| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is 167623690
Identifier: 167623690
GI number: 167623690
Start: 2109530
End: 2109820
Strand: Reverse
Name: 167623690
Synonym: Shal_1760
Alternate gene names: NA
Gene position: 2109820-2109530 (Counterclockwise)
Preceding gene: 167623693
Following gene: 167623689
Centisome position: 40.36
GC content: 38.49
Gene sequence:
>291_bases ATGAACAAGCTAAAGCCGACAACAGAAGAGTTAGATAACGAAGACATTAATTTGGACGAAAGCTGCCAAATTCTGACGCA GAAGAAAAAGAAGTTAAATAATGCTCTGACTGTTCTTTCTAACCTCATCGAGCAACTACAAACTGAAGAAGATTCGGACG AATTGGATTTTTATGAAGAGTACCAAAAACTCTACTTCGACGTTCAAAAAGGAATTTGGGCTGAGATTGATGACCCATTA GAAAGTCACATCCTCATCCACTTCGTGAGCACTTATATCGACCACATGTAA
Upstream 100 bases:
>100_bases ACTCAAAAGTACATAGTTTGCCATCCTCGAAACTACCTATTCATTGTTACAAACAAGTGAGTCAATCGACTCTCATTTAC TTAGTCAAATGGAGTAAACA
Downstream 100 bases:
>100_bases TGAGCTCTAATATGCAGTGAAAATATTTTCATTATTTTACCGCCAACTCACCAAAACTCGCATTTCTACTTCTTACCTAG TTGTTGAACAATAAAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEEYQKLYFDVQKGIWAEIDDPL ESHILIHFVSTYIDHM
Sequences:
>Translated_96_residues MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEEYQKLYFDVQKGIWAEIDDPL ESHILIHFVSTYIDHM >Mature_96_residues MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEEYQKLYFDVQKGIWAEIDDPL ESHILIHFVSTYIDHM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11364; Mature: 11364
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEE CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YQKLYFDVQKGIWAEIDDPLESHILIHFVSTYIDHM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEE CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YQKLYFDVQKGIWAEIDDPLESHILIHFVSTYIDHM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA