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The map label for this gene is mmgC [H]

Identifier: 167624038

GI number: 167624038

Start: 2546254

End: 2547423

Strand: Direct

Name: mmgC [H]

Synonym: Shal_2114

Alternate gene names: 167624038

Gene position: 2546254-2547423 (Clockwise)

Preceding gene: 167624037

Following gene: 167624039

Centisome position: 48.71

GC content: 45.3

Gene sequence:

>1170_bases
ATGTATATTGATTTAACGCCAGAACAGCATCAATTGCGCTTAAAAATCCGAGATTACTTTACCGAGCTGATGACCCCTGA
ACTCAAGTCAAAATTACGCGGTAAAGAGGGCGGTGATGATTATCGTGCAGTGATTGAGCAAATTGGTAAAGATGGTTGGT
TGGCTGTAGGTTGGCCAAAAGAGTTTGGTGGTCAAGGTTATCAAGCCACCGAGCAACTTATTTTCTTTGAAGAGGCCAAT
ATCGCGGGGGCGCCGCTGCCTTTTGTCACGATCAGTACCGTCGGGCCTGCATTGATGCAGCATGGCACTGAGGAGCAAAA
GCAGAAATTTTTACCCGGTATAGCAAAAGGTGAAATCATATTTGCTATTGGTTATTCAGAACCTAATGCAGGTTCTGACT
TAGCCACACTCACCACTTCAGCAAAAGTCGAACAAGAGTGTTTTATTGTAAATGGCAATAAAATGTGGACTTCTGGCGCT
GAGTCCGCCGATTATATTTGGTTAGCGGCGCGAACAGACCCCGAGCAAGCTCGCCATAAAGGTATTTCGATCATGGTCGT
TGATACCAAAACCTCGGGCTTTTCGCACACAGTGATCCCAACCTGTTCAAACCCAACGGCAGCGACCTATTATGATGATG
TCATCGTACCTAAAGAAATGCTTGTTGGTGAGCTTAACCATGGCTGGAAACTGATTACCTCACAATTAAACCATGAACGT
TTAGGTCTAGGTGCATGGTCAGATAAAGTGGTGAGTTTGTACCGCAAAGCTTACCTCTGGGCAAAAGCGAAAGATGAACA
AGGCCGGTGCGCGATGGATAATCCATGGGTGCGTAGCGCCTTAGCAAGGTGCTATTCTCGTTTGGAAGCGATGCGACTTA
TTAACTTTAGAATCGCTGCAGATCTTGAGCAAGGAAAAATGGATGTTGCACTGGCTTCAATAACCAAAGTCTACGGTTCT
GAGTCCGCGATTGAAATTTTACGCCTGTTACAAGATATTGTAGGTAGTAATGGCATGGTCAGAGAGGGCTCTAGTGCCTC
TTTATTATTAGGCGAACTCGAGTATGAAGTACGTGCTTCTGTCACATTGACTTTTGGTGGTGGAACGAACGAGATCCAAC
GTGAGCTAATTGCTCAATTTGGATTAGGTTTACCGCGCGCACGTAACTAA

Upstream 100 bases:

>100_bases
GTTCGGCAGTAAACCAAGTCGATAATGTTGAAAACGTTTTAGTTACGGCTGGAACCGGTGTACCAACCAGCGGTCTTATC
TTAAGTGCAGAGGGCTAGTT

Downstream 100 bases:

>100_bases
GGTAAGAAGGATTTGCATCATGAGCGATATGGATTTATTTAAAACTGAGGTTAGACAGTGGTTAGAAGCTAATTGCCCGC
ATTCACTCAGAACGCCTACA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MYIDLTPEQHQLRLKIRDYFTELMTPELKSKLRGKEGGDDYRAVIEQIGKDGWLAVGWPKEFGGQGYQATEQLIFFEEAN
IAGAPLPFVTISTVGPALMQHGTEEQKQKFLPGIAKGEIIFAIGYSEPNAGSDLATLTTSAKVEQECFIVNGNKMWTSGA
ESADYIWLAARTDPEQARHKGISIMVVDTKTSGFSHTVIPTCSNPTAATYYDDVIVPKEMLVGELNHGWKLITSQLNHER
LGLGAWSDKVVSLYRKAYLWAKAKDEQGRCAMDNPWVRSALARCYSRLEAMRLINFRIAADLEQGKMDVALASITKVYGS
ESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRASVTLTFGGGTNEIQRELIAQFGLGLPRARN

Sequences:

>Translated_389_residues
MYIDLTPEQHQLRLKIRDYFTELMTPELKSKLRGKEGGDDYRAVIEQIGKDGWLAVGWPKEFGGQGYQATEQLIFFEEAN
IAGAPLPFVTISTVGPALMQHGTEEQKQKFLPGIAKGEIIFAIGYSEPNAGSDLATLTTSAKVEQECFIVNGNKMWTSGA
ESADYIWLAARTDPEQARHKGISIMVVDTKTSGFSHTVIPTCSNPTAATYYDDVIVPKEMLVGELNHGWKLITSQLNHER
LGLGAWSDKVVSLYRKAYLWAKAKDEQGRCAMDNPWVRSALARCYSRLEAMRLINFRIAADLEQGKMDVALASITKVYGS
ESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRASVTLTFGGGTNEIQRELIAQFGLGLPRARN
>Mature_389_residues
MYIDLTPEQHQLRLKIRDYFTELMTPELKSKLRGKEGGDDYRAVIEQIGKDGWLAVGWPKEFGGQGYQATEQLIFFEEAN
IAGAPLPFVTISTVGPALMQHGTEEQKQKFLPGIAKGEIIFAIGYSEPNAGSDLATLTTSAKVEQECFIVNGNKMWTSGA
ESADYIWLAARTDPEQARHKGISIMVVDTKTSGFSHTVIPTCSNPTAATYYDDVIVPKEMLVGELNHGWKLITSQLNHER
LGLGAWSDKVVSLYRKAYLWAKAKDEQGRCAMDNPWVRSALARCYSRLEAMRLINFRIAADLEQGKMDVALASITKVYGS
ESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRASVTLTFGGGTNEIQRELIAQFGLGLPRARN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=384, Percent_Identity=26.0416666666667, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI4501859, Length=331, Percent_Identity=28.0966767371601, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI4501857, Length=386, Percent_Identity=27.720207253886, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI226958414, Length=343, Percent_Identity=25.9475218658892, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI4557235, Length=343, Percent_Identity=27.6967930029155, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI76496475, Length=343, Percent_Identity=27.6967930029155, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4557233, Length=387, Percent_Identity=27.390180878553, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI7656849, Length=347, Percent_Identity=26.8011527377522, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI21361497, Length=395, Percent_Identity=25.0632911392405, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI187960098, Length=290, Percent_Identity=26.2068965517241, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4557231, Length=290, Percent_Identity=26.2068965517241, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4503943, Length=350, Percent_Identity=25.1428571428571, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI7669494, Length=350, Percent_Identity=25.1428571428571, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI211971008, Length=303, Percent_Identity=25.4125412541254, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI48976061, Length=303, Percent_Identity=25.4125412541254, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=382, Percent_Identity=24.6073298429319, Blast_Score=92, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=383, Percent_Identity=25.5874673629243, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17508101, Length=384, Percent_Identity=25.5208333333333, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI71990804, Length=287, Percent_Identity=27.1777003484321, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=350, Percent_Identity=26.8571428571429, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=403, Percent_Identity=24.8138957816377, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=392, Percent_Identity=24.234693877551, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=399, Percent_Identity=24.5614035087719, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=25.9946949602122, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=207, Percent_Identity=28.5024154589372, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17533517, Length=347, Percent_Identity=23.6311239193084, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=207, Percent_Identity=28.9855072463768, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=313, Percent_Identity=25.8785942492013, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=200, Percent_Identity=31.5, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17534353, Length=357, Percent_Identity=26.890756302521, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71982178, Length=192, Percent_Identity=30.2083333333333, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21355753, Length=384, Percent_Identity=25.78125, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24666513, Length=311, Percent_Identity=27.6527331189711, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=28.7206266318538, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21356377, Length=343, Percent_Identity=27.9883381924198, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281363737, Length=394, Percent_Identity=26.1421319796954, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI19920834, Length=363, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24660351, Length=287, Percent_Identity=26.1324041811847, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42977; Mature: 42977

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIDLTPEQHQLRLKIRDYFTELMTPELKSKLRGKEGGDDYRAVIEQIGKDGWLAVGWPK
CEECCCCCHHHEEEHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCH
EFGGQGYQATEQLIFFEEANIAGAPLPFVTISTVGPALMQHGTEEQKQKFLPGIAKGEII
HHCCCCCCCHHEEEEEEECCCCCCCCCEEEHHHCCHHHHHCCCHHHHHHHCCCCCCCCEE
FAIGYSEPNAGSDLATLTTSAKVEQECFIVNGNKMWTSGAESADYIWLAARTDPEQARHK
EEEECCCCCCCCCCEEEECCCCCCCEEEEEECCEEECCCCCCCCEEEEEECCCHHHHHHC
GISIMVVDTKTSGFSHTVIPTCSNPTAATYYDDVIVPKEMLVGELNHGWKLITSQLNHER
CCEEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHHHHCCCHH
LGLGAWSDKVVSLYRKAYLWAKAKDEQGRCAMDNPWVRSALARCYSRLEAMRLINFRIAA
CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
DLEQGKMDVALASITKVYGSESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRAS
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECEEEEEE
VTLTFGGGTNEIQRELIAQFGLGLPRARN
EEEEECCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYIDLTPEQHQLRLKIRDYFTELMTPELKSKLRGKEGGDDYRAVIEQIGKDGWLAVGWPK
CEECCCCCHHHEEEHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCH
EFGGQGYQATEQLIFFEEANIAGAPLPFVTISTVGPALMQHGTEEQKQKFLPGIAKGEII
HHCCCCCCCHHEEEEEEECCCCCCCCCEEEHHHCCHHHHHCCCHHHHHHHCCCCCCCCEE
FAIGYSEPNAGSDLATLTTSAKVEQECFIVNGNKMWTSGAESADYIWLAARTDPEQARHK
EEEECCCCCCCCCCEEEECCCCCCCEEEEEECCEEECCCCCCCCEEEEEECCCHHHHHHC
GISIMVVDTKTSGFSHTVIPTCSNPTAATYYDDVIVPKEMLVGELNHGWKLITSQLNHER
CCEEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHHHHCCCHH
LGLGAWSDKVVSLYRKAYLWAKAKDEQGRCAMDNPWVRSALARCYSRLEAMRLINFRIAA
CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
DLEQGKMDVALASITKVYGSESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVRAS
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECEEEEEE
VTLTFGGGTNEIQRELIAQFGLGLPRARN
EEEEECCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]