| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is trpG [H]
Identifier: 167623588
GI number: 167623588
Start: 1987706
End: 1988320
Strand: Reverse
Name: trpG [H]
Synonym: Shal_1657
Alternate gene names: 167623588
Gene position: 1988320-1987706 (Counterclockwise)
Preceding gene: 167623589
Following gene: 167623587
Centisome position: 38.04
GC content: 46.18
Gene sequence:
>615_bases ATGAAAATCTATCTGTTAGATAACTTTGACTCCTTCACTTACAACCTAGTCGATCAGTTTAGAAGTCTAGGCTACGAAGT GGTGATTTATCGTAATGATGTCGATGCTAACTTTATCGCTGACAAATTGTTAAATGAAACCGTACCCGCTGCGCTTGTGC TGTCCCCAGGTCCTGGCGCGCCCCATGAAGCGGGCTCATTAATGGCCTTGATTGAGTGCGTTGCAGGCAAAGTGCCTATG CTGGGTATTTGCCTTGGTCATCAAGCCTTAGTGGAACATTACGGCGGCAAAGTGGAACGCGCCAGACAAGTGGTTCATGG TAAGGCAAGCCCGACTTACCATAACGGTACCGATATCTTTGCAGATCTCCCCTCACCACTTCCGGTTGCTCGTTATCACA GCTTAGTCGCAACCCAAGTACCCGATTGCCTAGAGGTCATTGCGACGACTGAGGATATGCCAATGGCAATTATCCACAGA CAAGATAAAGCGGTGGGCTTTCAGTTTCATCCAGAATCAATTTTAACCACCTTAGGTAGCCAGCTATTAGTACAAAGCTT AGATTATCTTTCTCGCGCATTAGCTAATAACAGCCACGATAACGAAAAAGGATAA
Upstream 100 bases:
>100_bases GAGCCGGCGTGGTATTTGATTCAGACCCTCAGGCGGAAGCCGATGAAACCCGCCAAAAGGCACAAGCGGTTATTTCAGCC ATTAAGATGGGAGGTGGGCT
Downstream 100 bases:
>100_bases GATGATGAGTCAAACAAAAATCACTCACTCCACAATTAAATCTACTGAAGCGCTTATCGAATCCCTTTACCGCGGCGAGA GCTTATCTCGACAAGACGCT
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKIYLLDNFDSFTYNLVDQFRSLGYEVVIYRNDVDANFIADKLLNETVPAALVLSPGPGAPHEAGSLMALIECVAGKVPM LGICLGHQALVEHYGGKVERARQVVHGKASPTYHNGTDIFADLPSPLPVARYHSLVATQVPDCLEVIATTEDMPMAIIHR QDKAVGFQFHPESILTTLGSQLLVQSLDYLSRALANNSHDNEKG
Sequences:
>Translated_204_residues MKIYLLDNFDSFTYNLVDQFRSLGYEVVIYRNDVDANFIADKLLNETVPAALVLSPGPGAPHEAGSLMALIECVAGKVPM LGICLGHQALVEHYGGKVERARQVVHGKASPTYHNGTDIFADLPSPLPVARYHSLVATQVPDCLEVIATTEDMPMAIIHR QDKAVGFQFHPESILTTLGSQLLVQSLDYLSRALANNSHDNEKG >Mature_204_residues MKIYLLDNFDSFTYNLVDQFRSLGYEVVIYRNDVDANFIADKLLNETVPAALVLSPGPGAPHEAGSLMALIECVAGKVPM LGICLGHQALVEHYGGKVERARQVVHGKASPTYHNGTDIFADLPSPLPVARYHSLVATQVPDCLEVIATTEDMPMAIIHR QDKAVGFQFHPESILTTLGSQLLVQSLDYLSRALANNSHDNEKG
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=192, Percent_Identity=53.6458333333333, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=48.936170212766, Blast_Score=169, Evalue=1e-43, Organism=Escherichia coli, GI1788854, Length=191, Percent_Identity=29.3193717277487, Blast_Score=68, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6322638, Length=189, Percent_Identity=39.6825396825397, Blast_Score=142, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6324361, Length=220, Percent_Identity=28.6363636363636, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 22285; Mature: 22285
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYLLDNFDSFTYNLVDQFRSLGYEVVIYRNDVDANFIADKLLNETVPAALVLSPGPGA CEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCC PHEAGSLMALIECVAGKVPMLGICLGHQALVEHYGGKVERARQVVHGKASPTYHNGTDIF CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEE ADLPSPLPVARYHSLVATQVPDCLEVIATTEDMPMAIIHRQDKAVGFQFHPESILTTLGS ECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCEEECHHHHHHHHHH QLLVQSLDYLSRALANNSHDNEKG HHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKIYLLDNFDSFTYNLVDQFRSLGYEVVIYRNDVDANFIADKLLNETVPAALVLSPGPGA CEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCC PHEAGSLMALIECVAGKVPMLGICLGHQALVEHYGGKVERARQVVHGKASPTYHNGTDIF CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEE ADLPSPLPVARYHSLVATQVPDCLEVIATTEDMPMAIIHRQDKAVGFQFHPESILTTLGS ECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCEEECHHHHHHHHHH QLLVQSLDYLSRALANNSHDNEKG HHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]