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The map label for this gene is 167624196

Identifier: 167624196

GI number: 167624196

Start: 2755415

End: 2756422

Strand: Reverse

Name: 167624196

Synonym: Shal_2272

Alternate gene names: NA

Gene position: 2756422-2755415 (Counterclockwise)

Preceding gene: 167624197

Following gene: 167624183

Centisome position: 52.74

GC content: 42.46

Gene sequence:

>1008_bases
ATGATATTGATTAGGGCCTGCATTATGCTGAGTATATTGTCAGTAGTGTCCGCTTGCAGCTCTACTCCAGAAGAGACTCC
TGCGCCAATAAAGGCTCCGGAGCGTCAAGATTTGCTTGATGTAGGTACGTTATCGTCTATTACTCCAGATTTTTCAGCAC
CGACAACCGAAGAAGAGGCGCTACAAAAGGCGCATACCGAAGAGCAGTCTGGTAATATTGAAAAGGCACTGTATGCCTAT
ATCCAAGCATTAGATTTTAACGCTAAAAATGCCGAAACCTTTTATCAGATTGGGCGCATTCATACCATAAGGGGCAATCC
GGATATTGCCTATAGAGCATATAATGAAGCACTCGTTCTTAATCCTAACTTGATGATGGCTCATGCAGATCTTGGGGTCA
TTAGTATGGATAAGCGTCAATATAGAGAAGCGCGCTTACATCTTGAAAAGGCGATAGAGTTAGATCAAAAAAGATTAGCG
CTACTCGAAGAGAAGCAAAATATGGGGGCGTTTTTGGTGCCTAACCGAGAGTCTCCTGCAAGAGTCTATAACGCCATTGC
GATTTTAGAAGATGTCGAGAATAATCACCAAAAAGCCAGAAATTACTTCAGATTGATTTTAGAGTTACAGCCACACTCGT
CGATACTTATTACCAACTTAGGTTACTCCTATTATTTAACCGCTGAGCTGACAATGGCTGAGAAATATTTAAGACAGGCG
ATTAGAGAAGACTCTAGCTTCAATAGAGCCTGGACAAATTTGGGGCTTGTCTATGTTCGAAAAGGCTTTTATAAGCGTGC
GCTCGCCGCGTTTGAGCAGACAATGTCTCCGGCTGATGCACTTAATGACTTAGGCTACTTCCTCATGCTTGAGGGGCAGT
ATGAAAAAGCGATAGGGTTATTTGAGCGCGCAATCGATATGTCACCCAGCTATTTTGAGCAAGCTCAAAAAAACTTAAGA
AGGGCTAAAGCTGAGATTTCTGATGAATTTCAGCATGCAAGTTATTGA

Upstream 100 bases:

>100_bases
AAAGTATGGGGGCAGGCATTTTAGCGCTACATTATAAGAATAGGGGATGCTTATGAGACTGGAATGGATGCAGCTAAGTA
AACGGGGAGTGGGATCTGTC

Downstream 100 bases:

>100_bases
TTACTTAGTTGTTGATTATTTAGTTGTTGATTATTTAGCGGGGAATTAACCCAGAGTTAATGACAAAACAAAACTCTACA
ATATCAAGCGCTGCGATAAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Peptidase; Tetratricopeptide TPR_2 Repeat Protein; TPR Repeat Protein; TPR Domain Containing Protein; Protein Kinase; TPR-Repeat-Containing Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; Flp Pilus Assembly Protein TadD; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MILIRACIMLSILSVVSACSSTPEETPAPIKAPERQDLLDVGTLSSITPDFSAPTTEEEALQKAHTEEQSGNIEKALYAY
IQALDFNAKNAETFYQIGRIHTIRGNPDIAYRAYNEALVLNPNLMMAHADLGVISMDKRQYREARLHLEKAIELDQKRLA
LLEEKQNMGAFLVPNRESPARVYNAIAILEDVENNHQKARNYFRLILELQPHSSILITNLGYSYYLTAELTMAEKYLRQA
IREDSSFNRAWTNLGLVYVRKGFYKRALAAFEQTMSPADALNDLGYFLMLEGQYEKAIGLFERAIDMSPSYFEQAQKNLR
RAKAEISDEFQHASY

Sequences:

>Translated_335_residues
MILIRACIMLSILSVVSACSSTPEETPAPIKAPERQDLLDVGTLSSITPDFSAPTTEEEALQKAHTEEQSGNIEKALYAY
IQALDFNAKNAETFYQIGRIHTIRGNPDIAYRAYNEALVLNPNLMMAHADLGVISMDKRQYREARLHLEKAIELDQKRLA
LLEEKQNMGAFLVPNRESPARVYNAIAILEDVENNHQKARNYFRLILELQPHSSILITNLGYSYYLTAELTMAEKYLRQA
IREDSSFNRAWTNLGLVYVRKGFYKRALAAFEQTMSPADALNDLGYFLMLEGQYEKAIGLFERAIDMSPSYFEQAQKNLR
RAKAEISDEFQHASY
>Mature_335_residues
MILIRACIMLSILSVVSACSSTPEETPAPIKAPERQDLLDVGTLSSITPDFSAPTTEEEALQKAHTEEQSGNIEKALYAY
IQALDFNAKNAETFYQIGRIHTIRGNPDIAYRAYNEALVLNPNLMMAHADLGVISMDKRQYREARLHLEKAIELDQKRLA
LLEEKQNMGAFLVPNRESPARVYNAIAILEDVENNHQKARNYFRLILELQPHSSILITNLGYSYYLTAELTMAEKYLRQA
IREDSSFNRAWTNLGLVYVRKGFYKRALAAFEQTMSPADALNDLGYFLMLEGQYEKAIGLFERAIDMSPSYFEQAQKNLR
RAKAEISDEFQHASY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=255, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI32307148, Length=255, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38106; Mature: 38106

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIRACIMLSILSVVSACSSTPEETPAPIKAPERQDLLDVGTLSSITPDFSAPTTEEEA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCHHHH
LQKAHTEEQSGNIEKALYAYIQALDFNAKNAETFYQIGRIHTIRGNPDIAYRAYNEALVL
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCEEEEEECCEEEE
NPNLMMAHADLGVISMDKRQYREARLHLEKAIELDQKRLALLEEKQNMGAFLVPNRESPA
CCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH
RVYNAIAILEDVENNHQKARNYFRLILELQPHSSILITNLGYSYYLTAELTMAEKYLRQA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEEEHHHHHHHHHHHH
IREDSSFNRAWTNLGLVYVRKGFYKRALAAFEQTMSPADALNDLGYFLMLEGQYEKAIGL
HHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHHH
FERAIDMSPSYFEQAQKNLRRAKAEISDEFQHASY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILIRACIMLSILSVVSACSSTPEETPAPIKAPERQDLLDVGTLSSITPDFSAPTTEEEA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCHHHH
LQKAHTEEQSGNIEKALYAYIQALDFNAKNAETFYQIGRIHTIRGNPDIAYRAYNEALVL
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCEEEEEECCEEEE
NPNLMMAHADLGVISMDKRQYREARLHLEKAIELDQKRLALLEEKQNMGAFLVPNRESPA
CCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH
RVYNAIAILEDVENNHQKARNYFRLILELQPHSSILITNLGYSYYLTAELTMAEKYLRQA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEEEHHHHHHHHHHHH
IREDSSFNRAWTNLGLVYVRKGFYKRALAAFEQTMSPADALNDLGYFLMLEGQYEKAIGL
HHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHHH
FERAIDMSPSYFEQAQKNLRRAKAEISDEFQHASY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA