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The map label for this gene is 167623443

Identifier: 167623443

GI number: 167623443

Start: 1821408

End: 1822709

Strand: Reverse

Name: 167623443

Synonym: Shal_1512

Alternate gene names: NA

Gene position: 1822709-1821408 (Counterclockwise)

Preceding gene: 167623444

Following gene: 167623442

Centisome position: 34.87

GC content: 46.85

Gene sequence:

>1302_bases
ATGAGTCACTACCAGAGCAGCCTTACTGTACACAAAAAGACGCACACAAAGACGTGCCAAGCAAACAACGCTCTTGGGTT
TATCAGTGGTTTGTCTTTGATCATGCTAACGGCTTGCGTTACGCCTCATCACCCTAAAGAGGCTGCTATCTGCAACGGTA
ATAGCAATGACAACATGACGCAGTGTCACTTTTATGATCGTGAAACCCCCTACATGCGCAGCAACAAGGGAACTAAAGCA
ATAACAACAACCCCAAAAATAACAGGTAACTCAATGGGCAACACCTGGTTGATGTATACAGGGCAATCTCAACAAGCACT
ACATTTACCGCAAAATATTCGCCTGTCTGTTGGTGACAGACTCAAGATTAGCGTGCTCAATGGAGAGGAGTTCAGCGGCG
ATGTTGAAGTCAATAACGATGGCTATATCTATCTACCTTATTTGGAGCCTATCCATGCAAAAGGGCTCGATATTGCACAG
CTAACACACTCAATCCAGCAATATCTAGTCGATGAACAGTTCATGCTAAAAAACAGCGTCCGCTTAAGCATTACCCCTCT
AAAATGGGCGCCAATTGAAATCACGGTATCGGGGGGAGTATTTGAACCTGGTCAGCATCAGATCAATAAGAAGTCTGATC
TTGAAATTATCGACGATGATGGCGACCACAGTGGCGATCAAGCCGATAAACGGACAATTGCGTCGGCACTAAGAGCATCG
GGCGGAGTTCGTCCCGACGCCAATATCTCGGCAATTACGGTGTTCAGAGGCCAGCATAGCTTTACCTTAGATCTATCCGG
TGTGATCCATGGATACCCCGTACCCAAGTTCACCTTGATGTCAGGAGATCATATTCATGTACCGCAACATGACTATTTTG
ATGATGTGCTCGCCCGCCCATCACAAATTACCGCGCCAGGTATTCGAGTCTTTATATCAAACCTAACGCAGCCAGCATCC
AGTAACGCACAATCAGCCGTCGACACCGACGCAACTCGGTTCCCTTACGGTACACGCCTGTTAAGTGGCGCCATCGCTGC
CAACTGTGTCGGTGGCGCACAGTCAACCAATGCTAGTCGCTATTTACTACTGATAACCAAGAACCCATTAACCGCTCAAG
TCGATGTTATAGAACGCTCAATGGATAACTTAATCAGGCATTCTTGGGAAACGGGTATGAACCCAATTTTAATGCCTGGT
GATGGCATTGCTTGTTATGATTCTCGCGTTACCAACATTCGAGAAATTGCGCGTACCATCACCGAAGTACTCGTCCCAGC
GACTCTACTAGAGTTGCTGTAA

Upstream 100 bases:

>100_bases
ACATCAGATCTTCTCTATCTATGAAGACGAAGCCGCAGCCATTGATTATATCTGTAATGAACTTGCCAACAAGCAAGCCG
CGCATTAAGAGGACACTGAG

Downstream 100 bases:

>100_bases
TAGAAGCACAACAAGGAGGTTATGATGAAAACACAACACTCCTACAGGCCTCTTTTATGGTTAAAGCACTACATTGTAAA
CGGTAGTCAGCTGTCGGTGA

Product: polysaccharide export protein

Products: NA

Alternate protein names: Cold Shock Protein; Polysaccharide Export Outer Membrane Protein; Polysaccharide Biosynthesis/Export Protein; Polysaccharide Export Periplasmic Protein

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSHYQSSLTVHKKTHTKTCQANNALGFISGLSLIMLTACVTPHHPKEAAICNGNSNDNMTQCHFYDRETPYMRSNKGTKA
ITTTPKITGNSMGNTWLMYTGQSQQALHLPQNIRLSVGDRLKISVLNGEEFSGDVEVNNDGYIYLPYLEPIHAKGLDIAQ
LTHSIQQYLVDEQFMLKNSVRLSITPLKWAPIEITVSGGVFEPGQHQINKKSDLEIIDDDGDHSGDQADKRTIASALRAS
GGVRPDANISAITVFRGQHSFTLDLSGVIHGYPVPKFTLMSGDHIHVPQHDYFDDVLARPSQITAPGIRVFISNLTQPAS
SNAQSAVDTDATRFPYGTRLLSGAIAANCVGGAQSTNASRYLLLITKNPLTAQVDVIERSMDNLIRHSWETGMNPILMPG
DGIACYDSRVTNIREIARTITEVLVPATLLELL

Sequences:

>Translated_433_residues
MSHYQSSLTVHKKTHTKTCQANNALGFISGLSLIMLTACVTPHHPKEAAICNGNSNDNMTQCHFYDRETPYMRSNKGTKA
ITTTPKITGNSMGNTWLMYTGQSQQALHLPQNIRLSVGDRLKISVLNGEEFSGDVEVNNDGYIYLPYLEPIHAKGLDIAQ
LTHSIQQYLVDEQFMLKNSVRLSITPLKWAPIEITVSGGVFEPGQHQINKKSDLEIIDDDGDHSGDQADKRTIASALRAS
GGVRPDANISAITVFRGQHSFTLDLSGVIHGYPVPKFTLMSGDHIHVPQHDYFDDVLARPSQITAPGIRVFISNLTQPAS
SNAQSAVDTDATRFPYGTRLLSGAIAANCVGGAQSTNASRYLLLITKNPLTAQVDVIERSMDNLIRHSWETGMNPILMPG
DGIACYDSRVTNIREIARTITEVLVPATLLELL
>Mature_432_residues
SHYQSSLTVHKKTHTKTCQANNALGFISGLSLIMLTACVTPHHPKEAAICNGNSNDNMTQCHFYDRETPYMRSNKGTKAI
TTTPKITGNSMGNTWLMYTGQSQQALHLPQNIRLSVGDRLKISVLNGEEFSGDVEVNNDGYIYLPYLEPIHAKGLDIAQL
THSIQQYLVDEQFMLKNSVRLSITPLKWAPIEITVSGGVFEPGQHQINKKSDLEIIDDDGDHSGDQADKRTIASALRASG
GVRPDANISAITVFRGQHSFTLDLSGVIHGYPVPKFTLMSGDHIHVPQHDYFDDVLARPSQITAPGIRVFISNLTQPASS
NAQSAVDTDATRFPYGTRLLSGAIAANCVGGAQSTNASRYLLLITKNPLTAQVDVIERSMDNLIRHSWETGMNPILMPGD
GIACYDSRVTNIREIARTITEVLVPATLLELL

Specific function: Unknown

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47422; Mature: 47291

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHYQSSLTVHKKTHTKTCQANNALGFISGLSLIMLTACVTPHHPKEAAICNGNSNDNMT
CCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEE
QCHFYDRETPYMRSNKGTKAITTTPKITGNSMGNTWLMYTGQSQQALHLPQNIRLSVGDR
EEEEECCCCCCEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCEEEECCCE
LKISVLNGEEFSGDVEVNNDGYIYLPYLEPIHAKGLDIAQLTHSIQQYLVDEQFMLKNSV
EEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCC
RLSITPLKWAPIEITVSGGVFEPGQHQINKKSDLEIIDDDGDHSGDQADKRTIASALRAS
EEEEEECEEEEEEEEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHC
GGVRPDANISAITVFRGQHSFTLDLSGVIHGYPVPKFTLMSGDHIHVPQHDYFDDVLARP
CCCCCCCCCEEEEEEECCCEEEEEECCEEECCCCCEEEEECCCEEECCCCHHHHHHHCCC
SQITAPGIRVFISNLTQPASSNAQSAVDTDATRFPYGTRLLSGAIAANCVGGAQSTNASR
CCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE
YLLLITKNPLTAQVDVIERSMDNLIRHSWETGMNPILMPGDGIACYDSRVTNIREIARTI
EEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHHHHHHHHH
TEVLVPATLLELL
HHHHHHHHHHHHC
>Mature Secondary Structure 
SHYQSSLTVHKKTHTKTCQANNALGFISGLSLIMLTACVTPHHPKEAAICNGNSNDNMT
CCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEE
QCHFYDRETPYMRSNKGTKAITTTPKITGNSMGNTWLMYTGQSQQALHLPQNIRLSVGDR
EEEEECCCCCCEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCEEEECCCE
LKISVLNGEEFSGDVEVNNDGYIYLPYLEPIHAKGLDIAQLTHSIQQYLVDEQFMLKNSV
EEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCC
RLSITPLKWAPIEITVSGGVFEPGQHQINKKSDLEIIDDDGDHSGDQADKRTIASALRAS
EEEEEECEEEEEEEEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHC
GGVRPDANISAITVFRGQHSFTLDLSGVIHGYPVPKFTLMSGDHIHVPQHDYFDDVLARP
CCCCCCCCCEEEEEEECCCEEEEEECCEEECCCCCEEEEECCCEEECCCCHHHHHHHCCC
SQITAPGIRVFISNLTQPASSNAQSAVDTDATRFPYGTRLLSGAIAANCVGGAQSTNASR
CCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE
YLLLITKNPLTAQVDVIERSMDNLIRHSWETGMNPILMPGDGIACYDSRVTNIREIARTI
EEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHHHHHHHHH
TEVLVPATLLELL
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA