Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is pcaD [H]

Identifier: 167624236

GI number: 167624236

Start: 2796521

End: 2797369

Strand: Direct

Name: pcaD [H]

Synonym: Shal_2312

Alternate gene names: 167624236

Gene position: 2796521-2797369 (Clockwise)

Preceding gene: 167624235

Following gene: 167624237

Centisome position: 53.5

GC content: 43.35

Gene sequence:

>849_bases
GTGAACATTACCGACTTAACCAACAATTTTGCAGCAAACAGACACCAACTCAACATTGGCGGTAGCACGCTAAGCTATCT
AGATATTGGCCAAGGGCCCGTGTTATTAATGGGCCATAGTTATCTTTGGGATGCCAAGATGTGGGCGCCACAGATAGCCC
ACTTGAGTCAAAACTATCGTTGTATAGTGCCAGATCTATGGGGCCATGGTTTATCGGCTAACTTACCTGCAAAAACAAGC
AACCTGCGTGATATTGCAGCTCAAATGCTTGAGCTCATGGATAAACTAAACGTAGATAAATTTTCTGTGATAGGCTTATC
TGTTGGCGCAATGTGGGGAGCGGAGCTTGCCCTTAAGGCTCCTACGCGAGTACAACACCTCGTCATGTTAGGTAGTTTTA
TCGGATATGAGCCAGAGATCACCCGCGATAAATATTATGCCATGCTCGAAGTCATCAAGAATGAACAAATCATTTCAGAC
AAAATCATCGACACGATTACGCCTCTTTTTTTTGCAAATCATCCCAACGCCGAATTGGTCGAAGTTTTCAAACAAAAGCT
AAAACATTTTGACAGCAGTAATATCGACAACCTATATCAGATAGGCAGAATGATTTTCGGCCGTCGCGATACCATGGATG
ATGTGCATTTACTAACACTTCCCTGCTTAATCATGACTGGAGTCGAAGATAAAGCGCGCACCGTATTAGAAGGCTATTTG
ATGCATGATGCCATCGATGGTAGCGAATACGTACATATTCCCGATTGCGGCCATATTTCAACCTTAGAGCAAGCCGAATT
TATCAATCAACGTCTTAGCAGCTTTTTATCCGCTAATGCACGAGCATAA

Upstream 100 bases:

>100_bases
CCACTCGTTAATGAGTATGTGTTACGTGTCGCTCCAGTACCCACACTGAAACAGCCACTCACTGAAACCTGATTTATTCA
CACATATTAGAGATAACACT

Downstream 100 bases:

>100_bases
ATGAGCCAGGACTCAGCGCTCAAACTCATAGATCTGACTCAGTGCTTAGGCTTCAGCAACACATGTTCAAATCAACCTAA
TGACAACGCACAAGCAGGAA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNITDLTNNFAANRHQLNIGGSTLSYLDIGQGPVLLMGHSYLWDAKMWAPQIAHLSQNYRCIVPDLWGHGLSANLPAKTS
NLRDIAAQMLELMDKLNVDKFSVIGLSVGAMWGAELALKAPTRVQHLVMLGSFIGYEPEITRDKYYAMLEVIKNEQIISD
KIIDTITPLFFANHPNAELVEVFKQKLKHFDSSNIDNLYQIGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVLEGYL
MHDAIDGSEYVHIPDCGHISTLEQAEFINQRLSSFLSANARA

Sequences:

>Translated_282_residues
MNITDLTNNFAANRHQLNIGGSTLSYLDIGQGPVLLMGHSYLWDAKMWAPQIAHLSQNYRCIVPDLWGHGLSANLPAKTS
NLRDIAAQMLELMDKLNVDKFSVIGLSVGAMWGAELALKAPTRVQHLVMLGSFIGYEPEITRDKYYAMLEVIKNEQIISD
KIIDTITPLFFANHPNAELVEVFKQKLKHFDSSNIDNLYQIGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVLEGYL
MHDAIDGSEYVHIPDCGHISTLEQAEFINQRLSSFLSANARA
>Mature_282_residues
MNITDLTNNFAANRHQLNIGGSTLSYLDIGQGPVLLMGHSYLWDAKMWAPQIAHLSQNYRCIVPDLWGHGLSANLPAKTS
NLRDIAAQMLELMDKLNVDKFSVIGLSVGAMWGAELALKAPTRVQHLVMLGSFIGYEPEITRDKYYAMLEVIKNEQIISD
KIIDTITPLFFANHPNAELVEVFKQKLKHFDSSNIDNLYQIGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVLEGYL
MHDAIDGSEYVHIPDCGHISTLEQAEFINQRLSSFLSANARA

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 31647; Mature: 31647

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITDLTNNFAANRHQLNIGGSTLSYLDIGQGPVLLMGHSYLWDAKMWAPQIAHLSQNYR
CCCCCCCHHHCCCCEEEEECCCEEEEEECCCCCEEEECCCHHCCHHHHHHHHHHHCCCCE
CIVPDLWGHGLSANLPAKTSNLRDIAAQMLELMDKLNVDKFSVIGLSVGAMWGAELALKA
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCHHEECC
PTRVQHLVMLGSFIGYEPEITRDKYYAMLEVIKNEQIISDKIIDTITPLFFANHPNAELV
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHH
EVFKQKLKHFDSSNIDNLYQIGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVLEGYL
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
MHDAIDGSEYVHIPDCGHISTLEQAEFINQRLSSFLSANARA
HHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNITDLTNNFAANRHQLNIGGSTLSYLDIGQGPVLLMGHSYLWDAKMWAPQIAHLSQNYR
CCCCCCCHHHCCCCEEEEECCCEEEEEECCCCCEEEECCCHHCCHHHHHHHHHHHCCCCE
CIVPDLWGHGLSANLPAKTSNLRDIAAQMLELMDKLNVDKFSVIGLSVGAMWGAELALKA
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCHHEECC
PTRVQHLVMLGSFIGYEPEITRDKYYAMLEVIKNEQIISDKIIDTITPLFFANHPNAELV
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHH
EVFKQKLKHFDSSNIDNLYQIGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVLEGYL
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
MHDAIDGSEYVHIPDCGHISTLEQAEFINQRLSSFLSANARA
HHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8181753 [H]