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The map label for this gene is ychJ [C]

Identifier: 167623871

GI number: 167623871

Start: 2334461

End: 2334940

Strand: Reverse

Name: ychJ [C]

Synonym: Shal_1941

Alternate gene names: 167623871

Gene position: 2334940-2334461 (Counterclockwise)

Preceding gene: 167623872

Following gene: 167623867

Centisome position: 44.67

GC content: 40.83

Gene sequence:

>480_bases
ATGACAAACCTTAATTTTGCAGCCGAAAGCCTTTGCCCCTGTTGTTCTGGGGCGACTTATCAAGATTGTTGCCAGCCACT
TCACCTAAAAATTCAAATTGCACTTACCCCCGAGCAATTAATGCGTTCTCGATTTAGTGCTTTTTATCTAGAACGATATG
ATTATTTGATTGAAACCCACCATCTTGATTATTTAAATGGGTTGACAGCGCAAAATCTTGCGCAAGAGCCATTACCTCAG
TGGTTAGGGTTAGAAGTTTGCTCAAGTCATCAGGACGGTAATGAGGGAAGTGTAACCTTTCAGGCTTGGTATCAATTAGA
TAATGAGCTAGATGCCATTCATGAATGCTCAGATTTTATCAAGCAGGATGAAAAGTGGTATTACACTCAAGGTGAGCAAA
AAGCTGCGGTCTTTCCTAAGCGAAATGATAAGTGTATCTGCCACAGTGGTAAGAAATTTAAGCAGTGCTGCGGTAAGTAA

Upstream 100 bases:

>100_bases
ATTTTATTATAATGCTAAACCAAGCCCAAACCTTTATTATGGTCGCCAATTTCCTGCACTGAGCCAAAACTCACCTTCCA
ACAATCAATAATAAGTTACC

Downstream 100 bases:

>100_bases
CCCACTCTTAATGAATTGAGGCTGATTTTTCTAAGAATTGGCCAAATTCAGAGACTCTTAACGCTGGGCTGTATAAGAAG
CCCTGCGCTTGGTGACACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTNLNFAAESLCPCCSGATYQDCCQPLHLKIQIALTPEQLMRSRFSAFYLERYDYLIETHHLDYLNGLTAQNLAQEPLPQ
WLGLEVCSSHQDGNEGSVTFQAWYQLDNELDAIHECSDFIKQDEKWYYTQGEQKAAVFPKRNDKCICHSGKKFKQCCGK

Sequences:

>Translated_159_residues
MTNLNFAAESLCPCCSGATYQDCCQPLHLKIQIALTPEQLMRSRFSAFYLERYDYLIETHHLDYLNGLTAQNLAQEPLPQ
WLGLEVCSSHQDGNEGSVTFQAWYQLDNELDAIHECSDFIKQDEKWYYTQGEQKAAVFPKRNDKCICHSGKKFKQCCGK
>Mature_158_residues
TNLNFAAESLCPCCSGATYQDCCQPLHLKIQIALTPEQLMRSRFSAFYLERYDYLIETHHLDYLNGLTAQNLAQEPLPQW
LGLEVCSSHQDGNEGSVTFQAWYQLDNELDAIHECSDFIKQDEKWYYTQGEQKAAVFPKRNDKCICHSGKKFKQCCGK

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=153, Percent_Identity=41.8300653594771, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18300; Mature: 18169

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLNFAAESLCPCCSGATYQDCCQPLHLKIQIALTPEQLMRSRFSAFYLERYDYLIETH
CCCCCCCHHHHCCCCCCCCHHHHCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
HLDYLNGLTAQNLAQEPLPQWLGLEVCSSHQDGNEGSVTFQAWYQLDNELDAIHECSDFI
HHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHH
KQDEKWYYTQGEQKAAVFPKRNDKCICHSGKKFKQCCGK
HCCCCEEEECCCCCEECCCCCCCEEEECCCHHHHHHHCC
>Mature Secondary Structure 
TNLNFAAESLCPCCSGATYQDCCQPLHLKIQIALTPEQLMRSRFSAFYLERYDYLIETH
CCCCCCHHHHCCCCCCCCHHHHCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
HLDYLNGLTAQNLAQEPLPQWLGLEVCSSHQDGNEGSVTFQAWYQLDNELDAIHECSDFI
HHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHH
KQDEKWYYTQGEQKAAVFPKRNDKCICHSGKKFKQCCGK
HCCCCEEEECCCCCEECCCCCCCEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]