDDEVSNWLLASEER
LAPQIVYVSPDNSFYLSEFFAQNEPVCWSELISANGSHPLTTTHNLWPDAERKLLELLNGLKQLPLPSNVMNVDTQWQRY
LARLTNMNLQLTRLLGLSDIECSVADVIAPPSASVHRSDIKSRARQSVSHTSEGNNLAEQALLSRWQQLYQQLLAQSHQI
DAMLDSLAACVNNLQFSHRDLNPYNILVVEDKLKCIDFEYACRSHPLCDLAAVLASHSLSSEQRHWLIDSYLATNLNLND
QARDAVTSAVDLYWVFAVCWALQMAFDSLVKEGQLIKLDTGEAYHLVEDYLNCAQQYDELIACCT
>Mature_384_residues
AQALAKMLAPYFVQSGLTSVSLIAPLTQGLSNQNYYIRGVHASKPNAAEWVLRVNSWASSQICNRDDEVSNWLLASEERL
APQIVYVSPDNSFYLSEFFAQNEPVCWSELISANGSHPLTTTHNLWPDAERKLLELLNGLKQLPLPSNVMNVDTQWQRYL
ARLTNMNLQLTRLLGLSDIECSVADVIAPPSASVHRSDIKSRARQSVSHTSEGNNLAEQALLSRWQQLYQQLLAQSHQID
AMLDSLAACVNNLQFSHRDLNPYNILVVEDKLKCIDFEYACRSHPLCDLAAVLASHSLSSEQRHWLIDSYLATNLNLNDQ
ARDAVTSAVDLYWVFAVCWALQMAFDSLVKEGQLIKLDTGEAYHLVEDYLNCAQQYDELIACCT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43262; Mature: 43131

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQALAKMLAPYFVQSGLTSVSLIAPLTQGLSNQNYYIRGVHASKPNAAEWVLRVNSWAS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHEEEECCCCC
SQICNRDDEVSNWLLASEERLAPQIVYVSPDNSFYLSEFFAQNEPVCWSELISANGSHPL
HHHCCCCHHHHHHHHCCHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCC
TTTHNLWPDAERKLLELLNGLKQLPLPSNVMNVDTQWQRYLARLTNMNLQLTRLLGLSDI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHCCCCC
ECSVADVIAPPSASVHRSDIKSRARQSVSHTSEGNNLAEQALLSRWQQLYQQLLAQSHQI
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
DAMLDSLAACVNNLQFSHRDLNPYNILVVEDKLKCIDFEYACRSHPLCDLAAVLASHSLS
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHCCHHHHHCCCCHHHHHHHHHHHCCC
SEQRHWLIDSYLATNLNLNDQARDAVTSAVDLYWVFAVCWALQMAFDSLVKEGQLIKLDT
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
GEAYHLVEDYLNCAQQYDELIACCT
CCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQALAKMLAPYFVQSGLTSVSLIAPLTQGLSNQNYYIRGVHASKPNAAEWVLRVNSWAS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHEEEECCCCC
SQICNRDDEVSNWLLASEERLAPQIVYVSPDNSFYLSEFFAQNEPVCWSELISANGSHPL
HHHCCCCHHHHHHHHCCHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCC
TTTHNLWPDAERKLLELLNGLKQLPLPSNVMNVDTQWQRYLARLTNMNLQLTRLLGLSDI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHCCCCC
ECSVADVIAPPSASVHRSDIKSRARQSVSHTSEGNNLAEQALLSRWQQLYQQLLAQSHQI
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
DAMLDSLAACVNNLQFSHRDLNPYNILVVEDKLKCIDFEYACRSHPLCDLAAVLASHSLS
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHCCHHHHHCCCCHHHHHHHHHHHCCC
SEQRHWLIDSYLATNLNLNDQARDAVTSAVDLYWVFAVCWALQMAFDSLVKEGQLIKLDT
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
GEAYHLVEDYLNCAQQYDELIACCT
CCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA