| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yfiP [C]
Identifier: 167623827
GI number: 167623827
Start: 2279943
End: 2280359
Strand: Direct
Name: yfiP [C]
Synonym: Shal_1897
Alternate gene names: 167623827
Gene position: 2279943-2280359 (Clockwise)
Preceding gene: 167623826
Following gene: 167623829
Centisome position: 43.62
GC content: 45.56
Gene sequence:
>417_bases ATGTGGTCACGGGTGACACCATCTGAGTTACTGCTCGCCAAGCTCGGTGAGAGCGACACTGCACTATTGTTCCCCAAAGA GCTTCCCAACGAGGAGGCTGTACAGAAAACTGAGTGCAGCACTGAATGTGGCAGTGACTATAATGGTGATTTAGCACAAG ACTCGCTGCCTAAAACGTTAATTATTTTAGATGCGACTTGGCAAGAAGCGCGCAAGATGTTGCGTCAAAGCCCTTATCTA AAAACGGCTAAGACGTTCGCTTTAACAGATACTCCTGATTCACAGTTTACTCTTAGGCGTAATCAGGTTGAGGGTGGCTT GTGCACACTCGAGTGTATTATTGAGCTATTTAAACAAGCTGGAATGCATGCTGAGGCGCAGGTATTAACTAGCGAGTTTA ATGATTTTTGCCACTAA
Upstream 100 bases:
>100_bases ATTGCAGGTAATATTACTAACCCACGAGCGAGAAGCCAGCCGTCCTACCAATACGGGCAGCATTGCACTTAAACTGTTTC CAGAGTATTGCCAGCGGATA
Downstream 100 bases:
>100_bases TACTCATTATATCGCCTCGTGGTTTATAGTTTTTAAAACAAAGAACCCAGCTTAGGCTGGGTTCTTTACTTATTAATCAG ATTTTGGCTTAACTTAACGG
Product: DTW domain-containing protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; Cytoplasmic Protein; DTW Protein; DTW Domain Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MWSRVTPSELLLAKLGESDTALLFPKELPNEEAVQKTECSTECGSDYNGDLAQDSLPKTLIILDATWQEARKMLRQSPYL KTAKTFALTDTPDSQFTLRRNQVEGGLCTLECIIELFKQAGMHAEAQVLTSEFNDFCH
Sequences:
>Translated_138_residues MWSRVTPSELLLAKLGESDTALLFPKELPNEEAVQKTECSTECGSDYNGDLAQDSLPKTLIILDATWQEARKMLRQSPYL KTAKTFALTDTPDSQFTLRRNQVEGGLCTLECIIELFKQAGMHAEAQVLTSEFNDFCH >Mature_138_residues MWSRVTPSELLLAKLGESDTALLFPKELPNEEAVQKTECSTECGSDYNGDLAQDSLPKTLIILDATWQEARKMLRQSPYL KTAKTFALTDTPDSQFTLRRNQVEGGLCTLECIIELFKQAGMHAEAQVLTSEFNDFCH
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082133, Length=137, Percent_Identity=32.8467153284672, Blast_Score=65, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15475; Mature: 15475
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSRVTPSELLLAKLGESDTALLFPKELPNEEAVQKTECSTECGSDYNGDLAQDSLPKTL CCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCEE IILDATWQEARKMLRQSPYLKTAKTFALTDTPDSQFTLRRNQVEGGLCTLECIIELFKQA EEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHC GMHAEAQVLTSEFNDFCH CCCHHHHHHHHHHHHHCC >Mature Secondary Structure MWSRVTPSELLLAKLGESDTALLFPKELPNEEAVQKTECSTECGSDYNGDLAQDSLPKTL CCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCEE IILDATWQEARKMLRQSPYLKTAKTFALTDTPDSQFTLRRNQVEGGLCTLECIIELFKQA EEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHC GMHAEAQVLTSEFNDFCH CCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA