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The map label for this gene is ydiK [H]

Identifier: 167624368

GI number: 167624368

Start: 2950497

End: 2951648

Strand: Reverse

Name: ydiK [H]

Synonym: Shal_2445

Alternate gene names: 167624368

Gene position: 2951648-2950497 (Counterclockwise)

Preceding gene: 167624369

Following gene: 167624367

Centisome position: 56.47

GC content: 45.14

Gene sequence:

>1152_bases
ATGGAAAATCCTATGCAACATAATCAAAATAAGTTGTTCATCAGCAATATGATGGAATCGGCAATAAGGATCGGCTTGCT
GTTTATTCTGATTGTTTGGACCTTCGATATTATCAAGCCATTTGTTATCCCAGTACTTTGGGGGGCGATTATAGCGGTAG
CGCTGATGCCTATTACTCAGAAACTTGAAAGGGCATTAAAAGGACGCCGCGGGCTCGCAGCGTCAATTCTTGCGTTAGCG
GGGATTATATTGCTTATTGCGCCATTCTGGATTGTTTCAAGTTCAATTTTTGATGGGGTCACACATATGATTGAAGTGTT
GCAATCAGGTGATGTAGACATTCCTGGCCCGACTCAAAAAGTCGCAGATATCCCGCTTATTGGCGATAAACTTTATGACA
TCTGGGCGTTATTTGCGACTAATTTAGAAAAAGCCGTGCTGCACTTTTTACCGCAAATTAAAACCGGAGTAACAGCCGCT
GCAGGTATGCTAGGTAGCAGCTTAGGTTCTTTAGTGATGTTTATTATTTCGCTGGCCATTGCTGGTGGTTTTATGGCGCA
TGCAGAGAAATCTGCGGCGGCAGTGAGTACTGTTGCGGTCAGAGTCGCTGGTAAGCACGGAGAAGAGTGGACGAGTTTAA
CTGCCGCCACGATTCGCAGTGTATTGCTTGGTGTGGTTGGTGTTGCGTTTATTCAAAGTATCTTGATTGGCTCGGCATTG
TTTACCTTTAGCATTCCTGCAGCAGGTATATTTACCTTTATCGTGTTCATTTTGGGCATTGCTCAATTGCCGCCATTATT
AGTGGTATTACCGCTTATTTTCTATGTGTTCTCAACTCATGACTCGACGCCAGCAACCATATTTACAGTGTGGGTGCTGA
TCGCCGGTATTTCAGATAGTTTCTTAAAGCCTATGCTGATGGGGCGTGGGGTAGATGTGCCTATGCCGGTTATTCTAATT
GGTGCGATTGGTGGCATGATCACAGCTGGTATCATTGGCTTGTTCTTAGGGGCGGTTATTTTGGCTATTTGGTATGAGCT
GTTTATAACTTGGCTAAAAACCGAAGAGGAGGCAACGACAGGCTCCCAAGCGCTTAACAAGGCCGAAGATAAGCTGGTGA
CGGCTCCTGGTCATGATGGCGCCAATGAGTAA

Upstream 100 bases:

>100_bases
TATATGGAGGCCATTGCCGGCGTGTTTTACATGGCGATTGTCGTGGCAAGTTTGGTGAGTGCTGGATTGGCACAGAAATC
AACCCAACAGGAAGGTTAAT

Downstream 100 bases:

>100_bases
GCGTTTGTTGCGATAATGAGTTAAATCACATAAGGGTGCCATTGTGCACCTTTTTTATTGGCTCTCGATTATAATTGTCT
GGCATAGACGTCAATATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MENPMQHNQNKLFISNMMESAIRIGLLFILIVWTFDIIKPFVIPVLWGAIIAVALMPITQKLERALKGRRGLAASILALA
GIILLIAPFWIVSSSIFDGVTHMIEVLQSGDVDIPGPTQKVADIPLIGDKLYDIWALFATNLEKAVLHFLPQIKTGVTAA
AGMLGSSLGSLVMFIISLAIAGGFMAHAEKSAAAVSTVAVRVAGKHGEEWTSLTAATIRSVLLGVVGVAFIQSILIGSAL
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPLIFYVFSTHDSTPATIFTVWVLIAGISDSFLKPMLMGRGVDVPMPVILI
GAIGGMITAGIIGLFLGAVILAIWYELFITWLKTEEEATTGSQALNKAEDKLVTAPGHDGANE

Sequences:

>Translated_383_residues
MENPMQHNQNKLFISNMMESAIRIGLLFILIVWTFDIIKPFVIPVLWGAIIAVALMPITQKLERALKGRRGLAASILALA
GIILLIAPFWIVSSSIFDGVTHMIEVLQSGDVDIPGPTQKVADIPLIGDKLYDIWALFATNLEKAVLHFLPQIKTGVTAA
AGMLGSSLGSLVMFIISLAIAGGFMAHAEKSAAAVSTVAVRVAGKHGEEWTSLTAATIRSVLLGVVGVAFIQSILIGSAL
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPLIFYVFSTHDSTPATIFTVWVLIAGISDSFLKPMLMGRGVDVPMPVILI
GAIGGMITAGIIGLFLGAVILAIWYELFITWLKTEEEATTGSQALNKAEDKLVTAPGHDGANE
>Mature_383_residues
MENPMQHNQNKLFISNMMESAIRIGLLFILIVWTFDIIKPFVIPVLWGAIIAVALMPITQKLERALKGRRGLAASILALA
GIILLIAPFWIVSSSIFDGVTHMIEVLQSGDVDIPGPTQKVADIPLIGDKLYDIWALFATNLEKAVLHFLPQIKTGVTAA
AGMLGSSLGSLVMFIISLAIAGGFMAHAEKSAAAVSTVAVRVAGKHGEEWTSLTAATIRSVLLGVVGVAFIQSILIGSAL
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPLIFYVFSTHDSTPATIFTVWVLIAGISDSFLKPMLMGRGVDVPMPVILI
GAIGGMITAGIIGLFLGAVILAIWYELFITWLKTEEEATTGSQALNKAEDKLVTAPGHDGANE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=334, Percent_Identity=32.6347305389222, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40783; Mature: 40783

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCEEECCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]