Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623690

Identifier: 167623690

GI number: 167623690

Start: 2109530

End: 2109820

Strand: Reverse

Name: 167623690

Synonym: Shal_1760

Alternate gene names: NA

Gene position: 2109820-2109530 (Counterclockwise)

Preceding gene: 167623693

Following gene: 167623689

Centisome position: 40.36

GC content: 38.49

Gene sequence:

>291_bases
ATGAACAAGCTAAAGCCGACAACAGAAGAGTTAGATAACGAAGACATTAATTTGGACGAAAGCTGCCAAATTCTGACGCA
GAAGAAAAAGAAGTTAAATAATGCTCTGACTGTTCTTTCTAACCTCATCGAGCAACTACAAACTGAAGAAGATTCGGACG
AATTGGATTTTTATGAAGAGTACCAAAAACTCTACTTCGACGTTCAAAAAGGAATTTGGGCTGAGATTGATGACCCATTA
GAAAGTCACATCCTCATCCACTTCGTGAGCACTTATATCGACCACATGTAA

Upstream 100 bases:

>100_bases
ACTCAAAAGTACATAGTTTGCCATCCTCGAAACTACCTATTCATTGTTACAAACAAGTGAGTCAATCGACTCTCATTTAC
TTAGTCAAATGGAGTAAACA

Downstream 100 bases:

>100_bases
TGAGCTCTAATATGCAGTGAAAATATTTTCATTATTTTACCGCCAACTCACCAAAACTCGCATTTCTACTTCTTACCTAG
TTGTTGAACAATAAAGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEEYQKLYFDVQKGIWAEIDDPL
ESHILIHFVSTYIDHM

Sequences:

>Translated_96_residues
MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEEYQKLYFDVQKGIWAEIDDPL
ESHILIHFVSTYIDHM
>Mature_96_residues
MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEEYQKLYFDVQKGIWAEIDDPL
ESHILIHFVSTYIDHM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11364; Mature: 11364

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEE
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
YQKLYFDVQKGIWAEIDDPLESHILIHFVSTYIDHM
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKLKPTTEELDNEDINLDESCQILTQKKKKLNNALTVLSNLIEQLQTEEDSDELDFYEE
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
YQKLYFDVQKGIWAEIDDPLESHILIHFVSTYIDHM
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA