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The map label for this gene is rbsC [H]

Identifier: 167623937

GI number: 167623937

Start: 2426911

End: 2427948

Strand: Direct

Name: rbsC [H]

Synonym: Shal_2011

Alternate gene names: 167623937

Gene position: 2426911-2427948 (Clockwise)

Preceding gene: 167623936

Following gene: 167623938

Centisome position: 46.43

GC content: 47.01

Gene sequence:

>1038_bases
ATGAATACATCTGTTGCTACAGATAAAAGTTTAAGATTGCCAATAACTCGACTGAAACCCGTGTTGCATAAATATGGCAT
TGTGCTTGCCTTTCTATTTATATGCGCCACGATTGCTGTTTTAGGCGAGCTTTGTATCCATAATGGCATGTGGGACAGTA
ACTATTTTCTGACTCAAGCTAACTTACTGTCAGTGCTACGCCAAGTCTCTATTAATGGCATTTTAGCCGTAGGCATGACC
TTTGTGATTATCGTGGCTGGCGTGGATCTCTCTGTGGGTTCAGTACTGGCACTCGCTGGTATTGTTGCTGCGCGCTTTGT
TACCAACTCATCGAATATGTTGATTGGTGGTTTTGATTCGCCAATCCTTCTGCCGCTAATGGTAGCTATCTGTATCGGTG
CCATCTGCGGCTTTTTGAACGGTTACATTATCTCAAAGTTCCGCCTGCAAGCCTTTATCGTAACCATGGGAATGCTTTCT
GTTGCTCGCGGCATGACCATGCTGACGACTGACGGCAATCCAGTTTCTTCGCTTGATCGCGGGTTTCGTGCACTAGGTAA
TAGCTACACGTTCGGCATACCGACACCCGTGGTGATTTTTGCGGTTATTTTTGCCGCCGCGTGGTTCTTATTGAATAAGA
CGGTTTTTGGTCGCTATGTATTTGCTGTGGGCGGTAACGAGAAATCGGCGCAAACCTCGGGGATCGACGTACATAAGGTC
AAGGTTGCCGTTTATACCTTGTGTGGCGTGACGGCGGCCATTGCAGGTTTGATCCTTACCGCGCGCACAGGCTCTGCTCA
AACAAGCGCAGGTTTTGGCTATGAGCTCGATGCTATTGCTGCCGTTGTTATTGGTGGCACATCAATGGCAGGGGGACTTG
GAACGTTAACCGGAACCCTGTTTGGTGTATTGATTATTGGTGTAATGAACAACGGTTTAGATCTGCTCGGAGTGCAATCT
TACTATCAACAAATCATTAAAGGCTTGCTCATCGTTGCGGCGGTGATGCTAGACCCATCTAGAAAGCAATCTCGTTAA

Upstream 100 bases:

>100_bases
CCGTATTATCATTTTCAAAAATGGTGAGCTGATAAGCGAAGTAAAGCAGTCAGATGCCACCCAACAACTTTTATTAAGTC
TTGCTTCCTAGGAAAAATTT

Downstream 100 bases:

>100_bases
ACACGCTTAATTTAAAACTCTTAATTAAATAGAGTGCGTTAAAAATAAAAGAAAAAAGGTATAACTGAAATGAAAAAAAC
GATTATCTCTACATTACTTG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNTSVATDKSLRLPITRLKPVLHKYGIVLAFLFICATIAVLGELCIHNGMWDSNYFLTQANLLSVLRQVSINGILAVGMT
FVIIVAGVDLSVGSVLALAGIVAARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLS
VARGMTMLTTDGNPVSSLDRGFRALGNSYTFGIPTPVVIFAVIFAAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
KVAVYTLCGVTAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTLFGVLIIGVMNNGLDLLGVQS
YYQQIIKGLLIVAAVMLDPSRKQSR

Sequences:

>Translated_345_residues
MNTSVATDKSLRLPITRLKPVLHKYGIVLAFLFICATIAVLGELCIHNGMWDSNYFLTQANLLSVLRQVSINGILAVGMT
FVIIVAGVDLSVGSVLALAGIVAARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLS
VARGMTMLTTDGNPVSSLDRGFRALGNSYTFGIPTPVVIFAVIFAAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
KVAVYTLCGVTAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTLFGVLIIGVMNNGLDLLGVQS
YYQQIIKGLLIVAAVMLDPSRKQSR
>Mature_345_residues
MNTSVATDKSLRLPITRLKPVLHKYGIVLAFLFICATIAVLGELCIHNGMWDSNYFLTQANLLSVLRQVSINGILAVGMT
FVIIVAGVDLSVGSVLALAGIVAARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLS
VARGMTMLTTDGNPVSSLDRGFRALGNSYTFGIPTPVVIFAVIFAAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
KVAVYTLCGVTAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTLFGVLIIGVMNNGLDLLGVQS
YYQQIIKGLLIVAAVMLDPSRKQSR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=298, Percent_Identity=49.3288590604027, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1790524, Length=336, Percent_Identity=37.202380952381, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1788896, Length=284, Percent_Identity=39.0845070422535, Blast_Score=181, Evalue=6e-47,
Organism=Escherichia coli, GI145693152, Length=327, Percent_Identity=33.3333333333333, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1789992, Length=375, Percent_Identity=33.0666666666667, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1788471, Length=291, Percent_Identity=39.8625429553265, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI87082395, Length=269, Percent_Identity=36.0594795539033, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI145693214, Length=263, Percent_Identity=33.0798479087452, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1787794, Length=272, Percent_Identity=28.3088235294118, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787793, Length=290, Percent_Identity=27.9310344827586, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36204; Mature: 36204

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSVATDKSLRLPITRLKPVLHKYGIVLAFLFICATIAVLGELCIHNGMWDSNYFLTQA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
NLLSVLRQVSINGILAVGMTFVIIVAGVDLSVGSVLALAGIVAARFVTNSSNMLIGGFDS
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC
PILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLSVARGMTMLTTDGNPVSSLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
GFRALGNSYTFGIPTPVVIFAVIFAAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHH
KVAVYTLCGVTAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTL
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
FGVLIIGVMNNGLDLLGVQSYYQQIIKGLLIVAAVMLDPSRKQSR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNTSVATDKSLRLPITRLKPVLHKYGIVLAFLFICATIAVLGELCIHNGMWDSNYFLTQA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
NLLSVLRQVSINGILAVGMTFVIIVAGVDLSVGSVLALAGIVAARFVTNSSNMLIGGFDS
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC
PILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLSVARGMTMLTTDGNPVSSLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
GFRALGNSYTFGIPTPVVIFAVIFAAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHH
KVAVYTLCGVTAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTL
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
FGVLIIGVMNNGLDLLGVQSYYQQIIKGLLIVAAVMLDPSRKQSR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]