Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624044

Identifier: 167624044

GI number: 167624044

Start: 2554353

End: 2554979

Strand: Direct

Name: 167624044

Synonym: Shal_2120

Alternate gene names: NA

Gene position: 2554353-2554979 (Clockwise)

Preceding gene: 167624043

Following gene: 167624045

Centisome position: 48.87

GC content: 42.26

Gene sequence:

>627_bases
ATGACGGATTCTATAGAAAAACGAATTGATCGTCTTGAATCAATAGAAGAAATTCGCCAGTTAGCCGGGAAATATTCTTT
GTCTTTAGATATGCGAGATCTTGATGCTCATGTTGGTTTATTCGCTGAAGATATTCGCGTTGGCAGAGAAAAAGTCGGTA
GAGCTCATTTAAAAAGTTGGGTTGATAGCACGCTGAGGGATCAGTTTACTGGGACTTCACATCATATTGGTCAACATATC
ATTGAATTTATTGATGAAGATCATGCTATCGGAGTTGTCTACTCTAAAAACGAACATGAAACTGGCACCGAATGGGTTTT
GATGCAGATGCTTTACTGGGACGATTATGAGCGAATTGAGGGCAGATGGTATTTCAGGCGTAGATTGCCTTGTTATTGGT
ACGCTTCAGATCAAAATAAACCGCCAATCGGCGATACGAAGATGCGTTGGCCTGGCAAAACCTGTTATTCAGGGACCTTT
CATGACCTATTCCCGAGCTGGAAGGCGTTTTGGTCACAGCGACCTAATACAAGTGAATTGCCTAATGTCGCAATCCCTGC
GCCTTTAGAGCAATTTTTAAACATGATGCGTAAAGATACTCCTGCACCCAAGATCCGGGTCAAATAG

Upstream 100 bases:

>100_bases
CGCAAAGCTTGCGTCTTTTATTGCCAGTGAAGATGCCTCTTTCATTACCGGGCAAAATTTGGCAGTTAATGGCGGCATGG
CATTTTTGTAAGGGATTATC

Downstream 100 bases:

>100_bases
TATTTTCTGGCTTATATGAGCAGCTATTACATGCAAATTAGCCTCACCATTAATAAGGACATGATGTGAAAATTAAAAAC
CACAGTGGAGTGCCCTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTDSIEKRIDRLESIEEIRQLAGKYSLSLDMRDLDAHVGLFAEDIRVGREKVGRAHLKSWVDSTLRDQFTGTSHHIGQHI
IEFIDEDHAIGVVYSKNEHETGTEWVLMQMLYWDDYERIEGRWYFRRRLPCYWYASDQNKPPIGDTKMRWPGKTCYSGTF
HDLFPSWKAFWSQRPNTSELPNVAIPAPLEQFLNMMRKDTPAPKIRVK

Sequences:

>Translated_208_residues
MTDSIEKRIDRLESIEEIRQLAGKYSLSLDMRDLDAHVGLFAEDIRVGREKVGRAHLKSWVDSTLRDQFTGTSHHIGQHI
IEFIDEDHAIGVVYSKNEHETGTEWVLMQMLYWDDYERIEGRWYFRRRLPCYWYASDQNKPPIGDTKMRWPGKTCYSGTF
HDLFPSWKAFWSQRPNTSELPNVAIPAPLEQFLNMMRKDTPAPKIRVK
>Mature_207_residues
TDSIEKRIDRLESIEEIRQLAGKYSLSLDMRDLDAHVGLFAEDIRVGREKVGRAHLKSWVDSTLRDQFTGTSHHIGQHII
EFIDEDHAIGVVYSKNEHETGTEWVLMQMLYWDDYERIEGRWYFRRRLPCYWYASDQNKPPIGDTKMRWPGKTCYSGTFH
DLFPSWKAFWSQRPNTSELPNVAIPAPLEQFLNMMRKDTPAPKIRVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24533; Mature: 24402

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSIEKRIDRLESIEEIRQLAGKYSLSLDMRDLDAHVGLFAEDIRVGREKVGRAHLKSW
CCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDSTLRDQFTGTSHHIGQHIIEFIDEDHAIGVVYSKNEHETGTEWVLMQMLYWDDYERIE
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHC
GRWYFRRRLPCYWYASDQNKPPIGDTKMRWPGKTCYSGTFHDLFPSWKAFWSQRPNTSEL
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PNVAIPAPLEQFLNMMRKDTPAPKIRVK
CCCCCCHHHHHHHHHHHCCCCCCCEECC
>Mature Secondary Structure 
TDSIEKRIDRLESIEEIRQLAGKYSLSLDMRDLDAHVGLFAEDIRVGREKVGRAHLKSW
CCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDSTLRDQFTGTSHHIGQHIIEFIDEDHAIGVVYSKNEHETGTEWVLMQMLYWDDYERIE
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHC
GRWYFRRRLPCYWYASDQNKPPIGDTKMRWPGKTCYSGTFHDLFPSWKAFWSQRPNTSEL
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PNVAIPAPLEQFLNMMRKDTPAPKIRVK
CCCCCCHHHHHHHHHHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA