Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624285

Identifier: 167624285

GI number: 167624285

Start: 2858156

End: 2860204

Strand: Reverse

Name: 167624285

Synonym: Shal_2361

Alternate gene names: NA

Gene position: 2860204-2858156 (Counterclockwise)

Preceding gene: 167624286

Following gene: 167624284

Centisome position: 54.72

GC content: 44.75

Gene sequence:

>2049_bases
ATGAAAAAGGTTAAAAACGGCTTAAATAAGTCGACGCTCGCTTTGGGGATAGTCGCGGCGCTCGGTTTTGGCATGACAAA
CCATGCTAATGCAATCTCATTCAATTGGGGTGAGGTGGAAGGAACATTCGATTCTACTTGGACTGCTGGTGCAAGTTGGC
GCGTTGAAGGCAGAGATTGGGATAATCAGATCGGTAAGGTGAATCATCCTCGTTTTGATTGGTCAGGTTACTCTGCTTTT
AGCGATACTAAATACAGTTCAGCCGAGATTTGGGCACAACCTGGGTCTTATTCGAGTAATGGCGATTTAGCCGATCTGCT
ATATACCCAAGGCGATACCACTGCAGAAATTTTTAAAGGCTTACATGAACTTTCTCTAAAGTATAAGAATTTTGGTGTTT
TTGCTCGCGGAATGTATTTCTATGACCGTAAAGCTAATGATGGCGATTATGGTTATAGCAATCCATTAACAGGCAAAGAG
TACGATCCTTGTGAAGATAAGAAAGCTTCTGAAGTTCAATGTAAAGATATTCGCCTACTAGATGCTTTTGTTTATGCCGA
TTTTGATTTTAACGGTGGTGCAAACCCTCTTTCAATACGAGTGGGTGATCAGGTTGTCTCGTGGGGAGAAAGCACACTGA
TTGCACACGGTATTGGTGTCATCAATCCAGTCGATCTGAATATTCTTAATGCGCCTGGTGCTGAATTAAAAGAAGCATTT
AGGCCTCAAGGAATGGTTTGGGCGTCTTTTGGTATTACAGATAATTTGTCTGTTGAAGGTTTTTATCAATATGATTGGGA
GCCTGTTTGGGTTCCAACACCAGGATCATTTCTTTCTACAAATGATTTTGCAGGTTACGGCGGTTATTACCAAAATGCAC
AGTTAGGCTTTAATGCCAACCCTGACATGGATCTTAATTTCCTCCTATCTGAATATAATGCCCTTGTTGGCATGGTCGGG
TCGGGTCAGGTTAACTCGAGCGACTTAGCAAGCCTTGCACTCGCTTATCCAACTAAAGCAACATTAGTAGAAGATCCTGC
ATCGGCGAGTGATGACGGCCAATGGGGTGTGAAGCTTGGGTATTATGCACCACAACTTGGCGAGACCGAGTTTGGCTTGT
ACTACATGAACTATCATAGTCGTCGTCCGCTAATCAGCGGTACCACGGCGAACTTTACCGAAGAAGCTATTGGCCGAGAC
CTGCAGCGACTCGGCGGTAAAGCACAGTCTGGCGAAGCCATGACTCGTGAAGATCTGCTAGCGTTAGAGACGTTCTCAAA
AGCACAGATAGTATATCCAGAAGATATTCAACTGATGGGCGTTAGCTTTAATACGCTTGTTGGTGATACTTCCGTTGCCG
GTGAAATAGCTCACCGCCTTGATGAGCCATTGCAGATTGATGATGTTGAATTGTTGTTTGCCGCAATGCCACAGCAGCTG
GCTAATGCAGGTATTCGTCCTGATTTCGATGGTATTTCACAAGTTGAAAACTATGGGCCGGGGGAATACGCCGAAGGCTT
TATTCGTCTTGATACCACTCAAGCACAAACTACCTTTACCCATCTATTCGGCCCGACTCTTGGTACCGACAACTTAACTA
TGTTGGCTGAGGTTGGTGGTGTGTGGATCCACGATATGCCGAGTCATGATGAGCTTAGACTTAACGGTCCTGGAACATCG
CGCTCTGGTGGAAATCCCGACATGCCAGGCATTATTGAAGCCTTACATAATGGCCCTGAGGTTAATCCTTTCCCGACTGA
TTTTGCTTGGGGTTATCGTTTAGTGGCTAAAGCTGATTACAACAACGTTTGGGGGGGAGTGAATATTGCGCCACGAGTGA
TCTTCTCTCACGACGTTGATGGTATTACGCCTGACCCGATGTTCTTGTTTACTGAGGGTAAAAAATCAGTGGCATTAGGC
ATTAACTTTGACTATCAAAGTCGCTGGGGCGCCGATATTTCTTATAACACCTTCTTTGGTGGAGTAGGGACGACCAACTC
TTTGGCTGACCGAGATTATGTTTCGTTCAACATTAAGTATTCAATCTAA

Upstream 100 bases:

>100_bases
GTGTAAATGCTGTAACAATGGTGTCACCTGTAAGTTAACAGTTTGTTGGCTATCAATTCCTATAACAAAAGAATCCAGCA
GGTTACGGAGAGAAGCTAAA

Downstream 100 bases:

>100_bases
ATCACAAGGACAATAACAATGAATAAACTTGCGATATTGCCTGTAGCAGTGATGTTTGCCCTAAGTGCTCAAGCGGCATT
GGCTAAAGTCTCTGAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MKKVKNGLNKSTLALGIVAALGFGMTNHANAISFNWGEVEGTFDSTWTAGASWRVEGRDWDNQIGKVNHPRFDWSGYSAF
SDTKYSSAEIWAQPGSYSSNGDLADLLYTQGDTTAEIFKGLHELSLKYKNFGVFARGMYFYDRKANDGDYGYSNPLTGKE
YDPCEDKKASEVQCKDIRLLDAFVYADFDFNGGANPLSIRVGDQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF
RPQGMVWASFGITDNLSVEGFYQYDWEPVWVPTPGSFLSTNDFAGYGGYYQNAQLGFNANPDMDLNFLLSEYNALVGMVG
SGQVNSSDLASLALAYPTKATLVEDPASASDDGQWGVKLGYYAPQLGETEFGLYYMNYHSRRPLISGTTANFTEEAIGRD
LQRLGGKAQSGEAMTREDLLALETFSKAQIVYPEDIQLMGVSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL
ANAGIRPDFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGGVWIHDMPSHDELRLNGPGTS
RSGGNPDMPGIIEALHNGPEVNPFPTDFAWGYRLVAKADYNNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALG
INFDYQSRWGADISYNTFFGGVGTTNSLADRDYVSFNIKYSI

Sequences:

>Translated_682_residues
MKKVKNGLNKSTLALGIVAALGFGMTNHANAISFNWGEVEGTFDSTWTAGASWRVEGRDWDNQIGKVNHPRFDWSGYSAF
SDTKYSSAEIWAQPGSYSSNGDLADLLYTQGDTTAEIFKGLHELSLKYKNFGVFARGMYFYDRKANDGDYGYSNPLTGKE
YDPCEDKKASEVQCKDIRLLDAFVYADFDFNGGANPLSIRVGDQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF
RPQGMVWASFGITDNLSVEGFYQYDWEPVWVPTPGSFLSTNDFAGYGGYYQNAQLGFNANPDMDLNFLLSEYNALVGMVG
SGQVNSSDLASLALAYPTKATLVEDPASASDDGQWGVKLGYYAPQLGETEFGLYYMNYHSRRPLISGTTANFTEEAIGRD
LQRLGGKAQSGEAMTREDLLALETFSKAQIVYPEDIQLMGVSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL
ANAGIRPDFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGGVWIHDMPSHDELRLNGPGTS
RSGGNPDMPGIIEALHNGPEVNPFPTDFAWGYRLVAKADYNNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALG
INFDYQSRWGADISYNTFFGGVGTTNSLADRDYVSFNIKYSI
>Mature_682_residues
MKKVKNGLNKSTLALGIVAALGFGMTNHANAISFNWGEVEGTFDSTWTAGASWRVEGRDWDNQIGKVNHPRFDWSGYSAF
SDTKYSSAEIWAQPGSYSSNGDLADLLYTQGDTTAEIFKGLHELSLKYKNFGVFARGMYFYDRKANDGDYGYSNPLTGKE
YDPCEDKKASEVQCKDIRLLDAFVYADFDFNGGANPLSIRVGDQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF
RPQGMVWASFGITDNLSVEGFYQYDWEPVWVPTPGSFLSTNDFAGYGGYYQNAQLGFNANPDMDLNFLLSEYNALVGMVG
SGQVNSSDLASLALAYPTKATLVEDPASASDDGQWGVKLGYYAPQLGETEFGLYYMNYHSRRPLISGTTANFTEEAIGRD
LQRLGGKAQSGEAMTREDLLALETFSKAQIVYPEDIQLMGVSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL
ANAGIRPDFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGGVWIHDMPSHDELRLNGPGTS
RSGGNPDMPGIIEALHNGPEVNPFPTDFAWGYRLVAKADYNNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALG
INFDYQSRWGADISYNTFFGGVGTTNSLADRDYVSFNIKYSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74639; Mature: 74639

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVKNGLNKSTLALGIVAALGFGMTNHANAISFNWGEVEGTFDSTWTAGASWRVEGRDW
CCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCEEEECCCCC
DNQIGKVNHPRFDWSGYSAFSDTKYSSAEIWAQPGSYSSNGDLADLLYTQGDTTAEIFKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCHHHHHHH
LHELSLKYKNFGVFARGMYFYDRKANDGDYGYSNPLTGKEYDPCEDKKASEVQCKDIRLL
HHHHHEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE
DAFVYADFDFNGGANPLSIRVGDQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF
EEEEEEEECCCCCCCEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHH
RPQGMVWASFGITDNLSVEGFYQYDWEPVWVPTPGSFLSTNDFAGYGGYYQNAQLGFNAN
CCCCEEEEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCC
PDMDLNFLLSEYNALVGMVGSGQVNSSDLASLALAYPTKATLVEDPASASDDGQWGVKLG
CCCCHHHHHHHHHHHEEECCCCCCCHHHHHHEEEECCCCCEEEECCCCCCCCCCCCEEEE
YYAPQLGETEFGLYYMNYHSRRPLISGTTANFTEEAIGRDLQRLGGKAQSGEAMTREDLL
CCCCCCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ALETFSKAQIVYPEDIQLMGVSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL
HHCCCCCEEEECCCCEEEEEEEHHHEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ANAGIRPDFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGG
HHCCCCCCCCCHHHHHCCCCCHHCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCC
VWIHDMPSHDELRLNGPGTSRSGGNPDMPGIIEALHNGPEVNPFPTDFAWGYRLVAKADY
EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
NNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALGINFDYQSRWGADISYNTFFG
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCEEECEEEC
GVGTTNSLADRDYVSFNIKYSI
CCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKVKNGLNKSTLALGIVAALGFGMTNHANAISFNWGEVEGTFDSTWTAGASWRVEGRDW
CCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCEEEECCCCC
DNQIGKVNHPRFDWSGYSAFSDTKYSSAEIWAQPGSYSSNGDLADLLYTQGDTTAEIFKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCHHHHHHH
LHELSLKYKNFGVFARGMYFYDRKANDGDYGYSNPLTGKEYDPCEDKKASEVQCKDIRLL
HHHHHEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE
DAFVYADFDFNGGANPLSIRVGDQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF
EEEEEEEECCCCCCCEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHH
RPQGMVWASFGITDNLSVEGFYQYDWEPVWVPTPGSFLSTNDFAGYGGYYQNAQLGFNAN
CCCCEEEEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCC
PDMDLNFLLSEYNALVGMVGSGQVNSSDLASLALAYPTKATLVEDPASASDDGQWGVKLG
CCCCHHHHHHHHHHHEEECCCCCCCHHHHHHEEEECCCCCEEEECCCCCCCCCCCCEEEE
YYAPQLGETEFGLYYMNYHSRRPLISGTTANFTEEAIGRDLQRLGGKAQSGEAMTREDLL
CCCCCCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ALETFSKAQIVYPEDIQLMGVSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL
HHCCCCCEEEECCCCEEEEEEEHHHEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ANAGIRPDFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGG
HHCCCCCCCCCHHHHHCCCCCHHCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCC
VWIHDMPSHDELRLNGPGTSRSGGNPDMPGIIEALHNGPEVNPFPTDFAWGYRLVAKADY
EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
NNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALGINFDYQSRWGADISYNTFFG
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCEEECEEEC
GVGTTNSLADRDYVSFNIKYSI
CCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA