Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623994

Identifier: 167623994

GI number: 167623994

Start: 2492960

End: 2493466

Strand: Direct

Name: 167623994

Synonym: Shal_2068

Alternate gene names: NA

Gene position: 2492960-2493466 (Clockwise)

Preceding gene: 167623992

Following gene: 167623996

Centisome position: 47.69

GC content: 39.84

Gene sequence:

>507_bases
ATGCAAAAGAAAATAGATAACGCAGGGCAGAGTTGGCAGTACCATCAACAGAAACCGACAGCTGGCCGGAAATTAAAATT
GCTTGAAGCGGAAGAGTTGCTTGTCGCATTACCTCTTATCTATCGACTCATCTCTTTGGCTGAAGTCGAAAAGAGAAAAG
ATTGGTTTTGTGAATTTGAAAAAACAGGTGAACGCGAACAGCTCTATATCATGCTGACCGAAAGTTTGTCGTCTCTCAAT
AAGATCCGCAAACAAGCGAATGGTGTCGATAATGCTCTGGAACAAACCAATCTACTGCTTAACCGCTACTTTAGTGATCA
TGGTTGGAGAATGGTGCGAAAGGAGCTATCGCAAATTAAGAAACGTAAAAAGAAATCCCACATCGAGATAGGCAATGATC
TTGTCATCAAACTAAAAGAATTTATGGCTTCCAATCAAATCGATACTTTTGATCAGGCCATTGATCATCTATTGAGTGAA
TATCCGAAATCAAGTGAAGAGAATTGA

Upstream 100 bases:

>100_bases
AGTGCGACAATTAAATTATTATATGGTTGCACCATACTTTTAATGTTTTGGTTTGTTACCCGTAACGTGTGGTGAAATAA
TCGATTGAGAATGGAATTGA

Downstream 100 bases:

>100_bases
GTTACAGTCCTAATCCACAGATAGGCTCGTTTAGATGAGTTCACTAACTATCTAATTAAGTAATTAGTTAATTAAATGGC
TAACTAAGCTAGCCCTCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MQKKIDNAGQSWQYHQQKPTAGRKLKLLEAEELLVALPLIYRLISLAEVEKRKDWFCEFEKTGEREQLYIMLTESLSSLN
KIRKQANGVDNALEQTNLLLNRYFSDHGWRMVRKELSQIKKRKKKSHIEIGNDLVIKLKEFMASNQIDTFDQAIDHLLSE
YPKSSEEN

Sequences:

>Translated_168_residues
MQKKIDNAGQSWQYHQQKPTAGRKLKLLEAEELLVALPLIYRLISLAEVEKRKDWFCEFEKTGEREQLYIMLTESLSSLN
KIRKQANGVDNALEQTNLLLNRYFSDHGWRMVRKELSQIKKRKKKSHIEIGNDLVIKLKEFMASNQIDTFDQAIDHLLSE
YPKSSEEN
>Mature_168_residues
MQKKIDNAGQSWQYHQQKPTAGRKLKLLEAEELLVALPLIYRLISLAEVEKRKDWFCEFEKTGEREQLYIMLTESLSSLN
KIRKQANGVDNALEQTNLLLNRYFSDHGWRMVRKELSQIKKRKKKSHIEIGNDLVIKLKEFMASNQIDTFDQAIDHLLSE
YPKSSEEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19752; Mature: 19752

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKIDNAGQSWQYHQQKPTAGRKLKLLEAEELLVALPLIYRLISLAEVEKRKDWFCEFE
CCCCCCCCCCCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTGEREQLYIMLTESLSSLNKIRKQANGVDNALEQTNLLLNRYFSDHGWRMVRKELSQIK
CCCCCHHEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRKKKSHIEIGNDLVIKLKEFMASNQIDTFDQAIDHLLSEYPKSSEEN
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQKKIDNAGQSWQYHQQKPTAGRKLKLLEAEELLVALPLIYRLISLAEVEKRKDWFCEFE
CCCCCCCCCCCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTGEREQLYIMLTESLSSLNKIRKQANGVDNALEQTNLLLNRYFSDHGWRMVRKELSQIK
CCCCCHHEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRKKKSHIEIGNDLVIKLKEFMASNQIDTFDQAIDHLLSEYPKSSEEN
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA