| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is mhpF [C]
Identifier: 167624013
GI number: 167624013
Start: 2514483
End: 2515406
Strand: Reverse
Name: mhpF [C]
Synonym: Shal_2089
Alternate gene names: 167624013
Gene position: 2515406-2514483 (Counterclockwise)
Preceding gene: 167624014
Following gene: 167624012
Centisome position: 48.12
GC content: 46.21
Gene sequence:
>924_bases ATGACAAGTAAAATAAAATGTGCGCTGATTGGCTCTGGCAATATTGGCACCGACCTACTCTACAAATTAATGCGCAGTGA TGTGCTTGAGCCTGTATGGATGGTGGGAATCGATCCGGAGTCTGATGGATTAGCTAGAGCTAAAGCCGCCGGGCTGAAGG TGACCGCAGACGGCATCAATGGCTTACTGCCGTTTGTTGAAGCCGATGAGATTAAAATCGCCTTTGATGCTACATCTGCA TACGTACATGCAGAGAACTCACGAAAATTAAATGAATTAGGGGTGGTGATGATTGACTTAACCCCAGCGGCAATTGGTCC TTTTTGCGTTCCCCCGGTTAACCTTTCTCAACTCGATGAAAATGTAAAAAATATTAATATGGTCACCTGCGGCGGCCAAG CAACTATCCCAATGGTTGCTGCGGTTTCACGAGTACAAGCGGTAGAGTACGGCGAAATTGTTGCTACGGTTTCATCCCGC TCTGTAGGCCCCGGTACTCGGCAAAACATTGATGAGTTTACTCGTACAACGGCTGGCGCAGTGGAACAAATTGGTGGTGC AGAAAAAGGCAAAGCGATTATTGTCATTAACCCTGCTGAACCGCCGTTATTGATGCGAGATACCATTCACTGCCTAACAA AAGAACAACCTGATGAACAGGCAATTACAGCATCTGTCCACGAGATGATTGAACAAGTTCAACAGTATGTACCGGGTTAC ACACTTAAAAATGGTCCTGTATTTGATGGCCGTAAAGTCACCATATTTTTAGAAGTTGAAGGTCTTGGAGATTACTTACC AAAGTACGCAGGTAACCTCGACATAATGACCGCCGCAGCAGCAAGAACAGCAGAGATGCTAGCGTCCAAAATGCTCAATC CTGAACCCCATTACAATGTTACCCAAGAAGCGGCGCTAGCCTAG
Upstream 100 bases:
>100_bases AATTCACCATGGAAATTGAAGGCTTGGGAAGCTGCAGCATCAGCTTTTGCGACTAACACAGATTAGACATCAGCACGGAA ATAACAGAAGGAATACCGAC
Downstream 100 bases:
>100_bases GAGTCCATGATGAATTTAACGGGAAAAAAAGTTATTTTACACGACATGTCATTAAGAGATGGCATGCATGCTCGCCAACA TCAAATTACTTTGAAAGAGA
Product: acetaldehyde dehydrogenase
Products: NA
Alternate protein names: Acetaldehyde dehydrogenase [acetylating]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTSKIKCALIGSGNIGTDLLYKLMRSDVLEPVWMVGIDPESDGLARAKAAGLKVTADGINGLLPFVEADEIKIAFDATSA YVHAENSRKLNELGVVMIDLTPAAIGPFCVPPVNLSQLDENVKNINMVTCGGQATIPMVAAVSRVQAVEYGEIVATVSSR SVGPGTRQNIDEFTRTTAGAVEQIGGAEKGKAIIVINPAEPPLLMRDTIHCLTKEQPDEQAITASVHEMIEQVQQYVPGY TLKNGPVFDGRKVTIFLEVEGLGDYLPKYAGNLDIMTAAAARTAEMLASKMLNPEPHYNVTQEAALA
Sequences:
>Translated_307_residues MTSKIKCALIGSGNIGTDLLYKLMRSDVLEPVWMVGIDPESDGLARAKAAGLKVTADGINGLLPFVEADEIKIAFDATSA YVHAENSRKLNELGVVMIDLTPAAIGPFCVPPVNLSQLDENVKNINMVTCGGQATIPMVAAVSRVQAVEYGEIVATVSSR SVGPGTRQNIDEFTRTTAGAVEQIGGAEKGKAIIVINPAEPPLLMRDTIHCLTKEQPDEQAITASVHEMIEQVQQYVPGY TLKNGPVFDGRKVTIFLEVEGLGDYLPKYAGNLDIMTAAAARTAEMLASKMLNPEPHYNVTQEAALA >Mature_306_residues TSKIKCALIGSGNIGTDLLYKLMRSDVLEPVWMVGIDPESDGLARAKAAGLKVTADGINGLLPFVEADEIKIAFDATSAY VHAENSRKLNELGVVMIDLTPAAIGPFCVPPVNLSQLDENVKNINMVTCGGQATIPMVAAVSRVQAVEYGEIVATVSSRS VGPGTRQNIDEFTRTTAGAVEQIGGAEKGKAIIVINPAEPPLLMRDTIHCLTKEQPDEQAITASVHEMIEQVQQYVPGYT LKNGPVFDGRKVTIFLEVEGLGDYLPKYAGNLDIMTAAAARTAEMLASKMLNPEPHYNVTQEAALA
Specific function: Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds
COG id: COG4569
COG function: function code Q; Acetaldehyde dehydrogenase (acetylating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetaldehyde dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1786547, Length=309, Percent_Identity=55.9870550161812, Blast_Score=319, Evalue=1e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACDH_SHEHH (B0TTT0)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001674307.1 - ProteinModelPortal: B0TTT0 - SMR: B0TTT0 - GeneID: 5902820 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_2089 - HOGENOM: HBG300125 - OMA: IGGAQRG - ProtClustDB: PRK08300 - BioCyc: SHAL458817:SHAL_2089-MONOMER - GO: GO:0005737 - HAMAP: MF_01657 - InterPro: IPR003361 - InterPro: IPR015426 - InterPro: IPR016040 - InterPro: IPR000534 - Gene3D: G3DSA:3.40.50.720 - PANTHER: PTHR21123 - PIRSF: PIRSF015689 - SMART: SM00859 - TIGRFAMs: TIGR03215
Pfam domain/function: PF09290 AcetDehyd-dimer; PF01118 Semialdhyde_dh
EC number: =1.2.1.10
Molecular weight: Translated: 32766; Mature: 32635
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: BINDING 272-272
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKIKCALIGSGNIGTDLLYKLMRSDVLEPVWMVGIDPESDGLARAKAAGLKVTADGIN CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCEEEECCCC GLLPFVEADEIKIAFDATSAYVHAENSRKLNELGVVMIDLTPAAIGPFCVPPVNLSQLDE CCCCCEECCCEEEEEECCEEEEECCCCCCHHHCCEEEEEECHHHCCCCCCCCCCHHHHHH NVKNINMVTCGGQATIPMVAAVSRVQAVEYGEIVATVSSRSVGPGTRQNIDEFTRTTAGA HHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHH VEQIGGAEKGKAIIVINPAEPPLLMRDTIHCLTKEQPDEQAITASVHEMIEQVQQYVPGY HHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCE TLKNGPVFDGRKVTIFLEVEGLGDYLPKYAGNLDIMTAAAARTAEMLASKMLNPEPHYNV EECCCCEECCEEEEEEEEECCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC TQEAALA CHHHHCC >Mature Secondary Structure TSKIKCALIGSGNIGTDLLYKLMRSDVLEPVWMVGIDPESDGLARAKAAGLKVTADGIN CCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCEEEECCCC GLLPFVEADEIKIAFDATSAYVHAENSRKLNELGVVMIDLTPAAIGPFCVPPVNLSQLDE CCCCCEECCCEEEEEECCEEEEECCCCCCHHHCCEEEEEECHHHCCCCCCCCCCHHHHHH NVKNINMVTCGGQATIPMVAAVSRVQAVEYGEIVATVSSRSVGPGTRQNIDEFTRTTAGA HHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHH VEQIGGAEKGKAIIVINPAEPPLLMRDTIHCLTKEQPDEQAITASVHEMIEQVQQYVPGY HHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCE TLKNGPVFDGRKVTIFLEVEGLGDYLPKYAGNLDIMTAAAARTAEMLASKMLNPEPHYNV EECCCCEECCEEEEEEEEECCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC TQEAALA CHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA