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The map label for this gene is mmgC [H]

Identifier: 167624357

GI number: 167624357

Start: 2938866

End: 2940656

Strand: Reverse

Name: mmgC [H]

Synonym: Shal_2434

Alternate gene names: 167624357

Gene position: 2940656-2938866 (Counterclockwise)

Preceding gene: 167624359

Following gene: 167624356

Centisome position: 56.26

GC content: 48.13

Gene sequence:

>1791_bases
ATGCCTATTTACCAAGCGCCAATACGTGATTACCAGTTTATTTTAGGCGAACTGCTTAATATTTATCAGCAAGATCACTT
AACAGGGTTCGATGAGTTTGATCCAGAGCTGATTGATACCGTACTGCAAGGCGTTGCAGACTTCACCACCGATATTATGC
TGCCATTAAATGGCAGTGGTGATATTGAGGGATGCCGTTTGCAAGATGGTAAGGTCGTAACCCCTAAAGGTTTTATTGAA
GCCTACCAACAATATGTCGATAACGGCTGGGCGACATTAACCTGTGATCCTGAGTTTGGCGGCCAAGGGTTGCCCGAAGT
GGTCGGTGTTTTTGCCACCGAAATGAAAACTTCAACCAACATGGCATTTGCCATGTATCCCGGACTCACTCATGGTGCTT
ACGCTGCCATTCATGCCCACGGTAGTGATGAGTTAAAAGCCAAGTATTTAGAAAAGTTAGTCAGTGGTGAGTGGACTGGC
ACCATGAATTTAACTGAGTCCCATGCGGGTACCGACTTGGCATTGTTACGCACTAAAGCCGTACCAGCAAGCGAGGGCTC
GTTCGCCATTACTGGGGAGAAGATCTTTATCTCCTCTGGCGATCATGACTTAACCGACAATATTGTGCATTTAGTGTTAG
CAAGGTTACCGGACGCGCCAGAGGGCGTAAAAGGGATCTCGCTGTTTGTCGTGCCTAAGGTACTGATTAACGATGACGGT
AGTTTAGGTGAACTCAACAGTCTTTATGCAGCAAGCCTTGAGCATAAAATGGGGATCCACGGTAACTCGACCTGTGTGAT
GAACTTTGATGGCGCCATCGGCGAGCTGGTGGGCGAGCCGCATCAGGGTCTTCGCGCCATGTTCACCATGATGAATCAAG
CTAGACTGGGAGTGGGAGTTCAAGGATTAGGCGTGTCTGAAATCGCCTATCAAAATGCCTTAGCGTATGCCAAAGATCGT
ATTCAAGGCCGTGCATTGAGCGGCGTTAAGCAAGCAGCGCAAGCGGCTGACTCCATTCTGGTACATGGTGATGTGCGCCG
AATGTTATTGTCACAAAAAGCCTTTAATGAAGGCACTCGTGCACTAATGGGGCAACAGGCGCTCTGGCTCGATGAAGCCG
AAAGACACAGTTCTCCTGAACAGGCCAAAGCTGCGTCAAAGCTTGCCGCACTGTTTACGCCCATCGTGAAAGGCTTTGTG
ACTGACCAAGGGTTTAAGGCTTGTGTCGATGCTCAGCAAGTATTTGGCGGGCATGGTTATATTCATGAATGGGGGATGGA
GCAATTTGTACGTGATAGTCGTATTGCGATGATCTATGAAGGCACCAATGGTGTACAGGCGTTAGATCTTGTCGGGCGAA
AAATACTGTCTGATAAAGCGCAGACTCTGCAGCTATGGTCCGAACAAGTTAAACTGCTTATTCAACGTAATATGGGTAAT
GATGCAATGAAGCCCTATATCGCAGGCTTAATGGATGCGGCGGGCGATCTTGAAAAGGCCACGGGTTACATTGCGGAAAA
TGCGGCTAAAAACCCCGATATTATCGGTGCAGCCTCCATGGCATATATGCAGATCTTAGGGATTACGGCGCTGGGGTGGA
TGTGGACTCGAATCGCCGAAAAAGCCCTGCATCAATTGGCTGAAGGCGCAGAAGAGAAGGCGTTTTATCAGGACAAGTTG
AAAACAGCTGAATTTTATATGGGCTATTGGGCTGTGCAGACTCGAAGCTTACGCAAACAAATACAGGCGGCAAGCGCTGA
AATTGTCGCATTTGAGGATAGTGCATTCTAA

Upstream 100 bases:

>100_bases
AAGTGAAAATGTTGCTGAGTTTTTACTCAAACTTGGTTATGGTGGTCAGAGCACTGACCATTACTAATAACGACTAATAA
GAAATGAAAGGGATGACACT

Downstream 100 bases:

>100_bases
GGATGGCTGCACTTTGCAAATGCCCCCCTCTATTACTTATGCTAATAGAGGGGGGTTGTCTTTAGGCCTAACCCATCGAC
ATTAAGCCGTTTTTTTATAG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MPIYQAPIRDYQFILGELLNIYQQDHLTGFDEFDPELIDTVLQGVADFTTDIMLPLNGSGDIEGCRLQDGKVVTPKGFIE
AYQQYVDNGWATLTCDPEFGGQGLPEVVGVFATEMKTSTNMAFAMYPGLTHGAYAAIHAHGSDELKAKYLEKLVSGEWTG
TMNLTESHAGTDLALLRTKAVPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPEGVKGISLFVVPKVLINDDG
SLGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPHQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDR
IQGRALSGVKQAAQAADSILVHGDVRRMLLSQKAFNEGTRALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFV
TDQGFKACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKAQTLQLWSEQVKLLIQRNMGN
DAMKPYIAGLMDAAGDLEKATGYIAENAAKNPDIIGAASMAYMQILGITALGWMWTRIAEKALHQLAEGAEEKAFYQDKL
KTAEFYMGYWAVQTRSLRKQIQAASAEIVAFEDSAF

Sequences:

>Translated_596_residues
MPIYQAPIRDYQFILGELLNIYQQDHLTGFDEFDPELIDTVLQGVADFTTDIMLPLNGSGDIEGCRLQDGKVVTPKGFIE
AYQQYVDNGWATLTCDPEFGGQGLPEVVGVFATEMKTSTNMAFAMYPGLTHGAYAAIHAHGSDELKAKYLEKLVSGEWTG
TMNLTESHAGTDLALLRTKAVPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPEGVKGISLFVVPKVLINDDG
SLGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPHQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDR
IQGRALSGVKQAAQAADSILVHGDVRRMLLSQKAFNEGTRALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFV
TDQGFKACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKAQTLQLWSEQVKLLIQRNMGN
DAMKPYIAGLMDAAGDLEKATGYIAENAAKNPDIIGAASMAYMQILGITALGWMWTRIAEKALHQLAEGAEEKAFYQDKL
KTAEFYMGYWAVQTRSLRKQIQAASAEIVAFEDSAF
>Mature_595_residues
PIYQAPIRDYQFILGELLNIYQQDHLTGFDEFDPELIDTVLQGVADFTTDIMLPLNGSGDIEGCRLQDGKVVTPKGFIEA
YQQYVDNGWATLTCDPEFGGQGLPEVVGVFATEMKTSTNMAFAMYPGLTHGAYAAIHAHGSDELKAKYLEKLVSGEWTGT
MNLTESHAGTDLALLRTKAVPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPEGVKGISLFVVPKVLINDDGS
LGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPHQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRI
QGRALSGVKQAAQAADSILVHGDVRRMLLSQKAFNEGTRALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFVT
DQGFKACVDAQQVFGGHGYIHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKAQTLQLWSEQVKLLIQRNMGND
AMKPYIAGLMDAAGDLEKATGYIAENAAKNPDIIGAASMAYMQILGITALGWMWTRIAEKALHQLAEGAEEKAFYQDKLK
TAEFYMGYWAVQTRSLRKQIQAASAEIVAFEDSAF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=446, Percent_Identity=24.6636771300448, Blast_Score=107, Evalue=5e-23,
Organism=Homo sapiens, GI21361497, Length=310, Percent_Identity=24.8387096774194, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4557235, Length=350, Percent_Identity=27.7142857142857, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI76496475, Length=350, Percent_Identity=27.7142857142857, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4557233, Length=451, Percent_Identity=26.3858093126386, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4501857, Length=342, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI226958412, Length=392, Percent_Identity=23.7244897959184, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI226958414, Length=388, Percent_Identity=23.7113402061856, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI7656849, Length=365, Percent_Identity=25.4794520547945, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4557231, Length=330, Percent_Identity=25.1515151515152, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI187960098, Length=330, Percent_Identity=25.1515151515152, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI87082384, Length=353, Percent_Identity=27.1954674220963, Blast_Score=102, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI86563381, Length=361, Percent_Identity=27.1468144044321, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=361, Percent_Identity=27.1468144044321, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=365, Percent_Identity=27.3972602739726, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=375, Percent_Identity=25.0666666666667, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=381, Percent_Identity=25.7217847769029, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=345, Percent_Identity=26.0869565217391, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=373, Percent_Identity=24.1286863270777, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=422, Percent_Identity=26.0663507109005, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=374, Percent_Identity=22.9946524064171, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=24.6684350132626, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=185, Percent_Identity=29.1891891891892, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71985192, Length=248, Percent_Identity=25.4032258064516, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71982178, Length=237, Percent_Identity=28.6919831223629, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=27.3913043478261, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=26.0526315789474, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI21356377, Length=364, Percent_Identity=26.6483516483516, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281363737, Length=331, Percent_Identity=25.0755287009063, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24646207, Length=368, Percent_Identity=24.7282608695652, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24660351, Length=315, Percent_Identity=26.3492063492064, Blast_Score=77, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64808; Mature: 64676

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYQAPIRDYQFILGELLNIYQQDHLTGFDEFDPELIDTVLQGVADFTTDIMLPLNGSG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
DIEGCRLQDGKVVTPKGFIEAYQQYVDNGWATLTCDPEFGGQGLPEVVGVFATEMKTSTN
CCCCEEECCCEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
MAFAMYPGLTHGAYAAIHAHGSDELKAKYLEKLVSGEWTGTMNLTESHAGTDLALLRTKA
EEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECC
VPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPEGVKGISLFVVPKVLINDDG
CCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCC
SLGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPHQGLRAMFTMMNQARLGVGV
CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
QGLGVSEIAYQNALAYAKDRIQGRALSGVKQAAQAADSILVHGDVRRMLLSQKAFNEGTR
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
ALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFVTDQGFKACVDAQQVFGGHGY
HHHCCHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
IHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKAQTLQLWSEQVKLLIQRNMGN
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAMKPYIAGLMDAAGDLEKATGYIAENAAKNPDIIGAASMAYMQILGITALGWMWTRIAE
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KALHQLAEGAEEKAFYQDKLKTAEFYMGYWAVQTRSLRKQIQAASAEIVAFEDSAF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure 
PIYQAPIRDYQFILGELLNIYQQDHLTGFDEFDPELIDTVLQGVADFTTDIMLPLNGSG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
DIEGCRLQDGKVVTPKGFIEAYQQYVDNGWATLTCDPEFGGQGLPEVVGVFATEMKTSTN
CCCCEEECCCEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
MAFAMYPGLTHGAYAAIHAHGSDELKAKYLEKLVSGEWTGTMNLTESHAGTDLALLRTKA
EEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECC
VPASEGSFAITGEKIFISSGDHDLTDNIVHLVLARLPDAPEGVKGISLFVVPKVLINDDG
CCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCC
SLGELNSLYAASLEHKMGIHGNSTCVMNFDGAIGELVGEPHQGLRAMFTMMNQARLGVGV
CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
QGLGVSEIAYQNALAYAKDRIQGRALSGVKQAAQAADSILVHGDVRRMLLSQKAFNEGTR
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
ALMGQQALWLDEAERHSSPEQAKAASKLAALFTPIVKGFVTDQGFKACVDAQQVFGGHGY
HHHCCHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
IHEWGMEQFVRDSRIAMIYEGTNGVQALDLVGRKILSDKAQTLQLWSEQVKLLIQRNMGN
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAMKPYIAGLMDAAGDLEKATGYIAENAAKNPDIIGAASMAYMQILGITALGWMWTRIAE
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KALHQLAEGAEEKAFYQDKLKTAEFYMGYWAVQTRSLRKQIQAASAEIVAFEDSAF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]