| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is aroA
Identifier: 167623969
GI number: 167623969
Start: 2466009
End: 2467289
Strand: Direct
Name: aroA
Synonym: Shal_2043
Alternate gene names: 167623969
Gene position: 2466009-2467289 (Clockwise)
Preceding gene: 167623967
Following gene: 167623970
Centisome position: 47.18
GC content: 45.43
Gene sequence:
>1281_bases ATGAATCAATTACGTTTAGAGCCGATTAAAAAAGTATCAGGTACCATTAATATTCCTGGTTCAAAGAGTATCTCAAATCG TGCTTTATTATTGGCGACACTCGCTAGTGGAACCACGACACTCACCAATTTACTCGACTCCGATGATATTCGTTATATGT TGGCCTCGCTTAAGCAGTTAGGCGTCAGCTATCGTTTATCAAATAACAACACAGTTTGTGAATTAGATGGCTTAGCCGGT CCATTAAATGCGGGTGAGCCACAAACGCTATTTTTAGGTAATGCTGGCACTGCTATGCGGCCTTTGTGCGCTGCGCTGAC ATTAGGCCAAGGTCAGTTTACCTTAACAGGTGAGCCGCGAATGGAAGAGCGTCCTATTGGCGATCTCGTCGACGCGCTGC GCCAACTTGGTGCCGAGGTAAGCTATCTTAAAAATGAAGGCTTTCCGCCGCTAAATATCACTTCTACCGGTTTAAATGGT GGCAATGTCGAGATTGCGGGCGATCTATCCAGCCAGTTTTTAACGGCACTACTGATGGTTGCGCCACTGGCCAAAGGCGA TGTCAATATCAAGATTAAAGGCGAGCTTGTCTCAAAACCTTATATCGATATTACGCTTGCTTTGATGGCGCAGTTTGGCG TCGAAGTGCAAAACAATGACTACGCCTCATTCGTCATTAAAGCGGGTCAGCGTTATGTGTCACCTGGAAAAGTACTCGTA GAAGGTGATGCGTCATCGGCATCATATTTTCTTGCTGCCGGAGCGATTCAAGGTGGAGAAGTAAAAGTTACTGGTGTAGG CAAGCTCAGTATTCAAGGTGATGTTAAGTTTGCCGATGTGCTCGAGCAAATGGGTGCAGATATAGAATGGGGCGATGATT ACATTATCGCTCGTCAAGCAAAGCTAAAAGCGGTTGATCTTGATATGAATCATATCCCAGATGCGGCGATGACGATTGCA ACTGCTGCGCTGTTTGCGACAGGTACAACCCGTATTCGCAATATTTATAACTGGCGTATTAAAGAGACCGATCGCCTTGC AGCGATGGCAACAGAACTGCGAAAGGTAGGGGCGATTGTGGATGAAGGTCATGACTACATTAGTGTGACGCCACCCGCTA AGTTAAATACTGCGGCAATTGATACCTACAATGATCACCGTATGGCGATGTGCTTTTCTATGATGGCATTTGCTGATTGC GGGATCACCATTAATGAACCTGAGTGTACGTCTAAAACATTCCCTGATTATTTCAATCAATTCAACGCGCTTGCTAACTA A
Upstream 100 bases:
>100_bases CTAAATCCTATCCGATTAGGAGCAAAAGCCGTCTTGCATGAACATCTACTGTTAACCCGCGGGCGAGTTTGACTCCTGCA GCAATAATAAGAAGTACGGA
Downstream 100 bases:
>100_bases GCGTGCACCACGATAAACAGTGATAGCTTTCAGGTTAATCGTGGTTAACCTGAAGGTTTGCTGAACCAAGTTCCCGAATA TTTGAAGTTTTTGCCGCTTT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MNQLRLEPIKKVSGTINIPGSKSISNRALLLATLASGTTTLTNLLDSDDIRYMLASLKQLGVSYRLSNNNTVCELDGLAG PLNAGEPQTLFLGNAGTAMRPLCAALTLGQGQFTLTGEPRMEERPIGDLVDALRQLGAEVSYLKNEGFPPLNITSTGLNG GNVEIAGDLSSQFLTALLMVAPLAKGDVNIKIKGELVSKPYIDITLALMAQFGVEVQNNDYASFVIKAGQRYVSPGKVLV EGDASSASYFLAAGAIQGGEVKVTGVGKLSIQGDVKFADVLEQMGADIEWGDDYIIARQAKLKAVDLDMNHIPDAAMTIA TAALFATGTTRIRNIYNWRIKETDRLAAMATELRKVGAIVDEGHDYISVTPPAKLNTAAIDTYNDHRMAMCFSMMAFADC GITINEPECTSKTFPDYFNQFNALAN
Sequences:
>Translated_426_residues MNQLRLEPIKKVSGTINIPGSKSISNRALLLATLASGTTTLTNLLDSDDIRYMLASLKQLGVSYRLSNNNTVCELDGLAG PLNAGEPQTLFLGNAGTAMRPLCAALTLGQGQFTLTGEPRMEERPIGDLVDALRQLGAEVSYLKNEGFPPLNITSTGLNG GNVEIAGDLSSQFLTALLMVAPLAKGDVNIKIKGELVSKPYIDITLALMAQFGVEVQNNDYASFVIKAGQRYVSPGKVLV EGDASSASYFLAAGAIQGGEVKVTGVGKLSIQGDVKFADVLEQMGADIEWGDDYIIARQAKLKAVDLDMNHIPDAAMTIA TAALFATGTTRIRNIYNWRIKETDRLAAMATELRKVGAIVDEGHDYISVTPPAKLNTAAIDTYNDHRMAMCFSMMAFADC GITINEPECTSKTFPDYFNQFNALAN >Mature_426_residues MNQLRLEPIKKVSGTINIPGSKSISNRALLLATLASGTTTLTNLLDSDDIRYMLASLKQLGVSYRLSNNNTVCELDGLAG PLNAGEPQTLFLGNAGTAMRPLCAALTLGQGQFTLTGEPRMEERPIGDLVDALRQLGAEVSYLKNEGFPPLNITSTGLNG GNVEIAGDLSSQFLTALLMVAPLAKGDVNIKIKGELVSKPYIDITLALMAQFGVEVQNNDYASFVIKAGQRYVSPGKVLV EGDASSASYFLAAGAIQGGEVKVTGVGKLSIQGDVKFADVLEQMGADIEWGDDYIIARQAKLKAVDLDMNHIPDAAMTIA TAALFATGTTRIRNIYNWRIKETDRLAAMATELRKVGAIVDEGHDYISVTPPAKLNTAAIDTYNDHRMAMCFSMMAFADC GITINEPECTSKTFPDYFNQFNALAN
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=421, Percent_Identity=68.4085510688836, Blast_Score=580, Evalue=1e-167, Organism=Saccharomyces cerevisiae, GI6320332, Length=450, Percent_Identity=36.6666666666667, Blast_Score=241, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_SHEHH (B0TT43)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001674263.1 - ProteinModelPortal: B0TT43 - SMR: B0TT43 - GeneID: 5905201 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_2043 - HOGENOM: HBG646626 - OMA: GADIEWG - ProtClustDB: PRK02427 - BioCyc: SHAL458817:SHAL_2043-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 45661; Mature: 45661
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLRLEPIKKVSGTINIPGSKSISNRALLLATLASGTTTLTNLLDSDDIRYMLASLKQL CCCCCCCHHHHCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHC GVSYRLSNNNTVCELDGLAGPLNAGEPQTLFLGNAGTAMRPLCAALTLGQGQFTLTGEPR CEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCEEEECCCCC MEERPIGDLVDALRQLGAEVSYLKNEGFPPLNITSTGLNGGNVEIAGDLSSQFLTALLMV CCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHH APLAKGDVNIKIKGELVSKPYIDITLALMAQFGVEVQNNDYASFVIKAGQRYVSPGKVLV HCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCEEECCCCEEHEEECCCCCCCCCCEEE EGDASSASYFLAAGAIQGGEVKVTGVGKLSIQGDVKFADVLEQMGADIEWGDDYIIARQA ECCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECC KLKAVDLDMNHIPDAAMTIATAALFATGTTRIRNIYNWRIKETDRLAAMATELRKVGAIV EEEEEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHH DEGHDYISVTPPAKLNTAAIDTYNDHRMAMCFSMMAFADCGITINEPECTSKTFPDYFNQ CCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHH FNALAN HHHHCC >Mature Secondary Structure MNQLRLEPIKKVSGTINIPGSKSISNRALLLATLASGTTTLTNLLDSDDIRYMLASLKQL CCCCCCCHHHHCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHC GVSYRLSNNNTVCELDGLAGPLNAGEPQTLFLGNAGTAMRPLCAALTLGQGQFTLTGEPR CEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCEEEECCCCC MEERPIGDLVDALRQLGAEVSYLKNEGFPPLNITSTGLNGGNVEIAGDLSSQFLTALLMV CCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHH APLAKGDVNIKIKGELVSKPYIDITLALMAQFGVEVQNNDYASFVIKAGQRYVSPGKVLV HCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCEEECCCCEEHEEECCCCCCCCCCEEE EGDASSASYFLAAGAIQGGEVKVTGVGKLSIQGDVKFADVLEQMGADIEWGDDYIIARQA ECCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECC KLKAVDLDMNHIPDAAMTIATAALFATGTTRIRNIYNWRIKETDRLAAMATELRKVGAIV EEEEEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHH DEGHDYISVTPPAKLNTAAIDTYNDHRMAMCFSMMAFADCGITINEPECTSKTFPDYFNQ CCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHH FNALAN HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA