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The map label for this gene is 167623613

Identifier: 167623613

GI number: 167623613

Start: 2016661

End: 2017980

Strand: Reverse

Name: 167623613

Synonym: Shal_1682

Alternate gene names: NA

Gene position: 2017980-2016661 (Counterclockwise)

Preceding gene: 167623615

Following gene: 167623611

Centisome position: 38.61

GC content: 45.45

Gene sequence:

>1320_bases
ATGAATGCTGTTGTCATATCCGTTTGCCTGATGCTTGGCTTAAGCCTTGCGCGAGTTAACGTTGTTATCGCACTTACAAT
TAGTGCATTGGTTGCAGGTCTTGTCGGCGGCATGAGCTTGCAAAATACTGTTGACGCCTTTAATACAGGGCTTGGTGGCG
GCGCACAAATTGCGTTAAGTTATGCTTTGCTTGGTGCGTTTGCAGTTGCCTTGTCCCACTCAGGCCTAACAACATTGATC
TCACAGAAAGTAATCAAGTCTCTTGGTAAAGAGCAGTCTCCTAGCAACTTAAACCGAGTGCGCTGGATGCTATTACTTTC
AATTTTGGCGATGGCAGTCTCTTCTCAAAACGTGCTACCTATTCATATCGCGTTTATCCCCATTTTAATCCCGCCACTAC
TGCATGTGATGTCTAAACTGCATCTAGACCGACGGTTAGTGGCCTGTGTGCTTACATTTGGTTTAGTTACAACTTATATG
ATCCTACCTGTCGGCTTTGGCGGTATTTTCCTAAATGATATTTTGTTAGCAAACCTTAATAGTAACGGTCTGAATGCGAA
CCTAGCGCAGATCCCTCCTGCGATGCTGCTACCGGCTTTGGGGATGATTACAGGTCTGCTTTTCGCGGTATTTGTCACTT
ACCGCAAACCACGAGAGTATAAAGAAGAGTTAATCCTGCAAGCGGAGCCTGAAGAAGGGCTCAACAAGCGTAATATCGTT
ATCGCTGTCATTGCAGTGCTTTCAACCTTAGCGACGCAGCTTTTTACTGGCTCGATGATCTTTGGTGCATTAATTGGTTT
TATTATCTTTAGCTTCTCTGGTGCGCTAAAGCATGTCGCCGATCAGGATGTATTTAACCAAGGCGTGCGCATGATGGCTA
ATATCGGTTTTATCATGATCTCAGCAGCCGGCTTTGCTGCCGTGGTAAAAGAAACTGGTGACGTGATGAACTTAGTTACT
TCCCTAAGCGATATTATTGGAGATAATAAAGCGCTTGCGGCCTTCTTGATGCTGATTGTTGGACTGTTAATCACCATGGG
AATTGGATCATCATTTTCAACAATTCCAATTATTGCCACTATCTATGTGCCATTAGCACTGAGTTTTGGCTTCTCTGTAC
CAGCCACAATAGCATTAGTGGGCACAGCTGCAGCATTAGGTGATGCGGGCTCGCCAGCATCAGACTCAACTTTAGGTCCA
ACCGCGGGTCTTAATGCCGATGGTCAGCATGACCATATGAAAGACAGCGTTATCCCAACCTTTATCCACTACAACATTCC
ACTGCTGGTATTTGGCTGGGCTGCAGCCATGGTGCTTTAA

Upstream 100 bases:

>100_bases
CAATTGAATTCAAGATATCATGCTTGGATGCTGGACATCTTGCAGGTTAACAGGCAAAAATGGTCGCAACTTCAAATATA
AGAAATAGATTAATCATATT

Downstream 100 bases:

>100_bases
GTTCTTAACTAGAAGTTCTTAACTAGTTTCTAGGCTAAGCGCTAGGAAAGATGAAAACAAAAAAAAGGAGCCATTTGGCT
CCTTTTTTTACAATACGATT

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNAVVISVCLMLGLSLARVNVVIALTISALVAGLVGGMSLQNTVDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTTLI
SQKVIKSLGKEQSPSNLNRVRWMLLLSILAMAVSSQNVLPIHIAFIPILIPPLLHVMSKLHLDRRLVACVLTFGLVTTYM
ILPVGFGGIFLNDILLANLNSNGLNANLAQIPPAMLLPALGMITGLLFAVFVTYRKPREYKEELILQAEPEEGLNKRNIV
IAVIAVLSTLATQLFTGSMIFGALIGFIIFSFSGALKHVADQDVFNQGVRMMANIGFIMISAAGFAAVVKETGDVMNLVT
SLSDIIGDNKALAAFLMLIVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGP
TAGLNADGQHDHMKDSVIPTFIHYNIPLLVFGWAAAMVL

Sequences:

>Translated_439_residues
MNAVVISVCLMLGLSLARVNVVIALTISALVAGLVGGMSLQNTVDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTTLI
SQKVIKSLGKEQSPSNLNRVRWMLLLSILAMAVSSQNVLPIHIAFIPILIPPLLHVMSKLHLDRRLVACVLTFGLVTTYM
ILPVGFGGIFLNDILLANLNSNGLNANLAQIPPAMLLPALGMITGLLFAVFVTYRKPREYKEELILQAEPEEGLNKRNIV
IAVIAVLSTLATQLFTGSMIFGALIGFIIFSFSGALKHVADQDVFNQGVRMMANIGFIMISAAGFAAVVKETGDVMNLVT
SLSDIIGDNKALAAFLMLIVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGP
TAGLNADGQHDHMKDSVIPTFIHYNIPLLVFGWAAAMVL
>Mature_439_residues
MNAVVISVCLMLGLSLARVNVVIALTISALVAGLVGGMSLQNTVDAFNTGLGGGAQIALSYALLGAFAVALSHSGLTTLI
SQKVIKSLGKEQSPSNLNRVRWMLLLSILAMAVSSQNVLPIHIAFIPILIPPLLHVMSKLHLDRRLVACVLTFGLVTTYM
ILPVGFGGIFLNDILLANLNSNGLNANLAQIPPAMLLPALGMITGLLFAVFVTYRKPREYKEELILQAEPEEGLNKRNIV
IAVIAVLSTLATQLFTGSMIFGALIGFIIFSFSGALKHVADQDVFNQGVRMMANIGFIMISAAGFAAVVKETGDVMNLVT
SLSDIIGDNKALAAFLMLIVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGP
TAGLNADGQHDHMKDSVIPTFIHYNIPLLVFGWAAAMVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 46008; Mature: 46008

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVVISVCLMLGLSLARVNVVIALTISALVAGLVGGMSLQNTVDAFNTGLGGGAQIALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH
YALLGAFAVALSHSGLTTLISQKVIKSLGKEQSPSNLNRVRWMLLLSILAMAVSSQNVLP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
IHIAFIPILIPPLLHVMSKLHLDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLANLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
SNGLNANLAQIPPAMLLPALGMITGLLFAVFVTYRKPREYKEELILQAEPEEGLNKRNIV
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCCHHH
IAVIAVLSTLATQLFTGSMIFGALIGFIIFSFSGALKHVADQDVFNQGVRMMANIGFIMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SAAGFAAVVKETGDVMNLVTSLSDIIGDNKALAAFLMLIVGLLITMGIGSSFSTIPIIAT
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGPTAGLNADGQHDHMKDSVIPT
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHH
FIHYNIPLLVFGWAAAMVL
HHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNAVVISVCLMLGLSLARVNVVIALTISALVAGLVGGMSLQNTVDAFNTGLGGGAQIALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH
YALLGAFAVALSHSGLTTLISQKVIKSLGKEQSPSNLNRVRWMLLLSILAMAVSSQNVLP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
IHIAFIPILIPPLLHVMSKLHLDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLANLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
SNGLNANLAQIPPAMLLPALGMITGLLFAVFVTYRKPREYKEELILQAEPEEGLNKRNIV
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCCHHH
IAVIAVLSTLATQLFTGSMIFGALIGFIIFSFSGALKHVADQDVFNQGVRMMANIGFIMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SAAGFAAVVKETGDVMNLVTSLSDIIGDNKALAAFLMLIVGLLITMGIGSSFSTIPIIAT
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGPTAGLNADGQHDHMKDSVIPT
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHH
FIHYNIPLLVFGWAAAMVL
HHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]