| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is astE [H]
Identifier: 167624159
GI number: 167624159
Start: 2710480
End: 2711580
Strand: Reverse
Name: astE [H]
Synonym: Shal_2235
Alternate gene names: 167624159
Gene position: 2711580-2710480 (Counterclockwise)
Preceding gene: 167624161
Following gene: 167624158
Centisome position: 51.88
GC content: 39.96
Gene sequence:
>1101_bases ATGCCCGTGGTATTTGAAATTTCTGCCAAAATAAAGCTGACATCGATAAATAAGGAGAAGTTTGTGTTTCACGAATTGAA ACAGTCTAAGGACTTTTTAGCGCTGACCCTGGCACATCCACAATATTTACCAGAAACTTTTGAGTTTGAGCTTGATAACC TGATCCGTGTAGAAGTTTGGGATACAGGTGTCATCATGTTTGAGCCGCTTAACGCTAAACATACCAAAGATATCGTATTG TCTTGTGCGGTCCACGGAAATGAAACGGCTCCGATTGAACTGTGTAATGATCTTATGACACAACTACTGAGTGAGAACAT TGCACTAAAACAGCGAGTGCTTTTTCTTATTGGTAACCCACCCGCTATCCATAACGGTACGCGCTTTATCGATGAAAATC TCAATAGGCTGTTTAATGGCGCATACTCTCGCGGTGAAGGTTTATGTAACCCTGAGCGTGTGAGAGCACAAAAACTTGAG CAATATATCGATAAGTTTTTTGCGTCACAGTCAGGCGAACGCCACCGAATGCATTACGATCTTCATACTGCGATTCGTGC TTCTAAGCATGAAAAGTTTGCGATTTACCCTTATCGCGCCAATCGTAAATACAGTAAACAGCAGATTATGTTCCTAGAGT CTTGTGGTGTAAATACCATTTTATTCCACCACGAACCCACCACAACGTTTAGCTATTTTTCCTCTGAAAACTATCATGCC GATGCATTTACCATTGAACTCGGTAAAGTGTTTCCTATGGGGCAAAATGATATGACGCGCTTTATCGCGATGAAAGAGAT GCTAACACTATTAATGAAGGGGAAAGACCTACAGTTACCCGACTTCGATATGAAACGTTTAAACCTGTATCAGGTTTGTC GTTCGATAAATAAACATTTTGATGATTTTGAATTTAGTTTTGCTAACGATGTAGAAAACTTTACCGCATTTCCAAAAGGA TTCACCTTAGCGAAAGAGGGGGGTAAAGAAGTGAAGATTGAACATGAGTTTGAATCTATTGTTTTTCCAAATGCCAAAGT GCCAGTAGGCCAAAGAACGGTATTGTGTTTAAAGTCAGCAGATGAAACTCTTTTAGAATAA
Upstream 100 bases:
>100_bases GCTGATGATTTGTTGTACTACCGAGGCTAAAAAGGACACGAGATACATGAGTCAAATATGCTACTATCGCTCCCAGAATT AGCGAGGCTAGGTATTACAA
Downstream 100 bases:
>100_bases ATTCAAACTGAATAACTGTGCATGTAAACCAATATATACATGCACAGACATGCTTAGTTATGTTTCAATGATGGGAAGTG TTGAGAGTTAGTTTACGTTA
Product: succinylglutamate desuccinylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MPVVFEISAKIKLTSINKEKFVFHELKQSKDFLALTLAHPQYLPETFEFELDNLIRVEVWDTGVIMFEPLNAKHTKDIVL SCAVHGNETAPIELCNDLMTQLLSENIALKQRVLFLIGNPPAIHNGTRFIDENLNRLFNGAYSRGEGLCNPERVRAQKLE QYIDKFFASQSGERHRMHYDLHTAIRASKHEKFAIYPYRANRKYSKQQIMFLESCGVNTILFHHEPTTTFSYFSSENYHA DAFTIELGKVFPMGQNDMTRFIAMKEMLTLLMKGKDLQLPDFDMKRLNLYQVCRSINKHFDDFEFSFANDVENFTAFPKG FTLAKEGGKEVKIEHEFESIVFPNAKVPVGQRTVLCLKSADETLLE
Sequences:
>Translated_366_residues MPVVFEISAKIKLTSINKEKFVFHELKQSKDFLALTLAHPQYLPETFEFELDNLIRVEVWDTGVIMFEPLNAKHTKDIVL SCAVHGNETAPIELCNDLMTQLLSENIALKQRVLFLIGNPPAIHNGTRFIDENLNRLFNGAYSRGEGLCNPERVRAQKLE QYIDKFFASQSGERHRMHYDLHTAIRASKHEKFAIYPYRANRKYSKQQIMFLESCGVNTILFHHEPTTTFSYFSSENYHA DAFTIELGKVFPMGQNDMTRFIAMKEMLTLLMKGKDLQLPDFDMKRLNLYQVCRSINKHFDDFEFSFANDVENFTAFPKG FTLAKEGGKEVKIEHEFESIVFPNAKVPVGQRTVLCLKSADETLLE >Mature_365_residues PVVFEISAKIKLTSINKEKFVFHELKQSKDFLALTLAHPQYLPETFEFELDNLIRVEVWDTGVIMFEPLNAKHTKDIVLS CAVHGNETAPIELCNDLMTQLLSENIALKQRVLFLIGNPPAIHNGTRFIDENLNRLFNGAYSRGEGLCNPERVRAQKLEQ YIDKFFASQSGERHRMHYDLHTAIRASKHEKFAIYPYRANRKYSKQQIMFLESCGVNTILFHHEPTTTFSYFSSENYHAD AFTIELGKVFPMGQNDMTRFIAMKEMLTLLMKGKDLQLPDFDMKRLNLYQVCRSINKHFDDFEFSFANDVENFTAFPKGF TLAKEGGKEVKIEHEFESIVFPNAKVPVGQRTVLCLKSADETLLE
Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate [H]
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788040, Length=329, Percent_Identity=35.5623100303951, Blast_Score=206, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007036 - InterPro: IPR016681 [H]
Pfam domain/function: PF04952 AstE_AspA [H]
EC number: =3.5.1.96 [H]
Molecular weight: Translated: 42255; Mature: 42124
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVFEISAKIKLTSINKEKFVFHELKQSKDFLALTLAHPQYLPETFEFELDNLIRVEVW CCEEEEEECEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCCCCCEEEEEEE DTGVIMFEPLNAKHTKDIVLSCAVHGNETAPIELCNDLMTQLLSENIALKQRVLFLIGNP CCCEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHEEEEEEEEECCC PAIHNGTRFIDENLNRLFNGAYSRGEGLCNPERVRAQKLEQYIDKFFASQSGERHRMHYD CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEH LHTAIRASKHEKFAIYPYRANRKYSKQQIMFLESCGVNTILFHHEPTTTFSYFSSENYHA HHHHHHHCCCCEEEEEEECCCCCCCHHHEEEEECCCCEEEEEECCCCCEEEEECCCCCCC DAFTIELGKVFPMGQNDMTRFIAMKEMLTLLMKGKDLQLPDFDMKRLNLYQVCRSINKHF EEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC DDFEFSFANDVENFTAFPKGFTLAKEGGKEVKIEHEFESIVFPNAKVPVGQRTVLCLKSA CCCCEEHHCCHHHHHCCCCCCEEECCCCCEEEEEECHHHEECCCCCCCCCCEEEEEEECC DETLLE CHHHCC >Mature Secondary Structure PVVFEISAKIKLTSINKEKFVFHELKQSKDFLALTLAHPQYLPETFEFELDNLIRVEVW CEEEEEECEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCCCCCEEEEEEE DTGVIMFEPLNAKHTKDIVLSCAVHGNETAPIELCNDLMTQLLSENIALKQRVLFLIGNP CCCEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHEEEEEEEEECCC PAIHNGTRFIDENLNRLFNGAYSRGEGLCNPERVRAQKLEQYIDKFFASQSGERHRMHYD CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEH LHTAIRASKHEKFAIYPYRANRKYSKQQIMFLESCGVNTILFHHEPTTTFSYFSSENYHA HHHHHHHCCCCEEEEEEECCCCCCCHHHEEEEECCCCEEEEEECCCCCEEEEECCCCCCC DAFTIELGKVFPMGQNDMTRFIAMKEMLTLLMKGKDLQLPDFDMKRLNLYQVCRSINKHF EEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC DDFEFSFANDVENFTAFPKGFTLAKEGGKEVKIEHEFESIVFPNAKVPVGQRTVLCLKSA CCCCEEHHCCHHHHHCCCCCCEEECCCCCEEEEEECHHHEECCCCCCCCCCEEEEEEECC DETLLE CHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA