| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623330
Identifier: 167623330
GI number: 167623330
Start: 1689813
End: 1691024
Strand: Direct
Name: 167623330
Synonym: Shal_1399
Alternate gene names: NA
Gene position: 1689813-1691024 (Clockwise)
Preceding gene: 167623329
Following gene: 167623331
Centisome position: 32.33
GC content: 44.22
Gene sequence:
>1212_bases ATGATAAAAACAAGAGTATTAGTGCAAGCCAGTTCACGCTCATGGGCTGGTGGCGTCGATATCTGCATGGGGATGGTAGA GGGCGAGATTGCCGTTGTTCGAACCATTCGCCGTGTCTTGAGCCACTTTACCGATTTAGATGTTGTCTTGGTTGCTCCGG AGTTTGATCGTGGTGGAGAGCTCGATGAGATCGTTAAGCTTATCGATGATGAACGTCTCTCTCTGTATTACGGCCACGAT GCGAGCCCGCTTAATCGAATGATAGATGCTTGTTCAGATTTAGCCGATAGCGATTATGTGATCAGAGTCGATGGCATTCA TTTTTGCTTCGACCCTCAGGCAAGTTTAGCTATGCTAGATATCGCCATCAGTGAGCAATTGGATTGTATTAAGTTACCCG ATGATTTTCCTGTGCATTTTACCTCAGAAATCTTTCGTATCGGCGCACTAAAAGCTATTAATAATGAACTCACTCAGCCT GAGGATGCCAAGTTTCTCGTGCACCCTAAGTGCTACTTTTCGATGAATGCTCAGCGATATAGAGTTAAGTTCTTAACAGA GTTACCAAGCTATGCTGATGAATACTTGACTGAGTGTCGCCACTTAGCTACACAAATTTATGCGATCCCGCGTCAAGAGG TGAATGAGCACCGTATTGTCTCTGGTGACAGATTAGGCTTTCATTACGAGCTCGCCTTACAGCATCTTAAGTCTGATATG AAGATTATCGACATCGCCTGTGCCGATGGTTACGGTGTCAACATTATGGCGAGTCATTTAAAAGAGGTTCATGGAGCCGA TTTAGATGAGCTGAGTGTGGAATTTGCGAAGAAAAATAACAGCGCTGCCAATACCGATTACTTTGTCGAAGACATCACAA AGTTGTCTTTTGCCGATGAGTCCTACGACGCTGTAACCAGCTTTGAAACCCTTGAGCATGTACCAGAGCATGAGTGCTTA AGTGAAATCAAACGCGTGCTGAAACCTGGCGGTGTCTTAGTGTTAAGTACCCCTCAAAATAGCATAGGCCATATCCCTGT TAACTCTTGTCACCTTATTGAATATTCTCTCGATGAGCTGCTGGCACTCGTTAACCAGTATTTTATTGTCGTCAAAGTGA TCGGTATCAAAGCGGGCATTATTTATGACGAAACAGACCCTTATGGCACCAATACTGTGCTTATCTGCGTAAAGCCTAAT AGTAAGGATTGA
Upstream 100 bases:
>100_bases TATCAATCCATGGCTGAAATCGGTGTCGGCAGAGAGATCTGCATCTACGCCCGTAAGCGCAGTAGTTAATGCAAAATGAA GCCGCTTAATAGGAATTAAC
Downstream 100 bases:
>100_bases TAATGAAAACCCATCAATTAATTGTGCCGACTCTCAATGAACTGAAACAGCAGTCGGCGGCGCAATTAACCCAATTAGCC GAAGATATTAGGCAGTTTCT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Methyltransferase And Glycosyltransferase; Glycosyl Transferase Family Protein; Methyltransferase Domain Protein; Glycosyl Transferase
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGELDEIVKLIDDERLSLYYGHD ASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLDIAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQP EDAKFLVHPKCYFSMNAQRYRVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADESYDAVTSFETLEHVPEHECL SEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDELLALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPN SKD
Sequences:
>Translated_403_residues MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGELDEIVKLIDDERLSLYYGHD ASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLDIAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQP EDAKFLVHPKCYFSMNAQRYRVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADESYDAVTSFETLEHVPEHECL SEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDELLALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPN SKD >Mature_403_residues MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGELDEIVKLIDDERLSLYYGHD ASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLDIAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQP EDAKFLVHPKCYFSMNAQRYRVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADESYDAVTSFETLEHVPEHECL SEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDELLALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPN SKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45194; Mature: 45194
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGE CCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC LDEIVKLIDDERLSLYYGHDASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLD HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEE IAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQPEDAKFLVHPKCYFSMNAQRY EHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCE RVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM EEHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCHHHHHHHHHHCCC KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADE EEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC SYDAVTSFETLEHVPEHECLSEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDEL CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHH LALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPNSKD HHHHHHHHEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGE CCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC LDEIVKLIDDERLSLYYGHDASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLD HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEE IAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQPEDAKFLVHPKCYFSMNAQRY EHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCE RVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM EEHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCHHHHHHHHHHCCC KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADE EEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC SYDAVTSFETLEHVPEHECLSEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDEL CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHH LALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPNSKD HHHHHHHHEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA