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The map label for this gene is nagD [H]

Identifier: 167623606

GI number: 167623606

Start: 2007153

End: 2007899

Strand: Reverse

Name: nagD [H]

Synonym: Shal_1675

Alternate gene names: 167623606

Gene position: 2007899-2007153 (Counterclockwise)

Preceding gene: 167623609

Following gene: 167623605

Centisome position: 38.41

GC content: 44.58

Gene sequence:

>747_bases
ATGAAAAATGTTATTTGCGATATCGATGGAGTTTTACTGCACAACAATCAGCTTATTCCTGGTAGTGATAAGTTTATTCA
CCGTATACTCGAACAAGGAAACCCCCTTGTTGTTTTGACCAACTATCCAGTCCAAACAGGCAAAGATCTGCAAAATAGAC
TCGGCGCTGCAGGACTCAATGTTCCTGAAGAATGCTTTTATACCGCGGCTATGGCAACGGCTGACTTTCTTAAACATCAA
CAAGGGACTAAGGCCTTTGTGATTGGCGAAGGCGCATTAACTCACGAGCTGTATAAAGCAGGCTTTACCATCACCGATAT
CAACCCAGACTTTGTTATTGTCGGCGAAACTCGCTCCTACAACTGGGACATGATCCATAAGGCTGCGAAATTTGTCAGTG
AAGGTGCACGCTTTATTGCCACCAACCCCGATACCCATGGCCCATCTTTCAGCCCTGCTTGTGGGGCATTATGTGCGCCT
ATTGAACGCATCAGCGGGAAAAAGCCTTTCTATGTGGGTAAACCTAGTTCTTGGATTATTCGATCGGCACTAAACCATAT
TGGTGCCCATTCAGATAATACACTGATCATTGGTGATAACATGCGTACAGATATTCTTGCAGGCTTCCAAGCAGGACTAG
AAACCATTTTGGTAACCAGCGGTGTGAGTACGCTTGCCGATATCGAAAAGGAACCCTTTAGGCCAAATCATATTTTTAAC
TGCGCTGGCGATATCGACATCATATAA

Upstream 100 bases:

>100_bases
TTTTATCTAAATTGATACCCAAAAGCATTGTTTTTCCTCTCCATTTAGCATTAGATAAAGGTCACTTATGCGGCAAACTA
ATATGAAGTAAGAGAGTCAA

Downstream 100 bases:

>100_bases
TCCCAATAGTACTAAACATGTGATTGGTATAACTAATTACGTTTTCAAATGTAGTGGGAACCTTTAGTCTATATAGGCCT
AACGAGCTATAGAGTTTACC

Product: UMP phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKNVICDIDGVLLHNNQLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLNVPEECFYTAAMATADFLKHQ
QGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAP
IERISGKKPFYVGKPSSWIIRSALNHIGAHSDNTLIIGDNMRTDILAGFQAGLETILVTSGVSTLADIEKEPFRPNHIFN
CAGDIDII

Sequences:

>Translated_248_residues
MKNVICDIDGVLLHNNQLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLNVPEECFYTAAMATADFLKHQ
QGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAP
IERISGKKPFYVGKPSSWIIRSALNHIGAHSDNTLIIGDNMRTDILAGFQAGLETILVTSGVSTLADIEKEPFRPNHIFN
CAGDIDII
>Mature_248_residues
MKNVICDIDGVLLHNNQLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLNVPEECFYTAAMATADFLKHQ
QGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAP
IERISGKKPFYVGKPSSWIIRSALNHIGAHSDNTLIIGDNMRTDILAGFQAGLETILVTSGVSTLADIEKEPFRPNHIFN
CAGDIDII

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10092677, Length=252, Percent_Identity=26.984126984127, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI108796653, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI14149777, Length=236, Percent_Identity=23.728813559322, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1786890, Length=248, Percent_Identity=71.3709677419355, Blast_Score=387, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI17562458, Length=279, Percent_Identity=26.5232974910394, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17560956, Length=279, Percent_Identity=26.5232974910394, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17558880, Length=274, Percent_Identity=26.2773722627737, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71984613, Length=266, Percent_Identity=25.9398496240602, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562356, Length=228, Percent_Identity=25, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193210059, Length=258, Percent_Identity=24.4186046511628, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6319965, Length=233, Percent_Identity=23.6051502145923, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24666141, Length=254, Percent_Identity=29.5275590551181, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24656326, Length=254, Percent_Identity=23.6220472440945, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24656330, Length=127, Percent_Identity=33.8582677165354, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26949; Mature: 26949

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVICDIDGVLLHNNQLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLN
CCCEEECCCCEEEECCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCC
VPEECFYTAAMATADFLKHQQGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCC
NWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAPIERISGKKPFYVGKPSSWII
CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH
RSALNHIGAHSDNTLIIGDNMRTDILAGFQAGLETILVTSGVSTLADIEKEPFRPNHIFN
HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCCCCEEE
CAGDIDII
CCCCEECC
>Mature Secondary Structure
MKNVICDIDGVLLHNNQLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLN
CCCEEECCCCEEEECCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCC
VPEECFYTAAMATADFLKHQQGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCC
NWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAPIERISGKKPFYVGKPSSWII
CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH
RSALNHIGAHSDNTLIIGDNMRTDILAGFQAGLETILVTSGVSTLADIEKEPFRPNHIFN
HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCCCCEEE
CAGDIDII
CCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]