Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624200

Identifier: 167624200

GI number: 167624200

Start: 2759782

End: 2761008

Strand: Reverse

Name: 167624200

Synonym: Shal_2276

Alternate gene names: NA

Gene position: 2761008-2759782 (Counterclockwise)

Preceding gene: 167624201

Following gene: 167624199

Centisome position: 52.82

GC content: 38.88

Gene sequence:

>1227_bases
ATGGATAAACCGCTTGAGCTATGTGTCTCGAATAATAACCAAGAATCACCTATGTCTTTTTGTCTAGCGTTTCCTGTGCA
GGCGATTGTGGCAAGTTGTGGTCATCAGTCGCTTAGTTGGTTAAGTGAAAGCCTAAACCAGTTCGAAAATCTAAAGTGGC
AGTCTGCGTCATATGAAGATCAGCATTTAGTAAAAGATAAAAGTAACTTCAACCTCGTGTTATTGGTACTCCCCTCTGAA
GAGGTCGAGGCAGAGAAAGCGTTAGCATATGCAGCTAATTTCGATTGCGACATTATATTGGTAGGCCACGATACTCCACA
GAATATTTTAAGATTGGCATTTCAATATGATGTCAGTGACTTTATCCCTTCAAGTTCGCAGTCAAATGAACTATTTAGCT
CTTTGGAAAAAGTATCTAACCGTCTTGTAAAGAATGCTGATTTGGCACCTGTAGTTGCTATTATAAATGGTAAGGCAGGC
TCGGGAGCAAGCTTTCTATCCGCAAGCTTAGCTGATGTCGTCTCTCAAAGAGAAGGCAGCGATCTCGCACTATTAGATAT
GGATCTTCACCATGGTACATTGGCACATATTCTTGGGTGCGACGCTAAATACTCGATTTGTGATGTGCTTGGTACGATTG
AAGACCTCGATGAGATCGCGCTAAAAAGCACGATGACTAAGAATGGAAACTTGAGCCTTCTCGCGGCAAAACCTTTTGAG
CTTCTGACTCTAGACGAAGAGGTTGACTTTAACCGCATTAAAGAACTTATTTGGAAATACCGTCAGTTTTATAAACAGGT
TATTTTAGACTTTTCTAGAGGCCCTGAAGATTGGAATTGTGATCTATTATTGAATGCGACGATATTGATCGTTACTCAAC
AGAATATAATGCACTTGCGTCAAACCAAAGATTTAATTTTTCAATTGACTAAAAATATGGGTATTGCTTCAGAGCAAATT
AACTTGGTTGTTAATCGATATAACAAAAACTCCAATATAAAGTTATCAGATATTAAAGAGGCGTTAGGTATATCAAGTAT
AAGTACCGTCATCAACGATTATAAGTTATCAAACGAGTGTGTAGATCTTGGTAAGCCCCTGACTGAAGTTGCAAGGAAAC
AAAAGATAGTCACCGATGTGCGTTTTTTAGCTGATAAGTTTCTACCCATTAGTAGCGAGCAAGATAAAACTGGAACAACT
TTTTGGAAGCGTCTTTTAGGAAACTAA

Upstream 100 bases:

>100_bases
GTAGTTAATTCTTTTTCAATCAATAGGTAAATAATCAAATAGCTTAAGGAATGTTGTCTATAGTAAATATAGCTGTATTA
AAAAGGGAGGTAGGTGCGCA

Downstream 100 bases:

>100_bases
TATGGAAATTAGAAAAGAAATTAACACAATTAATGATTTCCAGCCATTAACTCAAGATGAGCAGGACATTAAGGTTACCC
TTTACGATAAATTATTGAGC

Product: Flp pilus assembly protein ATPase CpaE-like protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase CpaE; Response Regulator Receiver Domain-Containing Protein; Pilus Assembly Protein CpaE; Flp Pilus Assembly Response Receiver ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like; Septum Site-Determining Protein

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MDKPLELCVSNNNQESPMSFCLAFPVQAIVASCGHQSLSWLSESLNQFENLKWQSASYEDQHLVKDKSNFNLVLLVLPSE
EVEAEKALAYAANFDCDIILVGHDTPQNILRLAFQYDVSDFIPSSSQSNELFSSLEKVSNRLVKNADLAPVVAIINGKAG
SGASFLSASLADVVSQREGSDLALLDMDLHHGTLAHILGCDAKYSICDVLGTIEDLDEIALKSTMTKNGNLSLLAAKPFE
LLTLDEEVDFNRIKELIWKYRQFYKQVILDFSRGPEDWNCDLLLNATILIVTQQNIMHLRQTKDLIFQLTKNMGIASEQI
NLVVNRYNKNSNIKLSDIKEALGISSISTVINDYKLSNECVDLGKPLTEVARKQKIVTDVRFLADKFLPISSEQDKTGTT
FWKRLLGN

Sequences:

>Translated_408_residues
MDKPLELCVSNNNQESPMSFCLAFPVQAIVASCGHQSLSWLSESLNQFENLKWQSASYEDQHLVKDKSNFNLVLLVLPSE
EVEAEKALAYAANFDCDIILVGHDTPQNILRLAFQYDVSDFIPSSSQSNELFSSLEKVSNRLVKNADLAPVVAIINGKAG
SGASFLSASLADVVSQREGSDLALLDMDLHHGTLAHILGCDAKYSICDVLGTIEDLDEIALKSTMTKNGNLSLLAAKPFE
LLTLDEEVDFNRIKELIWKYRQFYKQVILDFSRGPEDWNCDLLLNATILIVTQQNIMHLRQTKDLIFQLTKNMGIASEQI
NLVVNRYNKNSNIKLSDIKEALGISSISTVINDYKLSNECVDLGKPLTEVARKQKIVTDVRFLADKFLPISSEQDKTGTT
FWKRLLGN
>Mature_408_residues
MDKPLELCVSNNNQESPMSFCLAFPVQAIVASCGHQSLSWLSESLNQFENLKWQSASYEDQHLVKDKSNFNLVLLVLPSE
EVEAEKALAYAANFDCDIILVGHDTPQNILRLAFQYDVSDFIPSSSQSNELFSSLEKVSNRLVKNADLAPVVAIINGKAG
SGASFLSASLADVVSQREGSDLALLDMDLHHGTLAHILGCDAKYSICDVLGTIEDLDEIALKSTMTKNGNLSLLAAKPFE
LLTLDEEVDFNRIKELIWKYRQFYKQVILDFSRGPEDWNCDLLLNATILIVTQQNIMHLRQTKDLIFQLTKNMGIASEQI
NLVVNRYNKNSNIKLSDIKEALGISSISTVINDYKLSNECVDLGKPLTEVARKQKIVTDVRFLADKFLPISSEQDKTGTT
FWKRLLGN

Specific function: Unknown

COG id: COG4963

COG function: function code U; Flp pilus assembly protein, ATPase CpaE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45528; Mature: 45528

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPLELCVSNNNQESPMSFCLAFPVQAIVASCGHQSLSWLSESLNQFENLKWQSASYED
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
QHLVKDKSNFNLVLLVLPSEEVEAEKALAYAANFDCDIILVGHDTPQNILRLAFQYDVSD
HHHHCCCCCCCEEEEEECCCHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHCHHH
FIPSSSQSNELFSSLEKVSNRLVKNADLAPVVAIINGKAGSGASFLSASLADVVSQREGS
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
DLALLDMDLHHGTLAHILGCDAKYSICDVLGTIEDLDEIALKSTMTKNGNLSLLAAKPFE
CEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEE
LLTLDEEVDFNRIKELIWKYRQFYKQVILDFSRGPEDWNCDLLLNATILIVTQQNIMHLR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECHHHHHHH
QTKDLIFQLTKNMGIASEQINLVVNRYNKNSNIKLSDIKEALGISSISTVINDYKLSNEC
HHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCEEHHHHHHHHCHHHHHHHHHHHHCCHHH
VDLGKPLTEVARKQKIVTDVRFLADKFLPISSEQDKTGTTFWKRLLGN
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDKPLELCVSNNNQESPMSFCLAFPVQAIVASCGHQSLSWLSESLNQFENLKWQSASYED
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
QHLVKDKSNFNLVLLVLPSEEVEAEKALAYAANFDCDIILVGHDTPQNILRLAFQYDVSD
HHHHCCCCCCCEEEEEECCCHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHCHHH
FIPSSSQSNELFSSLEKVSNRLVKNADLAPVVAIINGKAGSGASFLSASLADVVSQREGS
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
DLALLDMDLHHGTLAHILGCDAKYSICDVLGTIEDLDEIALKSTMTKNGNLSLLAAKPFE
CEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEE
LLTLDEEVDFNRIKELIWKYRQFYKQVILDFSRGPEDWNCDLLLNATILIVTQQNIMHLR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECHHHHHHH
QTKDLIFQLTKNMGIASEQINLVVNRYNKNSNIKLSDIKEALGISSISTVINDYKLSNEC
HHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCEEHHHHHHHHCHHHHHHHHHHHHCCHHH
VDLGKPLTEVARKQKIVTDVRFLADKFLPISSEQDKTGTTFWKRLLGN
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA