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The map label for this gene is yfaE [H]

Identifier: 167623960

GI number: 167623960

Start: 2452784

End: 2453167

Strand: Reverse

Name: yfaE [H]

Synonym: Shal_2034

Alternate gene names: 167623960

Gene position: 2453167-2452784 (Counterclockwise)

Preceding gene: 167623961

Following gene: 167623959

Centisome position: 46.93

GC content: 46.61

Gene sequence:

>384_bases
ATGACGATGAGTTCTCAGACTTTGACCTATAAACCACAAGACTTTAGTCAAGCAAGCTTTAAGAAGGCTCCGATTGTGAG
CCTTCAAGGCATGCCTGTGTTGCTGTTTAATCAGCAACACTTAACCCTGCTTGAGGCGCTTGAACAAAAGCGAGTAAAGA
TATTCTCAGAATGTCGCAGTGGCTATTGTGGCCAGTGCAAGACTAAAGTAAAGGCAGGTAAGGTCAGCTACTTTCGTGAG
CCGCTTGTCACATTAGAAGCCGATGAATGCCTGCCCTGCTGCTGCATTCCTGATGGGGATATCGACTTAGCGCTTTCAGC
AGAGGGTGCAGAAGTGGTTGTGCGAGTTCCCACACATCAATCAGCTACTGCTAAAGTACTTTAA

Upstream 100 bases:

>100_bases
CCATGGATGAAGAACTGGTTAGAAAGTGATTCAGTGCAAGTTGCGCCTCAAGAAGTAGAAGTCTCCTCTTACCTTGTGGG
TCAAATCGATTCATCAATCG

Downstream 100 bases:

>100_bases
GATTTTTTCCTCCTCTTAGCCCCTTCTTAACTGGTATCAAGCGACTACTTAGTCGCTGCTGACTATCTGGTATAAGGGGC
TTGATACATACTTCATTAGC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTMSSQTLTYKPQDFSQASFKKAPIVSLQGMPVLLFNQQHLTLLEALEQKRVKIFSECRSGYCGQCKTKVKAGKVSYFRE
PLVTLEADECLPCCCIPDGDIDLALSAEGAEVVVRVPTHQSATAKVL

Sequences:

>Translated_127_residues
MTMSSQTLTYKPQDFSQASFKKAPIVSLQGMPVLLFNQQHLTLLEALEQKRVKIFSECRSGYCGQCKTKVKAGKVSYFRE
PLVTLEADECLPCCCIPDGDIDLALSAEGAEVVVRVPTHQSATAKVL
>Mature_126_residues
TMSSQTLTYKPQDFSQASFKKAPIVSLQGMPVLLFNQQHLTLLEALEQKRVKIFSECRSGYCGQCKTKVKAGKVSYFREP
LVTLEADECLPCCCIPDGDIDLALSAEGAEVVVRVPTHQSATAKVL

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788568, Length=72, Percent_Identity=44.4444444444444, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 13955; Mature: 13824

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00197 2FE2S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSSQTLTYKPQDFSQASFKKAPIVSLQGMPVLLFNQQHLTLLEALEQKRVKIFSECRS
CCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GYCGQCKTKVKAGKVSYFREPLVTLEADECLPCCCIPDGDIDLALSAEGAEVVVRVPTHQ
CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCEEEECCCCCEEEEEECCCCEEEEECCCCC
SATAKVL
CCEEECC
>Mature Secondary Structure 
TMSSQTLTYKPQDFSQASFKKAPIVSLQGMPVLLFNQQHLTLLEALEQKRVKIFSECRS
CCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GYCGQCKTKVKAGKVSYFREPLVTLEADECLPCCCIPDGDIDLALSAEGAEVVVRVPTHQ
CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCEEEECCCCCEEEEEECCCCEEEEECCCCC
SATAKVL
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]