| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cheR1 [H]
Identifier: 167623357
GI number: 167623357
Start: 1723208
End: 1724041
Strand: Direct
Name: cheR1 [H]
Synonym: Shal_1426
Alternate gene names: 167623357
Gene position: 1723208-1724041 (Clockwise)
Preceding gene: 167623356
Following gene: 167623358
Centisome position: 32.97
GC content: 44.12
Gene sequence:
>834_bases GTGGCAAATAGATCTCTTGCTGAGAATGAGTACAATCAATTTAGATTATTCTTAGAACAACACAGTGGTATTGTGTTGGG AGAAAATAAGCAGTATTTGGTGCGTAGCCGGTTAGCGCCTCTAATGGGCAAGTACAACTTGCCGTCCTTATCAGATGTGG TTAAACATTCGATGAAACCGACAGAGCGTCAACTGCGCACTGAGGTTATCGATGCTATGACCACAAACGAAACACTATGG TTTCGCGATCGTTATCCTTTCGAGTTGTTATCGAACGCCATTTTACCCACATTTAGTCGTTTAGGCCGTCCAGTTAAGAT ATGGTCTGCTGCCTGTTCCTCAGGGCAAGAGCCCTATTCTTTAGCCATGACGATTCTAGAGCATCAGCAGCGTAAGCCTG GTAGTCTTCCCGCGAGTGCAGCGATCTTGGCAACCGATTTATCGCCATCTATGCTTGAGCGTTGTAAAGGTGCTGAATAT GATAATCTTGCATTAGGTCGAGGCTTGTCCGATGAACGCAAACGTCAGTTTTTTGATGTTTTACCCTCGGGCAACATGGT CGTTAAAGACAATGTTAAGCGATTAGTCAACTTTCGAGCGCATAACTTGCTTGAAAGTTATACCTTATTAGGCAAGTTCG ATATTATTTTTTGCCGTAATGTGTTGATCTATTTTTCACCTGAGGCAAAGCGGAAAATCCTACGGCAATTTGCTGCCGCG TTAAATCCTAACGGCATTTTGTTTTTAGGCGCATCGGAGTCTATTGCGGGTCTGTCTGACGAATTTGATATGGTGCGCTG CAATCCGGGGATCTATTATCAAAAGCGAGGCTAA
Upstream 100 bases:
>100_bases TGTTTGTGTTGATGCTAAGGTATAACGCTGCGTTCGTTTTTGCCTGTGGTCAATGTCTTTTTGGCTAATGTGGTTTGTTT TATTAAATTAGGATATTAGA
Downstream 100 bases:
>100_bases CGCTTTGTTCACTTGAGTGCTCCTCTGAAAACGCGTCGTTATGACGCGTTTTTTAAATCTAATATTCTATCCATGAATCT ATCTTAAATACGCCTCCCCA
Product: CheR-type MCP methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MANRSLAENEYNQFRLFLEQHSGIVLGENKQYLVRSRLAPLMGKYNLPSLSDVVKHSMKPTERQLRTEVIDAMTTNETLW FRDRYPFELLSNAILPTFSRLGRPVKIWSAACSSGQEPYSLAMTILEHQQRKPGSLPASAAILATDLSPSMLERCKGAEY DNLALGRGLSDERKRQFFDVLPSGNMVVKDNVKRLVNFRAHNLLESYTLLGKFDIIFCRNVLIYFSPEAKRKILRQFAAA LNPNGILFLGASESIAGLSDEFDMVRCNPGIYYQKRG
Sequences:
>Translated_277_residues MANRSLAENEYNQFRLFLEQHSGIVLGENKQYLVRSRLAPLMGKYNLPSLSDVVKHSMKPTERQLRTEVIDAMTTNETLW FRDRYPFELLSNAILPTFSRLGRPVKIWSAACSSGQEPYSLAMTILEHQQRKPGSLPASAAILATDLSPSMLERCKGAEY DNLALGRGLSDERKRQFFDVLPSGNMVVKDNVKRLVNFRAHNLLESYTLLGKFDIIFCRNVLIYFSPEAKRKILRQFAAA LNPNGILFLGASESIAGLSDEFDMVRCNPGIYYQKRG >Mature_276_residues ANRSLAENEYNQFRLFLEQHSGIVLGENKQYLVRSRLAPLMGKYNLPSLSDVVKHSMKPTERQLRTEVIDAMTTNETLWF RDRYPFELLSNAILPTFSRLGRPVKIWSAACSSGQEPYSLAMTILEHQQRKPGSLPASAAILATDLSPSMLERCKGAEYD NLALGRGLSDERKRQFFDVLPSGNMVVKDNVKRLVNFRAHNLLESYTLLGKFDIIFCRNVLIYFSPEAKRKILRQFAAAL NPNGILFLGASESIAGLSDEFDMVRCNPGIYYQKRG
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=267, Percent_Identity=31.0861423220974, Blast_Score=127, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 31404; Mature: 31272
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRSLAENEYNQFRLFLEQHSGIVLGENKQYLVRSRLAPLMGKYNLPSLSDVVKHSMKP CCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCH TERQLRTEVIDAMTTNETLWFRDRYPFELLSNAILPTFSRLGRPVKIWSAACSSGQEPYS HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHH LAMTILEHQQRKPGSLPASAAILATDLSPSMLERCKGAEYDNLALGRGLSDERKRQFFDV HHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHH LPSGNMVVKDNVKRLVNFRAHNLLESYTLLGKFDIIFCRNVLIYFSPEAKRKILRQFAAA CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHHHHHHHHH LNPNGILFLGASESIAGLSDEFDMVRCNPGIYYQKRG CCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEECC >Mature Secondary Structure ANRSLAENEYNQFRLFLEQHSGIVLGENKQYLVRSRLAPLMGKYNLPSLSDVVKHSMKP CCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCH TERQLRTEVIDAMTTNETLWFRDRYPFELLSNAILPTFSRLGRPVKIWSAACSSGQEPYS HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHH LAMTILEHQQRKPGSLPASAAILATDLSPSMLERCKGAEYDNLALGRGLSDERKRQFFDV HHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHH LPSGNMVVKDNVKRLVNFRAHNLLESYTLLGKFDIIFCRNVLIYFSPEAKRKILRQFAAA CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHHHHHHHHH LNPNGILFLGASESIAGLSDEFDMVRCNPGIYYQKRG CCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 10400589 [H]