Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624047

Identifier: 167624047

GI number: 167624047

Start: 2558137

End: 2559072

Strand: Direct

Name: 167624047

Synonym: Shal_2123

Alternate gene names: NA

Gene position: 2558137-2559072 (Clockwise)

Preceding gene: 167624046

Following gene: 167624048

Centisome position: 48.94

GC content: 42.2

Gene sequence:

>936_bases
ATGAGCAGTTTTAAACCATTGCCATTGGCAACAAAAATTTCTACGCCTTTTTGGCAAGCATTAAAGGAACAAAGTATTCA
ATTACAGCAATGTAATTCATGCGACGGCTGGGTATTTTTTCCACGTAACCATTGTAGTCATTGTTTAGCGCACGACTTAA
CATGGAAACCTGTTAGCGGCGAAGCAACTTTATATACCTATACTGTTGCCCGAGTACCGACTATGGCAGAATTTAGCGAC
GAGTCCCCGCAAATTCTCGCCGTTGTAACCCTCAAAGAGGGGGTTAGAATGAATACCACTCTAGTCGGGTTGCAAGAAGA
GGACATAAAGGTCGGCATGCATTTAAAGCCTGTATTTGACAAAGTTGATGCCAAAGGCAATACACTTTTAAGATTTACTG
GTGTTGATAGCGATTTAAGTGTGCTTGAATATCAAGACCCGTTGGTGAATTTACCCAAAAATAGTCAGGGCCAAGTTCAG
GTACCGATTAACAATCTTACTGCACTTAACGCCTTAGTGACTGATGATTTTTCACCTTGGAGTGAACCTTTAACGGTTGA
TCAGGGCTTAATTAATGCGTTCGCTGACCTTTCTGGTGATGATTATTGGATTCATACCGACCCGGAAAAGGCTGCCAAAG
AAAGTCCGTTTGGCACCACGATTGCCCATGGATCGTTAGTGCAAGTGTTACAGTCGCGATTACCTCTTACTTTACCTTAT
GAAATTGTTGGTTTTAATACCATGGTTAATTACGGTTCAGATAGACTGAGGTTTCCGACACCTGTTCCAGCTGGTGCAAA
AATCCAATCACGCGCAAGAGTCAAATCTGTAGCGTCTACCCATAAGGGTCTGCAACTTATCCTTGAAGTCCATATTCATC
TAGTCGATAACGATAGGCCTTCTGTTATCAATGAACTGGTCATTTTTTACCGCTAG

Upstream 100 bases:

>100_bases
CAGAGGGGCGGCAAATAAAGGACTGTGACAATGTATTTGTTAGCGGTACAGGCGGCGTGATGAGTGAGCAAGGCGCACTG
ATTTTACAAGGAGGCTAATG

Downstream 100 bases:

>100_bases
TTTCAATTTCCCCATGTGAAGTTTTGCCGAGTTAACAGCTCGGCTTTTTTTTGCTCAAAATAAAAATATTTTAATTATCT
TCAATGCTATTAGGCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSSFKPLPLATKISTPFWQALKEQSIQLQQCNSCDGWVFFPRNHCSHCLAHDLTWKPVSGEATLYTYTVARVPTMAEFSD
ESPQILAVVTLKEGVRMNTTLVGLQEEDIKVGMHLKPVFDKVDAKGNTLLRFTGVDSDLSVLEYQDPLVNLPKNSQGQVQ
VPINNLTALNALVTDDFSPWSEPLTVDQGLINAFADLSGDDYWIHTDPEKAAKESPFGTTIAHGSLVQVLQSRLPLTLPY
EIVGFNTMVNYGSDRLRFPTPVPAGAKIQSRARVKSVASTHKGLQLILEVHIHLVDNDRPSVINELVIFYR

Sequences:

>Translated_311_residues
MSSFKPLPLATKISTPFWQALKEQSIQLQQCNSCDGWVFFPRNHCSHCLAHDLTWKPVSGEATLYTYTVARVPTMAEFSD
ESPQILAVVTLKEGVRMNTTLVGLQEEDIKVGMHLKPVFDKVDAKGNTLLRFTGVDSDLSVLEYQDPLVNLPKNSQGQVQ
VPINNLTALNALVTDDFSPWSEPLTVDQGLINAFADLSGDDYWIHTDPEKAAKESPFGTTIAHGSLVQVLQSRLPLTLPY
EIVGFNTMVNYGSDRLRFPTPVPAGAKIQSRARVKSVASTHKGLQLILEVHIHLVDNDRPSVINELVIFYR
>Mature_310_residues
SSFKPLPLATKISTPFWQALKEQSIQLQQCNSCDGWVFFPRNHCSHCLAHDLTWKPVSGEATLYTYTVARVPTMAEFSDE
SPQILAVVTLKEGVRMNTTLVGLQEEDIKVGMHLKPVFDKVDAKGNTLLRFTGVDSDLSVLEYQDPLVNLPKNSQGQVQV
PINNLTALNALVTDDFSPWSEPLTVDQGLINAFADLSGDDYWIHTDPEKAAKESPFGTTIAHGSLVQVLQSRLPLTLPYE
IVGFNTMVNYGSDRLRFPTPVPAGAKIQSRARVKSVASTHKGLQLILEVHIHLVDNDRPSVINELVIFYR

Specific function: May be involved in the hydration of fatty acids for production of polyhydroxylalkanoates [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: =4.2.1.17 [H]

Molecular weight: Translated: 34540; Mature: 34409

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFKPLPLATKISTPFWQALKEQSIQLQQCNSCDGWVFFPRNHCSHCLAHDLTWKPVSG
CCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCC
EATLYTYTVARVPTMAEFSDESPQILAVVTLKEGVRMNTTLVGLQEEDIKVGMHLKPVFD
CEEEEEEEEECCCCHHHCCCCCCCEEEEEEECCCCEECEEEEECCCCCEEECEEEEHHHH
KVDAKGNTLLRFTGVDSDLSVLEYQDPLVNLPKNSQGQVQVPINNLTALNALVTDDFSPW
HCCCCCCEEEEEECCCCCCEEEEECCCCEECCCCCCCEEEEECCCCEEEHHEEECCCCCC
SEPLTVDQGLINAFADLSGDDYWIHTDPEKAAKESPFGTTIAHGSLVQVLQSRLPLTLPY
CCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCEECCHHHHHHHHHHCCEECCH
EIVGFNTMVNYGSDRLRFPTPVPAGAKIQSRARVKSVASTHKGLQLILEVHIHLVDNDRP
HEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCH
SVINELVIFYR
HHHHHEEEEEC
>Mature Secondary Structure 
SSFKPLPLATKISTPFWQALKEQSIQLQQCNSCDGWVFFPRNHCSHCLAHDLTWKPVSG
CCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCC
EATLYTYTVARVPTMAEFSDESPQILAVVTLKEGVRMNTTLVGLQEEDIKVGMHLKPVFD
CEEEEEEEEECCCCHHHCCCCCCCEEEEEEECCCCEECEEEEECCCCCEEECEEEEHHHH
KVDAKGNTLLRFTGVDSDLSVLEYQDPLVNLPKNSQGQVQVPINNLTALNALVTDDFSPW
HCCCCCCEEEEEECCCCCCEEEEECCCCEECCCCCCCEEEEECCCCEEEHHEEECCCCCC
SEPLTVDQGLINAFADLSGDDYWIHTDPEKAAKESPFGTTIAHGSLVQVLQSRLPLTLPY
CCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCEECCHHHHHHHHHHCCEECCH
EIVGFNTMVNYGSDRLRFPTPVPAGAKIQSRARVKSVASTHKGLQLILEVHIHLVDNDRP
HEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCH
SVINELVIFYR
HHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]