| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624096
Identifier: 167624096
GI number: 167624096
Start: 2624863
End: 2625066
Strand: Direct
Name: 167624096
Synonym: Shal_2172
Alternate gene names: NA
Gene position: 2624863-2625066 (Clockwise)
Preceding gene: 167624095
Following gene: 167624097
Centisome position: 50.22
GC content: 40.69
Gene sequence:
>204_bases ATGAAGTATGACACCAATCATAAAGTGCTCGGCGAGGGCAATTTTGTTGTCTCTATTAGTGAAGGAGTTTTTGCCAATGA ACATGTGGCTTTCTATGACTTATTCCGTCTCGATAACGGTAAAATCGTTGAGCACTGGGACACTATCGAAACGATTCCAG CTCAATCTGAGTGGAAACATACTAACGGTAAATTTGGCTTCTAA
Upstream 100 bases:
>100_bases TGATTTAAGTAAACTAATTGACCAGGCAACTCTAATCAAGCTCCTAATTTGAAGTGGTCTTGGTAAGGCGCTCGAAGAGC TGGCTAATGCAGGGCTTACG
Downstream 100 bases:
>100_bases CGTGCAAGGAAGGATTATTTAGCGGCTATTTAATATAGCAGCTACTAATACCGCTATTTAGCACAACCAGCCAATACTCA TCACGGGTACAACGCGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MKYDTNHKVLGEGNFVVSISEGVFANEHVAFYDLFRLDNGKIVEHWDTIETIPAQSEWKHTNGKFGF
Sequences:
>Translated_67_residues MKYDTNHKVLGEGNFVVSISEGVFANEHVAFYDLFRLDNGKIVEHWDTIETIPAQSEWKHTNGKFGF >Mature_67_residues MKYDTNHKVLGEGNFVVSISEGVFANEHVAFYDLFRLDNGKIVEHWDTIETIPAQSEWKHTNGKFGF
Specific function: Unknown
COG id: COG4922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7716; Mature: 7716
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDTNHKVLGEGNFVVSISEGVFANEHVAFYDLFRLDNGKIVEHWDTIETIPAQSEWKH CCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCEECCCCCCCCCC TNGKFGF CCCCCCC >Mature Secondary Structure MKYDTNHKVLGEGNFVVSISEGVFANEHVAFYDLFRLDNGKIVEHWDTIETIPAQSEWKH CCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCEECCCCCCCCCC TNGKFGF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA