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The map label for this gene is flgH [H]

Identifier: 167623364

GI number: 167623364

Start: 1729335

End: 1730009

Strand: Direct

Name: flgH [H]

Synonym: Shal_1433

Alternate gene names: 167623364

Gene position: 1729335-1730009 (Clockwise)

Preceding gene: 167623363

Following gene: 167623365

Centisome position: 33.09

GC content: 46.81

Gene sequence:

>675_bases
ATGAAGCATTTGTGGGCACTTTTGTTTATGGCGGCTCTGTCCGGTTGTAATTCGACTAACGGCAAGCCTATTGCTGACGA
TCCTTATTACGCGCCCGTTTACCCAGAGGCGCCGCCAACCAAAATCGCTGCAACAGGCTCTATGTATCAAGATAGTCAGG
CATCGAGTCTTTACTCTGATATTAAAGCGCTAAAAGTGGGTGACATCATCACCGTATATTTGATGGAGCAGACTCAGGCT
AAAAAGAGCGCTAATAACGAGATCTCAAAGGGAACAGACTTATCTTTGGACCCCATTTATGCAGGTGGTGGCAATGTCAC
TATCGGCGGTAACCCCATCGATCTGCGCTACAAAGACAGCATGAATACCAAACGTGAATCGGATGCAGATCAAAGCAACA
GCTTGTCTGGCAGTATTTCAGCAAACGTGATGCAAGTACTTAACAACGGTAATTTGGTTATTCGTGGTGAAAAATGGATA
AGCATCAACAACGGTGATGAGTTTGTTCGCATTACCGGTATTGTGCGCGCGCAAGATATTCGACCCGACAATACGATTGA
CTCACAACGAGTGGCAAATGCTCGCATTCAGTACAGCGGAACGGGGACCTTTGCCGAAGTACAAAAAGTGGGTTGGTTAG
CCTCATTCTTTATGGGCAGCTGGTGGCCGTTCTAG

Upstream 100 bases:

>100_bases
CAGCGTATTTACGAGATGAACTCAAAGGTGATCTCTGCGGTTGACCAGATGTTGTCTTACGTTAACCAGAATCTTTAAGC
ATTTTTAAGAGGCTTTGACT

Downstream 100 bases:

>100_bases
GCTCTATATTAGTGCCTATAGCTAAGGATTTAGGATGATGAAATTAAAGTTGGTATTGCTATGTGCCATGTTGGTATTGA
CCACTCCCGTACATGCACAG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKHLWALLFMAALSGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVGDIITVYLMEQTQA
KKSANNEISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWI
SINNGDEFVRITGIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF

Sequences:

>Translated_224_residues
MKHLWALLFMAALSGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVGDIITVYLMEQTQA
KKSANNEISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWI
SINNGDEFVRITGIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF
>Mature_224_residues
MKHLWALLFMAALSGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVGDIITVYLMEQTQA
KKSANNEISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWI
SINNGDEFVRITGIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=227, Percent_Identity=33.920704845815, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24401; Mature: 24401

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLWALLFMAALSGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSD
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHH
IKALKVGDIITVYLMEQTQAKKSANNEISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDS
HHHHHHCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEECCC
MNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDEFVRITGIVRAQDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCEEEEEEEEEECCC
RPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF
CCCCCCCCHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKHLWALLFMAALSGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSD
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHH
IKALKVGDIITVYLMEQTQAKKSANNEISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDS
HHHHHHCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEECCC
MNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDEFVRITGIVRAQDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCEEEEEEEEEECCC
RPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF
CCCCCCCCHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA