| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is ntaB [H]
Identifier: 167624015
GI number: 167624015
Start: 2516276
End: 2517244
Strand: Reverse
Name: ntaB [H]
Synonym: Shal_2091
Alternate gene names: 167624015
Gene position: 2517244-2516276 (Counterclockwise)
Preceding gene: 167624017
Following gene: 167624014
Centisome position: 48.16
GC content: 45.2
Gene sequence:
>969_bases ATGTCAAATCCAAATTTTGATACAAAGGCATTTCGAAATGCGCTAGGGACCTTTACCACCGGGGTTACCATTATCACAAC CAAAGCTGCAGATGGCACCGAAGTCGGTTTAACCGCTAACAGCTTTAACTCTGTATCACTTGATCCGCCATTGGTACTTT GGAGTCTTGCTAAATCGGCGATGAGTGTGCCGGTTTTTAATGCAGCGGACCATTGGAACGTTCATGTGTTATCTAGTGAT CAACAAGAACTATCAGGGCGATTTGCATCACGAGGCGAAGATAAGTTCTCAGGTTTATTACAAGATGAGGGGGTCAGTTC TGCTCCCTTGCTTCAGGGATGTGCTGCGCGTTTTCAATGCCGTAATGCTTTTATCCACGATGGTGGTGACCACATCATAT TCATTGGTGAAGTATTGGACTTTGACCGCAATGATCAGGCGCCTCTCGCCTTCCATAGTGGACAATATGCGCTCACCGTT CCACAGCCTTGGGAAGAGGTAAACCTTAGTCAGGCTGAAGACACGCTAGCCTGCAGTTACAACGAAGATCTTCTTGGCTA TCTACTGGGGCGATCACACTTTCAAATGCTCAATAAAATGCGTTCAGTATTAACTGAGCACTTATTACAAGACATCCACT TCTTCGCTCTATCAGTGCTGTCGATAAGTGACGGTCTCGAGCTGGCGCAGCTTAACACTCATATCGAATACACTGGCCGA TGCGTAAGTGACGCTCAGTTGCAACATATGGTTAATAGTAATTTACTCAAAAAAACTGAACAGCGTTACTTTTTGACCGA ACAGGGACGCCAAGTTTCATTCCAGCAAATTGCTCAAGCGAAAGCCATTGAAAATGAGCTAGTTGACGGTCTTAGCCAAG GTGAAATAAACGCACTAAAACTGCTGTTGAAACAAATAATTAAACGCACAGACCCGGGGCTACCCGATCTGTGGTCAAAA GTGTCTTAG
Upstream 100 bases:
>100_bases AAGACGATGATTGCCTTACCTGTCAACATGATACTGATATCTATGATTGCATACCATTTAGGGTTTGCTCCGCATATTGT GCTCGACAGAGGGATAAGTA
Downstream 100 bases:
>100_bases GAGTACGTAATGGTCGATAAAGTAAAAGCAACAACCAATAGCTCTCTTATCGAAATGCATGCCGAAGAGTTACTTTTAGC ACTCAGGAAAGGTGAAGCGA
Product: flavin reductase domain-containing protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: NTA monooxygenase component B; NTA-MO B [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSNPNFDTKAFRNALGTFTTGVTIITTKAADGTEVGLTANSFNSVSLDPPLVLWSLAKSAMSVPVFNAADHWNVHVLSSD QQELSGRFASRGEDKFSGLLQDEGVSSAPLLQGCAARFQCRNAFIHDGGDHIIFIGEVLDFDRNDQAPLAFHSGQYALTV PQPWEEVNLSQAEDTLACSYNEDLLGYLLGRSHFQMLNKMRSVLTEHLLQDIHFFALSVLSISDGLELAQLNTHIEYTGR CVSDAQLQHMVNSNLLKKTEQRYFLTEQGRQVSFQQIAQAKAIENELVDGLSQGEINALKLLLKQIIKRTDPGLPDLWSK VS
Sequences:
>Translated_322_residues MSNPNFDTKAFRNALGTFTTGVTIITTKAADGTEVGLTANSFNSVSLDPPLVLWSLAKSAMSVPVFNAADHWNVHVLSSD QQELSGRFASRGEDKFSGLLQDEGVSSAPLLQGCAARFQCRNAFIHDGGDHIIFIGEVLDFDRNDQAPLAFHSGQYALTV PQPWEEVNLSQAEDTLACSYNEDLLGYLLGRSHFQMLNKMRSVLTEHLLQDIHFFALSVLSISDGLELAQLNTHIEYTGR CVSDAQLQHMVNSNLLKKTEQRYFLTEQGRQVSFQQIAQAKAIENELVDGLSQGEINALKLLLKQIIKRTDPGLPDLWSK VS >Mature_321_residues SNPNFDTKAFRNALGTFTTGVTIITTKAADGTEVGLTANSFNSVSLDPPLVLWSLAKSAMSVPVFNAADHWNVHVLSSDQ QELSGRFASRGEDKFSGLLQDEGVSSAPLLQGCAARFQCRNAFIHDGGDHIIFIGEVLDFDRNDQAPLAFHSGQYALTVP QPWEEVNLSQAEDTLACSYNEDLLGYLLGRSHFQMLNKMRSVLTEHLLQDIHFFALSVLSISDGLELAQLNTHIEYTGRC VSDAQLQHMVNSNLLKKTEQRYFLTEQGRQVSFQQIAQAKAIENELVDGLSQGEINALKLLLKQIIKRTDPGLPDLWSKV S
Specific function: Hydroxylation of nitrilotriacetate [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011991 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 35583; Mature: 35452
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPNFDTKAFRNALGTFTTGVTIITTKAADGTEVGLTANSFNSVSLDPPLVLWSLAKSA CCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH MSVPVFNAADHWNVHVLSSDQQELSGRFASRGEDKFSGLLQDEGVSSAPLLQGCAARFQC HCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH RNAFIHDGGDHIIFIGEVLDFDRNDQAPLAFHSGQYALTVPQPWEEVNLSQAEDTLACSY HHCCEECCCCEEEEEEHHHCCCCCCCCCEEEECCCEEEECCCCHHHCCCCCCCCCEEECC NEDLLGYLLGRSHFQMLNKMRSVLTEHLLQDIHFFALSVLSISDGLELAQLNTHIEYTGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEECCC CVSDAQLQHMVNSNLLKKTEQRYFLTEQGRQVSFQQIAQAKAIENELVDGLSQGEINALK CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH LLLKQIIKRTDPGLPDLWSKVS HHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure SNPNFDTKAFRNALGTFTTGVTIITTKAADGTEVGLTANSFNSVSLDPPLVLWSLAKSA CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH MSVPVFNAADHWNVHVLSSDQQELSGRFASRGEDKFSGLLQDEGVSSAPLLQGCAARFQC HCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH RNAFIHDGGDHIIFIGEVLDFDRNDQAPLAFHSGQYALTVPQPWEEVNLSQAEDTLACSY HHCCEECCCCEEEEEEHHHCCCCCCCCCEEEECCCEEEECCCCHHHCCCCCCCCCEEECC NEDLLGYLLGRSHFQMLNKMRSVLTEHLLQDIHFFALSVLSISDGLELAQLNTHIEYTGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEECCC CVSDAQLQHMVNSNLLKKTEQRYFLTEQGRQVSFQQIAQAKAIENELVDGLSQGEINALK CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH LLLKQIIKRTDPGLPDLWSKVS HHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892809; 9023192; 1735711 [H]