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The map label for this gene is 167624037

Identifier: 167624037

GI number: 167624037

Start: 2545073

End: 2546251

Strand: Direct

Name: 167624037

Synonym: Shal_2113

Alternate gene names: NA

Gene position: 2545073-2546251 (Clockwise)

Preceding gene: 167624036

Following gene: 167624038

Centisome position: 48.69

GC content: 46.06

Gene sequence:

>1179_bases
ATGGATGCATCGATCAGTGGTAAGGCTGCGATTGTTGGTTTAGGCGCTACTGAGTTTTCTAAAAACTCTGGGCGTACAGA
ATTACGCTTAGCAATGGAAGCGACTTTATCGGCACTTAAAGATGCCGGAATTGATCCTAGTGAAGTGGACGGTTTTTGTT
CTTACTCAGTAGATAAAGTGCCTGAGTATGAAGTAGCTCGTTTGCTTGGCTGTAAAGAAGTAAAGTTTTTCTCTCAAATC
CCCCATGGTGGCGGTGCTGCGTGTGCTCCTGTTATGCACGCTGCCATGGCCGTAGCCTCTGGCGTGGCTAAAACGGTAGT
CGTGTATCGCGCGATGAATGAACGCTCTTGGTATCGATTTGGGACTGGAGATTATGGTTTTGCAAATACTCCAACATTTG
AAAATGTAAATTATGGTTGGTACATGCCGCACGGTTTTCATACACCTGCATCATGGGTTGGTATGTTTGCTCAGCGATAT
ATGCATGAATATGGAGCAACATCAGAAGATTTCGGTCGTATTGCCGTTGCTGCACGTGATTTCGCTGCAACCAATCCTGC
TGCTTTTTTCCATAATAAGCCCATTACACTAGAAGAGCATCAAGCTTCTAGATGGATCTGTGAACCATTACATTTGCTCG
ATTGTTGTCAAGAGTCTGACGGAGCCGTTGCGATGGTTATCACCAGTGCCGAAAGAGCAAAAGACTTAAAGCAAAAAAGT
GTGGTGATAAAAGCGGGTGCACAAGGCATAGCACAAGGTCAGCAAGTCATGACGTCATTTTATCGTGAGGATATTACTGG
ACTGCCTGAAATGGGGATTGTTGCAAAAGAGCTTTATCAACAATCAAAGTTAGGTCCGGAAGACTTTCAGACAGCAATTA
TATATGACCACTTCACCCCGTTTGTATTGCCTCAACTTGAAGAGTTTGGTTTTGCAAAGCGTGGACAAGCGAAAGAGTTT
ATTCGCGCAGGTGAGCATGCTCGGGGCGGAAAGTTGCCGATTAACACCCATGGCGGCCAGCTTGGAGAAGCCTATATCCA
CGGCATGAATGGTATCGCCGAAGCGGTGCGCCAAGTACGTGGTTCGGCAGTAAACCAAGTCGATAATGTTGAAAACGTTT
TAGTTACGGCTGGAACCGGTGTACCAACCAGCGGTCTTATCTTAAGTGCAGAGGGCTAG

Upstream 100 bases:

>100_bases
GTTGTTAGCCTAGTAGGAAAGAACTCGATGGGCGCCCATGTTAGTGGCACTGTTTCTATTACATGGCCTCGCGATTTCGT
GCAATAAAAGGAGAATTTAG

Downstream 100 bases:

>100_bases
TTATGTATATTGATTTAACGCCAGAACAGCATCAATTGCGCTTAAAAATCCGAGATTACTTTACCGAGCTGATGACCCCT
GAACTCAAGTCAAAATTACG

Product: lipid-transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MDASISGKAAIVGLGATEFSKNSGRTELRLAMEATLSALKDAGIDPSEVDGFCSYSVDKVPEYEVARLLGCKEVKFFSQI
PHGGGAACAPVMHAAMAVASGVAKTVVVYRAMNERSWYRFGTGDYGFANTPTFENVNYGWYMPHGFHTPASWVGMFAQRY
MHEYGATSEDFGRIAVAARDFAATNPAAFFHNKPITLEEHQASRWICEPLHLLDCCQESDGAVAMVITSAERAKDLKQKS
VVIKAGAQGIAQGQQVMTSFYREDITGLPEMGIVAKELYQQSKLGPEDFQTAIIYDHFTPFVLPQLEEFGFAKRGQAKEF
IRAGEHARGGKLPINTHGGQLGEAYIHGMNGIAEAVRQVRGSAVNQVDNVENVLVTAGTGVPTSGLILSAEG

Sequences:

>Translated_392_residues
MDASISGKAAIVGLGATEFSKNSGRTELRLAMEATLSALKDAGIDPSEVDGFCSYSVDKVPEYEVARLLGCKEVKFFSQI
PHGGGAACAPVMHAAMAVASGVAKTVVVYRAMNERSWYRFGTGDYGFANTPTFENVNYGWYMPHGFHTPASWVGMFAQRY
MHEYGATSEDFGRIAVAARDFAATNPAAFFHNKPITLEEHQASRWICEPLHLLDCCQESDGAVAMVITSAERAKDLKQKS
VVIKAGAQGIAQGQQVMTSFYREDITGLPEMGIVAKELYQQSKLGPEDFQTAIIYDHFTPFVLPQLEEFGFAKRGQAKEF
IRAGEHARGGKLPINTHGGQLGEAYIHGMNGIAEAVRQVRGSAVNQVDNVENVLVTAGTGVPTSGLILSAEG
>Mature_392_residues
MDASISGKAAIVGLGATEFSKNSGRTELRLAMEATLSALKDAGIDPSEVDGFCSYSVDKVPEYEVARLLGCKEVKFFSQI
PHGGGAACAPVMHAAMAVASGVAKTVVVYRAMNERSWYRFGTGDYGFANTPTFENVNYGWYMPHGFHTPASWVGMFAQRY
MHEYGATSEDFGRIAVAARDFAATNPAAFFHNKPITLEEHQASRWICEPLHLLDCCQESDGAVAMVITSAERAKDLKQKS
VVIKAGAQGIAQGQQVMTSFYREDITGLPEMGIVAKELYQQSKLGPEDFQTAIIYDHFTPFVLPQLEEFGFAKRGQAKEF
IRAGEHARGGKLPINTHGGQLGEAYIHGMNGIAEAVRQVRGSAVNQVDNVENVLVTAGTGVPTSGLILSAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923233, Length=377, Percent_Identity=25.7294429708223, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI302344760, Length=222, Percent_Identity=28.8288288288288, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI302344767, Length=222, Percent_Identity=28.8288288288288, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI302344762, Length=222, Percent_Identity=28.8288288288288, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI55956775, Length=207, Percent_Identity=28.5024154589372, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17537653, Length=229, Percent_Identity=29.6943231441048, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19921506, Length=392, Percent_Identity=26.0204081632653, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585051, Length=392, Percent_Identity=26.2755102040816, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020617
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: NA

Molecular weight: Translated: 42317; Mature: 42317

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00097 CARBAMOYLTRANSFERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASISGKAAIVGLGATEFSKNSGRTELRLAMEATLSALKDAGIDPSEVDGFCSYSVDKV
CCCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
PEYEVARLLGCKEVKFFSQIPHGGGAACAPVMHAAMAVASGVAKTVVVYRAMNERSWYRF
CCHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
GTGDYGFANTPTFENVNYGWYMPHGFHTPASWVGMFAQRYMHEYGATSEDFGRIAVAARD
CCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEHH
FAATNPAAFFHNKPITLEEHQASRWICEPLHLLDCCQESDGAVAMVITSAERAKDLKQKS
HCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHH
VVIKAGAQGIAQGQQVMTSFYREDITGLPEMGIVAKELYQQSKLGPEDFQTAIIYDHFTP
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCEEEEEECCCC
FVLPQLEEFGFAKRGQAKEFIRAGEHARGGKLPINTHGGQLGEAYIHGMNGIAEAVRQVR
HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHH
GSAVNQVDNVENVLVTAGTGVPTSGLILSAEG
HHHHHHHHCCCEEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MDASISGKAAIVGLGATEFSKNSGRTELRLAMEATLSALKDAGIDPSEVDGFCSYSVDKV
CCCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
PEYEVARLLGCKEVKFFSQIPHGGGAACAPVMHAAMAVASGVAKTVVVYRAMNERSWYRF
CCHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
GTGDYGFANTPTFENVNYGWYMPHGFHTPASWVGMFAQRYMHEYGATSEDFGRIAVAARD
CCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEHH
FAATNPAAFFHNKPITLEEHQASRWICEPLHLLDCCQESDGAVAMVITSAERAKDLKQKS
HCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHH
VVIKAGAQGIAQGQQVMTSFYREDITGLPEMGIVAKELYQQSKLGPEDFQTAIIYDHFTP
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCEEEEEECCCC
FVLPQLEEFGFAKRGQAKEFIRAGEHARGGKLPINTHGGQLGEAYIHGMNGIAEAVRQVR
HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHH
GSAVNQVDNVENVLVTAGTGVPTSGLILSAEG
HHHHHHHHCCCEEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]