Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623728

Identifier: 167623728

GI number: 167623728

Start: 2150982

End: 2151224

Strand: Reverse

Name: 167623728

Synonym: Shal_1798

Alternate gene names: NA

Gene position: 2151224-2150982 (Counterclockwise)

Preceding gene: 167623729

Following gene: 167623725

Centisome position: 41.16

GC content: 40.33

Gene sequence:

>243_bases
TTGTATTCAAATATTGCGTACCCCGTTACTAATCAACAAGAGTCTTACCGTTTTTTTAATTTAAGCCGCAGTGATGATGT
TAGTCGGTTGAAAATCAATTTTCCCTGCTCGACAGATGCTTATACCAATCAGTATAAAGAATTGGTCGCTCAGCGAGAGT
TTAGCGGTTATGAGGCAAGGCAACGAGTGAAGAGCATAGTTGTTCTACGGTTAAGCTCGTTAACACAGCATCAGAATCGC
TAA

Upstream 100 bases:

>100_bases
TGCATTAGGCGCCGTTTTTTTATAGGCTCTTTTGCATAGGGCTCTTTTTATAGCACCTTTGTTATTGCCATTTTTCTTTC
ATCCGTCCGCATCACTTCTG

Downstream 100 bases:

>100_bases
AACTCGCCATTCTGGAGCGTTTTTGGCTGCCTACTTCTGCGTTGAACGGCTTCACAAGGGAACAACCATTCTTTCAGCTA
TTCGCCTTGAATTAGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEARQRVKSIVVLRLSSLTQHQNR

Sequences:

>Translated_80_residues
MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEARQRVKSIVVLRLSSLTQHQNR
>Mature_80_residues
MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEARQRVKSIVVLRLSSLTQHQNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9459; Mature: 9459

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEAR
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH
QRVKSIVVLRLSSLTQHQNR
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEAR
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH
QRVKSIVVLRLSSLTQHQNR
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA