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The map label for this gene is ldh [H]

Identifier: 167623642

GI number: 167623642

Start: 2054437

End: 2055468

Strand: Reverse

Name: ldh [H]

Synonym: Shal_1711

Alternate gene names: 167623642

Gene position: 2055468-2054437 (Counterclockwise)

Preceding gene: 167623644

Following gene: 167623641

Centisome position: 39.32

GC content: 46.03

Gene sequence:

>1032_bases
GTGGCAGTTTTTAATCACATCTCTTTCGACGACCATGAACAGGTCGTATTTTGTCATGATAAAGAAAGCGGCTTAAAAGC
CATAATCGCCATCCACAATACTAATCTAGGCCCAGCCGTTGGTGGCTGCAGAATGTGGAACTATGAGTCTGATGACGAAG
CCATCACTGACGTATTACGCCTATCACGCGGCATGACTTATAAGAATGCATTGGCAGGTTTAGCAATGGGAGGCGGTAAG
TCTGTCATCATCGCCGATCCTAAGGTACAAGATAGAGAGGCACTGTTTAGAGCATTCGGTCGTTGCATTCATACCTTAGG
TGGTAAATACTTCTCAGCCGAAGATGTGGGCGTATCAACTGCCGACATTATGATTGCCCATCAAGAAACCCCATATATGG
CAGGCCTAGAAGGTAAGAGTGGCGATCCATCTCCATATACAGCTTTAGGTACCTATTTAGGAATTAAGGCTGCGGTTAAG
CACCAGCTTGGCTTAGACAGTCTAAAAGGGCTAAAGATCTCTGTACAAGGTGTTGGGCACGTTGGTTATTACCTTTGTCG
TCACTTGCATGAAGAGGGAGCTGAGCTGATCGTTACCGATATTCACCAAGCTTCATTAGACAGAGTTGCCACTGAGTTCG
GTGCTACGGTTGTCGCACCTCAAGATATTTACCATCAAGATGTAGACATCTATGCCCCCTGTGCTTTAGGTGCAACGGTT
AATGACATCACGATCCCACTGCTTAAGGCCAAAATTGTTGCTGGCTGTGCCAACAACCAGCTTGCTGAAGTACGTCATGG
CGAGATGCTAAAAGAGCTTGGCATCTTATACGCGCCAGATTATGTAATAAACGCTGGCGGGATCATCAACGTTTCTTTCG
AGAAAGATTACGATGCAACCGCTGCGACTGCAAAAGTTGAAGAGATCTACAATACCCTACTGACGATTTTCGCTCAGTCT
GATGAGCAAAACCGCACCACTGGTGATGTTGCAGACGAAATGGCAAGAGCCATTATTAACGCTGCAAAATAG

Upstream 100 bases:

>100_bases
AGTATCCCTAAATGCTATCGTTCTGCAATAAATATAACAAGTAGGCTACCCTGTAATTACACAGCGGCGGTCATTCGAAG
CTCACAGCGGAGATCAACAA

Downstream 100 bases:

>100_bases
ACAGGCTAACCATAAAAAATACCCAGCTTATATTGCTGGGTATTTTTTTGCCCACAATTGCTAAGCTCAACAAATAGATA
ACAAACTGAATTAAGCAATC

Product: Glu/Leu/Phe/Val dehydrogenase dimerisation region

Products: NA

Alternate protein names: LeuDH [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MAVFNHISFDDHEQVVFCHDKESGLKAIIAIHNTNLGPAVGGCRMWNYESDDEAITDVLRLSRGMTYKNALAGLAMGGGK
SVIIADPKVQDREALFRAFGRCIHTLGGKYFSAEDVGVSTADIMIAHQETPYMAGLEGKSGDPSPYTALGTYLGIKAAVK
HQLGLDSLKGLKISVQGVGHVGYYLCRHLHEEGAELIVTDIHQASLDRVATEFGATVVAPQDIYHQDVDIYAPCALGATV
NDITIPLLKAKIVAGCANNQLAEVRHGEMLKELGILYAPDYVINAGGIINVSFEKDYDATAATAKVEEIYNTLLTIFAQS
DEQNRTTGDVADEMARAIINAAK

Sequences:

>Translated_343_residues
MAVFNHISFDDHEQVVFCHDKESGLKAIIAIHNTNLGPAVGGCRMWNYESDDEAITDVLRLSRGMTYKNALAGLAMGGGK
SVIIADPKVQDREALFRAFGRCIHTLGGKYFSAEDVGVSTADIMIAHQETPYMAGLEGKSGDPSPYTALGTYLGIKAAVK
HQLGLDSLKGLKISVQGVGHVGYYLCRHLHEEGAELIVTDIHQASLDRVATEFGATVVAPQDIYHQDVDIYAPCALGATV
NDITIPLLKAKIVAGCANNQLAEVRHGEMLKELGILYAPDYVINAGGIINVSFEKDYDATAATAKVEEIYNTLLTIFAQS
DEQNRTTGDVADEMARAIINAAK
>Mature_342_residues
AVFNHISFDDHEQVVFCHDKESGLKAIIAIHNTNLGPAVGGCRMWNYESDDEAITDVLRLSRGMTYKNALAGLAMGGGKS
VIIADPKVQDREALFRAFGRCIHTLGGKYFSAEDVGVSTADIMIAHQETPYMAGLEGKSGDPSPYTALGTYLGIKAAVKH
QLGLDSLKGLKISVQGVGHVGYYLCRHLHEEGAELIVTDIHQASLDRVATEFGATVVAPQDIYHQDVDIYAPCALGATVN
DITIPLLKAKIVAGCANNQLAEVRHGEMLKELGILYAPDYVINAGGIINVSFEKDYDATAATAKVEEIYNTLLTIFAQSD
EQNRTTGDVADEMARAIINAAK

Specific function: Functions catabolically in the bacterial metabolism of branched-chain L-amino acids, and plays an important role in spore germination in cooperation with alanine dehydrogenase [H]

COG id: COG0334

COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]

Homologues:

Organism=Homo sapiens, GI31377775, Length=310, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI4885281, Length=310, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 9362 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006095
- InterPro:   IPR006096
- InterPro:   IPR006097
- InterPro:   IPR016211
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]

EC number: =1.4.1.9 [H]

Molecular weight: Translated: 36926; Mature: 36795

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00074 GLFV_DEHYDROGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFNHISFDDHEQVVFCHDKESGLKAIIAIHNTNLGPAVGGCRMWNYESDDEAITDVLR
CCEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHH
LSRGMTYKNALAGLAMGGGKSVIIADPKVQDREALFRAFGRCIHTLGGKYFSAEDVGVST
HHCCCCHHHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCE
ADIMIAHQETPYMAGLEGKSGDPSPYTALGTYLGIKAAVKHQLGLDSLKGLKISVQGVGH
EEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCH
VGYYLCRHLHEEGAELIVTDIHQASLDRVATEFGATVVAPQDIYHQDVDIYAPCALGATV
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCEEECCHHHHHCCCCEEECEECCCCC
NDITIPLLKAKIVAGCANNQLAEVRHGEMLKELGILYAPDYVINAGGIINVSFEKDYDAT
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCEEEECCCEEEEEECCCCCCH
AATAKVEEIYNTLLTIFAQSDEQNRTTGDVADEMARAIINAAK
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVFNHISFDDHEQVVFCHDKESGLKAIIAIHNTNLGPAVGGCRMWNYESDDEAITDVLR
CEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHH
LSRGMTYKNALAGLAMGGGKSVIIADPKVQDREALFRAFGRCIHTLGGKYFSAEDVGVST
HHCCCCHHHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCE
ADIMIAHQETPYMAGLEGKSGDPSPYTALGTYLGIKAAVKHQLGLDSLKGLKISVQGVGH
EEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCH
VGYYLCRHLHEEGAELIVTDIHQASLDRVATEFGATVVAPQDIYHQDVDIYAPCALGATV
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCEEECCHHHHHCCCCEEECEECCCCC
NDITIPLLKAKIVAGCANNQLAEVRHGEMLKELGILYAPDYVINAGGIINVSFEKDYDAT
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCEEEECCCEEEEEECCCCCCH
AATAKVEEIYNTLLTIFAQSDEQNRTTGDVADEMARAIINAAK
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3069133; 1400267 [H]