Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624103

Identifier: 167624103

GI number: 167624103

Start: 2634252

End: 2635220

Strand: Direct

Name: 167624103

Synonym: Shal_2179

Alternate gene names: NA

Gene position: 2634252-2635220 (Clockwise)

Preceding gene: 167624102

Following gene: 167624104

Centisome position: 50.4

GC content: 36.22

Gene sequence:

>969_bases
ATGGCGATTTTCGATTTATTTTCATCAAGGCAAAAAAAAGCCCGAGGTGACGTGCCTGATGTCTATCTGTATGACTCTAT
TCCAGATAAATTGAGAGTTCAAATTGTGCATATTATCAAAGCAACAATTGGAACTAGGGTAAATAATAGTCACTATGGAG
GAGAAACATATTCTGAAGTCGTATATCGTGAAATTCACGAGATTTTATGCAAAGAATACGGTGTTTTTTCATTATCCCAA
AAGCATAGAATAAGTCACTTTGAAGCAGTCTATGATTATTTTTTATACTCTGAGGATTTCGAAGAATGCTTAGATATTAT
TGAGCTGTCATTTAAATTCATTGAGTTCCACGTCAAAGGAAAGCAATATCAATTTACACATGAAGAAGGAACCAAACAAG
AAGCAAATGACGCAATTGACGAGTTAAATCAGAGGTTCAAAGAGTCAGGCGTTGGCTATGAGTTCCTTTCTGGCGAGATT
ATTAGAATTGATTCTCAATTCATTCATAGTGAGGTAGTAAAACCTACTCTGTCAATTTTACAAGGTGAAAATATTTTTAA
TGGAGCAAGAGATGAGTTCTTATCCGCTCACTCCCATTACCGAAGTCAACGTTATAAAGAGGCTCTTGTAGATTGCTTGA
AATCGTTTGAAAGTACCATGAAAGCAATATGTGAGAAGCATGGCTGGCAGTTTGGTAAAAATGACACCGCAAAAAAATTA
ATAAATGTTTGCCTCACTAATAATCTTATTCCTGTTTACATGCAAGAGCAGTTTAGCCAGTTTCGAGCTTTGCTTGAAAG
TGGGGTTCCAACAGTAAGAAATAAAGAAGGTGGTCATGGGCAAGGTTCTGAAATAAAGAACGTATCGGAAACCATGGTTA
GCTATACATTGCACCTAACTGCAACCAATATTGTTTTTTTGGGCGAATGCGAAAAGAAAGTTAACAAGGCAAAACAAGCA
GACGCATAA

Upstream 100 bases:

>100_bases
CAGTTGGCTAAGTTCCGCTTCGCATCACATTATAGCTAACAATTTTTGCCCGCTTAAGCGGGCGTTAACTTTCAGTGAAA
CTTTATCGCAAGGAACAAAG

Downstream 100 bases:

>100_bases
CAGCAGTCACTGTTTTCGTCAAAACAAAAAGCCGCCAAAAACAACGCCAACCTATACGCTGTTTTTGGCGGCGTTATACG
TTTCGGTCAGTTTGGAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MAIFDLFSSRQKKARGDVPDVYLYDSIPDKLRVQIVHIIKATIGTRVNNSHYGGETYSEVVYREIHEILCKEYGVFSLSQ
KHRISHFEAVYDYFLYSEDFEECLDIIELSFKFIEFHVKGKQYQFTHEEGTKQEANDAIDELNQRFKESGVGYEFLSGEI
IRIDSQFIHSEVVKPTLSILQGENIFNGARDEFLSAHSHYRSQRYKEALVDCLKSFESTMKAICEKHGWQFGKNDTAKKL
INVCLTNNLIPVYMQEQFSQFRALLESGVPTVRNKEGGHGQGSEIKNVSETMVSYTLHLTATNIVFLGECEKKVNKAKQA
DA

Sequences:

>Translated_322_residues
MAIFDLFSSRQKKARGDVPDVYLYDSIPDKLRVQIVHIIKATIGTRVNNSHYGGETYSEVVYREIHEILCKEYGVFSLSQ
KHRISHFEAVYDYFLYSEDFEECLDIIELSFKFIEFHVKGKQYQFTHEEGTKQEANDAIDELNQRFKESGVGYEFLSGEI
IRIDSQFIHSEVVKPTLSILQGENIFNGARDEFLSAHSHYRSQRYKEALVDCLKSFESTMKAICEKHGWQFGKNDTAKKL
INVCLTNNLIPVYMQEQFSQFRALLESGVPTVRNKEGGHGQGSEIKNVSETMVSYTLHLTATNIVFLGECEKKVNKAKQA
DA
>Mature_321_residues
AIFDLFSSRQKKARGDVPDVYLYDSIPDKLRVQIVHIIKATIGTRVNNSHYGGETYSEVVYREIHEILCKEYGVFSLSQK
HRISHFEAVYDYFLYSEDFEECLDIIELSFKFIEFHVKGKQYQFTHEEGTKQEANDAIDELNQRFKESGVGYEFLSGEII
RIDSQFIHSEVVKPTLSILQGENIFNGARDEFLSAHSHYRSQRYKEALVDCLKSFESTMKAICEKHGWQFGKNDTAKKLI
NVCLTNNLIPVYMQEQFSQFRALLESGVPTVRNKEGGHGQGSEIKNVSETMVSYTLHLTATNIVFLGECEKKVNKAKQAD
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36989; Mature: 36858

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFDLFSSRQKKARGDVPDVYLYDSIPDKLRVQIVHIIKATIGTRVNNSHYGGETYSEV
CCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
VYREIHEILCKEYGVFSLSQKHRISHFEAVYDYFLYSEDFEECLDIIELSFKFIEFHVKG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
KQYQFTHEEGTKQEANDAIDELNQRFKESGVGYEFLSGEIIRIDSQFIHSEVVKPTLSIL
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEHHCCCEEEECHHHHHHHHHHHHHHHH
QGENIFNGARDEFLSAHSHYRSQRYKEALVDCLKSFESTMKAICEKHGWQFGKNDTAKKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
INVCLTNNLIPVYMQEQFSQFRALLESGVPTVRNKEGGHGQGSEIKNVSETMVSYTLHLT
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE
ATNIVFLGECEKKVNKAKQADA
EEEEEEEEHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIFDLFSSRQKKARGDVPDVYLYDSIPDKLRVQIVHIIKATIGTRVNNSHYGGETYSEV
CHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
VYREIHEILCKEYGVFSLSQKHRISHFEAVYDYFLYSEDFEECLDIIELSFKFIEFHVKG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
KQYQFTHEEGTKQEANDAIDELNQRFKESGVGYEFLSGEIIRIDSQFIHSEVVKPTLSIL
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEHHCCCEEEECHHHHHHHHHHHHHHHH
QGENIFNGARDEFLSAHSHYRSQRYKEALVDCLKSFESTMKAICEKHGWQFGKNDTAKKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
INVCLTNNLIPVYMQEQFSQFRALLESGVPTVRNKEGGHGQGSEIKNVSETMVSYTLHLT
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE
ATNIVFLGECEKKVNKAKQADA
EEEEEEEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA