Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624109

Identifier: 167624109

GI number: 167624109

Start: 2643546

End: 2645762

Strand: Direct

Name: 167624109

Synonym: Shal_2185

Alternate gene names: NA

Gene position: 2643546-2645762 (Clockwise)

Preceding gene: 167624105

Following gene: 167624110

Centisome position: 50.58

GC content: 40.69

Gene sequence:

>2217_bases
ATGTTTAAGAACATAAAGTCTATAAAAAACTTCGGTATCTTCAAGGATGCCAACACTAACGCTGGTCAACCTTTCTATCA
ATTTAACTTATTCTATGGTTTTAATTATTCTGGAAAGACCACGCTTTCACGTGTTTTCCTTGCAATGCAGCTTGGTGAAA
TACCAGAAGGCTTCACAGGGGCATCTTTTGAAGTCGATTGTCACGAAGCTAGCTCTATCAAGAGTAACAACTTACAAAAA
GTAGAAAACCTACGTGTTTTCAATTCAGATTACATCGCTAAAAACGTTAATTTTGATGAATCAAGCGTCAGCCCTGTGTT
GATCGTAGGTGAACGTAACATCGAACTAGAAACAGAACTTCAAGGATTGGAAGAGGTTATCCCTACAAAGGAAGTTAATC
GAGATCAAAACACAGGATTCGCAGCAAGCAAAGAAAAAGAAAAAAACAATCGTTTAACTGAAGTAGGTCGAAACGTTGCG
GTATTGAGTATTCTAGGTCGGTCTACATTCAACGCTTCAAGCGTAAGAACCATGCTTGCATCTGCTGAAGCAAGTCATGA
TCTAACACCAGAACAAATGAGTGCTTACATTGATACAGCGAGAGCCAGTGCTGTATCAAGCGTACCTAAAGTTAAACTTA
GCACCCCAGAAATGAAAGATATTTTGGGTGAAATTGAATCAATCATGGCGACCTCAGTAACACAGACAACTATTGCAGAG
TTGGATGCAGATAAAAGCCTTAGAAGTTGGGTTGAAGAAGGGATAGAGCGTAACGCTGGACACACCACCTGCCAGTTCTG
TCACAACACGATTAGTCAGGCAAGAATTGATGAGTTAAATGCATATTTTTCGGAAGCGTACAAAGACCTTAGCCAAAGGA
TTGATGTTGCTATCGCTTCGGTTCAATCACAAGCATTCACATCAAGTATTCCAGATACCAGTCAACTTTATCCAGATCTA
CAGAAAGGTTTTGACGAATTAAGAATACAAATCCAGCCAATCGATGACTCTGTCGAAGAACTAAAAACGTCACTGGTTAA
GTTACTTACTGACAAGAAAGAGCACATGTCTGAGGTACTTCCATTTAACGCATCAGACTATCCTTTACCGTTAGTTACAG
ACTTGATGGAGCAGTTCAACGCACCAATAACTGCGCACAATGAGCGTGCTGTTAACCACTCTACAGAGCAACGTCAGGCT
ATTGAAGCAATCAAGCGTCACTATGTGTACCAAGAAACACAGAACTACGATCACCCGCAAGCACAGCTTGATATACAAGC
GTTTAAAGATGCTGCTGTCACCGCACAAAACGAGATCAACGCTAATCAGGCACGTATCGATGCGATAAAGGCTGAACTTA
ATAACACTAAACAGGGAGCGCATAGTCTAAACGACAACTTGCGACAGTATTTCGGTAAGACTGATATAAAGATTAAGCCT
GTAGGTGCTACATATAAATTCATGCGTGAAGATCGAGAGGCAAAGCACTTATCTGATGGTGAACGTACTGCAATAGCATT
TGCGTACTTCATTACACAGTTAGAAGATGAATCCTTAAATGGGATCAAACCTATCGTGTATTTGGATGATCCGATCTGTA
GCCTTGATTCAAACCACATTTATAACGTTCTTGGCATTATCAAAAGTAAACTAGGTCATGAGCACGTAGAACAGCTTTTC
ATTTCTACGCATAACTTTGAGTTCTTCAACTTAGTAAAAACGTGGTTGTCCCATTTCAGTAGAACTAAGACGGGCACAGC
AAAGAGAGCACAGTTCTTCTTAGTTAATCGTACAGGCGACCAATCTAAGATTGACCCATTACCTAAGCTACTTAAAGACC
ACAGATCCGAGTATGCTTACTTGATCAGCAAGGTTAAAGAAGCTGTAGAACGACCAGAGAATTGTGATTCTATTGCAGTG
CAGTCGTACGTAAGAAAGATACTGGAAGTGTACTTTTCGTTCCGATTCAATCTGACTGAGTTCAGGGGTAACGGTAAAGA
CCAGATAGCACCTAATCTACTGAAAGATATTGAAGGTGCGGAAGTTAAAGCAAATACTTTGTATGAATACATGAATGAAA
AATGCCATGCTAAGTCAATGGAGCTAGGCGTTCAGTTCCCCGAAGCTGTGCAGCCGCAGTTAACTAACGCATGGGAGATC
ATTACAAACGCCTTAGAAACGAACGACAAGCCACACTATGACGCATATTATGCCTAA

Upstream 100 bases:

>100_bases
TCAAACGCCCTATTAAATTAAGCAACTAAATTGATAGCAGTCACATCCAATCTTAGATAATGCATAGTAGAATGAAGAGT
CACCTATTTGGGGTATGTGC

Downstream 100 bases:

>100_bases
CTCTAGGGAATCACGTCATTTGTTTTCTTATTAACTTATCATGATGCTTTGCAGTAAAGAGGTGCTATTGAAATATCAAA
ATAATAAAGAAGACCAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 738; Mature: 738

Protein sequence:

>738_residues
MFKNIKSIKNFGIFKDANTNAGQPFYQFNLFYGFNYSGKTTLSRVFLAMQLGEIPEGFTGASFEVDCHEASSIKSNNLQK
VENLRVFNSDYIAKNVNFDESSVSPVLIVGERNIELETELQGLEEVIPTKEVNRDQNTGFAASKEKEKNNRLTEVGRNVA
VLSILGRSTFNASSVRTMLASAEASHDLTPEQMSAYIDTARASAVSSVPKVKLSTPEMKDILGEIESIMATSVTQTTIAE
LDADKSLRSWVEEGIERNAGHTTCQFCHNTISQARIDELNAYFSEAYKDLSQRIDVAIASVQSQAFTSSIPDTSQLYPDL
QKGFDELRIQIQPIDDSVEELKTSLVKLLTDKKEHMSEVLPFNASDYPLPLVTDLMEQFNAPITAHNERAVNHSTEQRQA
IEAIKRHYVYQETQNYDHPQAQLDIQAFKDAAVTAQNEINANQARIDAIKAELNNTKQGAHSLNDNLRQYFGKTDIKIKP
VGATYKFMREDREAKHLSDGERTAIAFAYFITQLEDESLNGIKPIVYLDDPICSLDSNHIYNVLGIIKSKLGHEHVEQLF
ISTHNFEFFNLVKTWLSHFSRTKTGTAKRAQFFLVNRTGDQSKIDPLPKLLKDHRSEYAYLISKVKEAVERPENCDSIAV
QSYVRKILEVYFSFRFNLTEFRGNGKDQIAPNLLKDIEGAEVKANTLYEYMNEKCHAKSMELGVQFPEAVQPQLTNAWEI
ITNALETNDKPHYDAYYA

Sequences:

>Translated_738_residues
MFKNIKSIKNFGIFKDANTNAGQPFYQFNLFYGFNYSGKTTLSRVFLAMQLGEIPEGFTGASFEVDCHEASSIKSNNLQK
VENLRVFNSDYIAKNVNFDESSVSPVLIVGERNIELETELQGLEEVIPTKEVNRDQNTGFAASKEKEKNNRLTEVGRNVA
VLSILGRSTFNASSVRTMLASAEASHDLTPEQMSAYIDTARASAVSSVPKVKLSTPEMKDILGEIESIMATSVTQTTIAE
LDADKSLRSWVEEGIERNAGHTTCQFCHNTISQARIDELNAYFSEAYKDLSQRIDVAIASVQSQAFTSSIPDTSQLYPDL
QKGFDELRIQIQPIDDSVEELKTSLVKLLTDKKEHMSEVLPFNASDYPLPLVTDLMEQFNAPITAHNERAVNHSTEQRQA
IEAIKRHYVYQETQNYDHPQAQLDIQAFKDAAVTAQNEINANQARIDAIKAELNNTKQGAHSLNDNLRQYFGKTDIKIKP
VGATYKFMREDREAKHLSDGERTAIAFAYFITQLEDESLNGIKPIVYLDDPICSLDSNHIYNVLGIIKSKLGHEHVEQLF
ISTHNFEFFNLVKTWLSHFSRTKTGTAKRAQFFLVNRTGDQSKIDPLPKLLKDHRSEYAYLISKVKEAVERPENCDSIAV
QSYVRKILEVYFSFRFNLTEFRGNGKDQIAPNLLKDIEGAEVKANTLYEYMNEKCHAKSMELGVQFPEAVQPQLTNAWEI
ITNALETNDKPHYDAYYA
>Mature_738_residues
MFKNIKSIKNFGIFKDANTNAGQPFYQFNLFYGFNYSGKTTLSRVFLAMQLGEIPEGFTGASFEVDCHEASSIKSNNLQK
VENLRVFNSDYIAKNVNFDESSVSPVLIVGERNIELETELQGLEEVIPTKEVNRDQNTGFAASKEKEKNNRLTEVGRNVA
VLSILGRSTFNASSVRTMLASAEASHDLTPEQMSAYIDTARASAVSSVPKVKLSTPEMKDILGEIESIMATSVTQTTIAE
LDADKSLRSWVEEGIERNAGHTTCQFCHNTISQARIDELNAYFSEAYKDLSQRIDVAIASVQSQAFTSSIPDTSQLYPDL
QKGFDELRIQIQPIDDSVEELKTSLVKLLTDKKEHMSEVLPFNASDYPLPLVTDLMEQFNAPITAHNERAVNHSTEQRQA
IEAIKRHYVYQETQNYDHPQAQLDIQAFKDAAVTAQNEINANQARIDAIKAELNNTKQGAHSLNDNLRQYFGKTDIKIKP
VGATYKFMREDREAKHLSDGERTAIAFAYFITQLEDESLNGIKPIVYLDDPICSLDSNHIYNVLGIIKSKLGHEHVEQLF
ISTHNFEFFNLVKTWLSHFSRTKTGTAKRAQFFLVNRTGDQSKIDPLPKLLKDHRSEYAYLISKVKEAVERPENCDSIAV
QSYVRKILEVYFSFRFNLTEFRGNGKDQIAPNLLKDIEGAEVKANTLYEYMNEKCHAKSMELGVQFPEAVQPQLTNAWEI
ITNALETNDKPHYDAYYA

Specific function: Unknown

COG id: COG4694

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83367; Mature: 83367

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNIKSIKNFGIFKDANTNAGQPFYQFNLFYGFNYSGKTTLSRVFLAMQLGEIPEGFTG
CCCCHHHHHHCCCEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
ASFEVDCHEASSIKSNNLQKVENLRVFNSDYIAKNVNFDESSVSPVLIVGERNIELETEL
CCEEEECCHHCCCCCCCHHHHHHHHEECCCHHEECCCCCCCCCCCEEEECCCCCCHHHHH
QGLEEVIPTKEVNRDQNTGFAASKEKEKNNRLTEVGRNVAVLSILGRSTFNASSVRTMLA
HHHHHHCCCHHCCCCCCCCCCCCCHHHHCCHHHHHCCCEEEEHHHCCCCCCHHHHHHHHH
SAEASHDLTPEQMSAYIDTARASAVSSVPKVKLSTPEMKDILGEIESIMATSVTQTTIAE
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LDADKSLRSWVEEGIERNAGHTTCQFCHNTISQARIDELNAYFSEAYKDLSQRIDVAIAS
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSQAFTSSIPDTSQLYPDLQKGFDELRIQIQPIDDSVEELKTSLVKLLTDKKEHMSEVL
HHHHHHHCCCCCHHHHCHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHC
PFNASDYPLPLVTDLMEQFNAPITAHNERAVNHSTEQRQAIEAIKRHYVYQETQNYDHPQ
CCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
AQLDIQAFKDAAVTAQNEINANQARIDAIKAELNNTKQGAHSLNDNLRQYFGKTDIKIKP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEE
VGATYKFMREDREAKHLSDGERTAIAFAYFITQLEDESLNGIKPIVYLDDPICSLDSNHI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHH
YNVLGIIKSKLGHEHVEQLFISTHNFEFFNLVKTWLSHFSRTKTGTAKRAQFFLVNRTGD
HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
QSKIDPLPKLLKDHRSEYAYLISKVKEAVERPENCDSIAVQSYVRKILEVYFSFRFNLTE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
FRGNGKDQIAPNLLKDIEGAEVKANTLYEYMNEKCHAKSMELGVQFPEAVQPQLTNAWEI
HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH
ITNALETNDKPHYDAYYA
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFKNIKSIKNFGIFKDANTNAGQPFYQFNLFYGFNYSGKTTLSRVFLAMQLGEIPEGFTG
CCCCHHHHHHCCCEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
ASFEVDCHEASSIKSNNLQKVENLRVFNSDYIAKNVNFDESSVSPVLIVGERNIELETEL
CCEEEECCHHCCCCCCCHHHHHHHHEECCCHHEECCCCCCCCCCCEEEECCCCCCHHHHH
QGLEEVIPTKEVNRDQNTGFAASKEKEKNNRLTEVGRNVAVLSILGRSTFNASSVRTMLA
HHHHHHCCCHHCCCCCCCCCCCCCHHHHCCHHHHHCCCEEEEHHHCCCCCCHHHHHHHHH
SAEASHDLTPEQMSAYIDTARASAVSSVPKVKLSTPEMKDILGEIESIMATSVTQTTIAE
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LDADKSLRSWVEEGIERNAGHTTCQFCHNTISQARIDELNAYFSEAYKDLSQRIDVAIAS
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSQAFTSSIPDTSQLYPDLQKGFDELRIQIQPIDDSVEELKTSLVKLLTDKKEHMSEVL
HHHHHHHCCCCCHHHHCHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHC
PFNASDYPLPLVTDLMEQFNAPITAHNERAVNHSTEQRQAIEAIKRHYVYQETQNYDHPQ
CCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
AQLDIQAFKDAAVTAQNEINANQARIDAIKAELNNTKQGAHSLNDNLRQYFGKTDIKIKP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEE
VGATYKFMREDREAKHLSDGERTAIAFAYFITQLEDESLNGIKPIVYLDDPICSLDSNHI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHH
YNVLGIIKSKLGHEHVEQLFISTHNFEFFNLVKTWLSHFSRTKTGTAKRAQFFLVNRTGD
HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
QSKIDPLPKLLKDHRSEYAYLISKVKEAVERPENCDSIAVQSYVRKILEVYFSFRFNLTE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
FRGNGKDQIAPNLLKDIEGAEVKANTLYEYMNEKCHAKSMELGVQFPEAVQPQLTNAWEI
HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH
ITNALETNDKPHYDAYYA
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA