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The map label for this gene is cbbGC [H]

Identifier: 167624000

GI number: 167624000

Start: 2501029

End: 2502039

Strand: Reverse

Name: cbbGC [H]

Synonym: Shal_2076

Alternate gene names: 167624000

Gene position: 2502039-2501029 (Counterclockwise)

Preceding gene: 167624001

Following gene: 167623995

Centisome position: 47.87

GC content: 44.02

Gene sequence:

>1011_bases
ATGACTATCCGAGTTGCAATTAACGGCTATGGCCGTATCGGCCGCAATGTTCTACGTGCTCTATATGAAAGCGAAAAGAA
CTATCCTATCAAGATTGTTGCGCTTAACGATTTAGGTGACGCTTCAATCAACGCTCATTTAACTAAGTACGATTCAGTAC
ACGGACGCTTTAACGCCAAAGTTGAGCACACTGATGACGCTATTTTTGTTAACGAAGATAAGATCCTGACCTTCCAAGAG
CGCGATCCTTCAAAGCTTCCTTGGAAAGAACTTGATATCGATGTGGTATTTGAATGTACCGGTATCTTCACTTCTAAAGA
GTCTGTTCAATCTCATTTAGATGCTGGTGCAAAGAAAGTGCTTATTTCTGCTCCAGGAAAGAATGTAGATGCGACTGTTG
TTTACGGCGTAAACAACGACGTTATCACCAGTGATATGACCGTAATTTCAAACGCCTCTTGTACAACTAACTGTTTAGCC
CCTTTCGCTAAGCCGTTAAATGATGAGATTGGTATTGAATCTGGTTTGATGACAACAATTCATGCTTACACAAACGACCA
ACGTTTGTCTGACGTTTACCACACCGACTTGCGCCGTGCACGCGCTGCAGCAATGTCTATGATCCCAACACAAACAGGCG
CTGCTGCCGCTGTTGGCCTTGTGGTTCCAGAGCTTGCGGGTAAATTTGACGGACTAGCCGTACGTGTACCGACTGTAAAC
GTTTCATTGGTCGACTTATCTTTTATCGCTGCACGCGACACGAGTGTTGAAGAGATCAATGCCATCATTGAGAAAGCCGC
TTCAGTAGCACCATTAAGCGAAGTCTTGGCTGTAAACCATGAGCCATTGGTATCAATTGATTTCAACCATAACCCATTCT
CTTCGAACTTTGACGCAACTCAAACTCGCGTTAATGGTCGTTTAGTAAAAGTTATGGCATGGTACGACAACGAATGGGGC
TTCAGTAACCGCATGCTAGATAATGCTGTTGCACTGATGACTGCTAAGTAA

Upstream 100 bases:

>100_bases
ATAAAGTCGCTTTTATCGTCGATATAACTTGACGATAGCTGTCAATTTGGTAATTTTACTACCAGATATATTTTTTATAC
ATTTACCTGAGGGATATGAG

Downstream 100 bases:

>100_bases
TTCGTCTGTTTTACTAAAAACCCAGCTTAGGCTGGGTTTTTTTATACACTTAAAAACTCAAAACAGTTTCTGCCACGCTT
TTTTGCTTGGTACATAAGTA

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTIRVAINGYGRIGRNVLRALYESEKNYPIKIVALNDLGDASINAHLTKYDSVHGRFNAKVEHTDDAIFVNEDKILTFQE
RDPSKLPWKELDIDVVFECTGIFTSKESVQSHLDAGAKKVLISAPGKNVDATVVYGVNNDVITSDMTVISNASCTTNCLA
PFAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAAMSMIPTQTGAAAAVGLVVPELAGKFDGLAVRVPTVN
VSLVDLSFIAARDTSVEEINAIIEKAASVAPLSEVLAVNHEPLVSIDFNHNPFSSNFDATQTRVNGRLVKVMAWYDNEWG
FSNRMLDNAVALMTAK

Sequences:

>Translated_336_residues
MTIRVAINGYGRIGRNVLRALYESEKNYPIKIVALNDLGDASINAHLTKYDSVHGRFNAKVEHTDDAIFVNEDKILTFQE
RDPSKLPWKELDIDVVFECTGIFTSKESVQSHLDAGAKKVLISAPGKNVDATVVYGVNNDVITSDMTVISNASCTTNCLA
PFAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAAMSMIPTQTGAAAAVGLVVPELAGKFDGLAVRVPTVN
VSLVDLSFIAARDTSVEEINAIIEKAASVAPLSEVLAVNHEPLVSIDFNHNPFSSNFDATQTRVNGRLVKVMAWYDNEWG
FSNRMLDNAVALMTAK
>Mature_335_residues
TIRVAINGYGRIGRNVLRALYESEKNYPIKIVALNDLGDASINAHLTKYDSVHGRFNAKVEHTDDAIFVNEDKILTFQER
DPSKLPWKELDIDVVFECTGIFTSKESVQSHLDAGAKKVLISAPGKNVDATVVYGVNNDVITSDMTVISNASCTTNCLAP
FAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAAMSMIPTQTGAAAAVGLVVPELAGKFDGLAVRVPTVNV
SLVDLSFIAARDTSVEEINAIIEKAASVAPLSEVLAVNHEPLVSIDFNHNPFSSNFDATQTRVNGRLVKVMAWYDNEWGF
SNRMLDNAVALMTAK

Specific function: Could Play A Role In Pyridoxal 5'-Phosphate Synthesis. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7669492, Length=329, Percent_Identity=45.2887537993921, Blast_Score=275, Evalue=4e-74,
Organism=Homo sapiens, GI7657116, Length=329, Percent_Identity=42.2492401215805, Blast_Score=251, Evalue=6e-67,
Organism=Escherichia coli, GI1789295, Length=336, Percent_Identity=51.4880952380952, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI1788079, Length=329, Percent_Identity=48.3282674772036, Blast_Score=292, Evalue=2e-80,
Organism=Caenorhabditis elegans, GI17534677, Length=332, Percent_Identity=45.7831325301205, Blast_Score=268, Evalue=4e-72,
Organism=Caenorhabditis elegans, GI17534679, Length=332, Percent_Identity=45.7831325301205, Blast_Score=266, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI32566163, Length=332, Percent_Identity=45.1807228915663, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17568413, Length=332, Percent_Identity=45.1807228915663, Blast_Score=258, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6322468, Length=328, Percent_Identity=48.4756097560976, Blast_Score=302, Evalue=6e-83,
Organism=Saccharomyces cerevisiae, GI6321631, Length=328, Percent_Identity=47.5609756097561, Blast_Score=296, Evalue=3e-81,
Organism=Saccharomyces cerevisiae, GI6322409, Length=328, Percent_Identity=46.9512195121951, Blast_Score=293, Evalue=2e-80,
Organism=Drosophila melanogaster, GI17933600, Length=328, Percent_Identity=46.6463414634146, Blast_Score=272, Evalue=2e-73,
Organism=Drosophila melanogaster, GI18110149, Length=328, Percent_Identity=46.6463414634146, Blast_Score=272, Evalue=2e-73,
Organism=Drosophila melanogaster, GI85725000, Length=328, Percent_Identity=46.6463414634146, Blast_Score=270, Evalue=9e-73,
Organism=Drosophila melanogaster, GI22023983, Length=328, Percent_Identity=46.6463414634146, Blast_Score=270, Evalue=9e-73,
Organism=Drosophila melanogaster, GI19922412, Length=328, Percent_Identity=44.8170731707317, Blast_Score=256, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 36629; Mature: 36498

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVAINGYGRIGRNVLRALYESEKNYPIKIVALNDLGDASINAHLTKYDSVHGRFNAK
CEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEE
VEHTDDAIFVNEDKILTFQERDPSKLPWKELDIDVVFECTGIFTSKESVQSHLDAGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCHHHCCEEEEEEEEEEECCHHHHHHHHCCCCEEE
LISAPGKNVDATVVYGVNNDVITSDMTVISNASCTTNCLAPFAKPLNDEIGIESGLMTTI
EEECCCCCCCEEEEEECCCCEEECCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEE
HAYTNDQRLSDVYHTDLRRARAAAMSMIPTQTGAAAAVGLVVPELAGKFDGLAVRVPTVN
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
VSLVDLSFIAARDTSVEEINAIIEKAASVAPLSEVLAVNHEPLVSIDFNHNPFSSNFDAT
EEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCH
QTRVNGRLVKVMAWYDNEWGFSNRMLDNAVALMTAK
HEECCCEEEEEEEEECCCCCCCHHHHHCEEEEEECC
>Mature Secondary Structure 
TIRVAINGYGRIGRNVLRALYESEKNYPIKIVALNDLGDASINAHLTKYDSVHGRFNAK
EEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEE
VEHTDDAIFVNEDKILTFQERDPSKLPWKELDIDVVFECTGIFTSKESVQSHLDAGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCHHHCCEEEEEEEEEEECCHHHHHHHHCCCCEEE
LISAPGKNVDATVVYGVNNDVITSDMTVISNASCTTNCLAPFAKPLNDEIGIESGLMTTI
EEECCCCCCCEEEEEECCCCEEECCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEE
HAYTNDQRLSDVYHTDLRRARAAAMSMIPTQTGAAAAVGLVVPELAGKFDGLAVRVPTVN
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
VSLVDLSFIAARDTSVEEINAIIEKAASVAPLSEVLAVNHEPLVSIDFNHNPFSSNFDAT
EEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCH
QTRVNGRLVKVMAWYDNEWGFSNRMLDNAVALMTAK
HEECCCEEEEEEEEECCCCCCCHHHHHCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763137 [H]