Click here to switch to the map view.

The map label for this gene is 167623321

Identifier: 167623321

GI number: 167623321

Start: 1678101

End: 1678676

Strand: Reverse

Name: 167623321

Synonym: Shal_1390

Alternate gene names: NA

Gene position: 1678676-1678101 (Counterclockwise)

Preceding gene: 167623322

Following gene: 167623319

Centisome position: 32.12

GC content: 45.14

Gene sequence:

>576_bases
ATGAAGTCCCTCTCTACCCTACTATTAGCAACTAGTGTGCTAGCATCAAGCGTACTACTTTCATCGTCATTACAGGCCAA
AGAAGTCTCTGGCGTACAGTTAGATGAATCCATCGATATCGATAGTCAAACATTGGTGTTAAATGGTGCTGGTGTGCGCA
GCAAGTTCTTTATCGACTTGTATGTTGGCAGTCTCTATGTGCCTAAGATCCTAGATTCAACTCAAGCTGTACTCGATGCA
CCAACTGTTGCAGTTCGTCTTAATATCACTTCTGGCATGATCACCGCAGAGAAGATGAAAGATGCCATCACCGAAGGTTT
CGATGATGCAACCGATGGCAATACCACGCCAATTGAAGCCCAAATTGAGCAATTTATGGGGCTATTTAGTGCTGAAATTG
TTGAGGGCGACCAGTTTACCTTTTTAGCCGATAAGGCTAACGGTGTAACCGCTTACAAGAATGGTGAGGCTCAGGCGACA
ATTGCCGGTGAAACGTTCCGTCAAGCACTGCTAAAAATTTGGTTGGGTAAAGAACCTGCCCAAGACAGCTTAAAAGAAGC
GATGTTGGGCGAGTAG

Upstream 100 bases:

>100_bases
TCACCAAAACAAAAACAAGCGGCATTGTTCCACCAAAATGGTCAATTCCAGTTAGGTTCTCGTGGATAATGGCCCTGTTC
TCTATCATTTTGAGGTTATT

Downstream 100 bases:

>100_bases
TCTTAGCCAAAAAGATAATCAATAAAAATAAAAGGAGCTATTCGCTCCTTTTTTTATGATTCTAATCACTAACGGACTCT
ATACGCTCTTAAAAACATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Exported Protein

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKSLSTLLLATSVLASSVLLSSSLQAKEVSGVQLDESIDIDSQTLVLNGAGVRSKFFIDLYVGSLYVPKILDSTQAVLDA
PTVAVRLNITSGMITAEKMKDAITEGFDDATDGNTTPIEAQIEQFMGLFSAEIVEGDQFTFLADKANGVTAYKNGEAQAT
IAGETFRQALLKIWLGKEPAQDSLKEAMLGE

Sequences:

>Translated_191_residues
MKSLSTLLLATSVLASSVLLSSSLQAKEVSGVQLDESIDIDSQTLVLNGAGVRSKFFIDLYVGSLYVPKILDSTQAVLDA
PTVAVRLNITSGMITAEKMKDAITEGFDDATDGNTTPIEAQIEQFMGLFSAEIVEGDQFTFLADKANGVTAYKNGEAQAT
IAGETFRQALLKIWLGKEPAQDSLKEAMLGE
>Mature_191_residues
MKSLSTLLLATSVLASSVLLSSSLQAKEVSGVQLDESIDIDSQTLVLNGAGVRSKFFIDLYVGSLYVPKILDSTQAVLDA
PTVAVRLNITSGMITAEKMKDAITEGFDDATDGNTTPIEAQIEQFMGLFSAEIVEGDQFTFLADKANGVTAYKNGEAQAT
IAGETFRQALLKIWLGKEPAQDSLKEAMLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20358; Mature: 20358

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSTLLLATSVLASSVLLSSSLQAKEVSGVQLDESIDIDSQTLVLNGAGVRSKFFIDL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCEEEEEECCCCCCEEEEEE
YVGSLYVPKILDSTQAVLDAPTVAVRLNITSGMITAEKMKDAITEGFDDATDGNTTPIEA
EECCCHHHHHHCCHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHH
QIEQFMGLFSAEIVEGDQFTFLADKANGVTAYKNGEAQATIAGETFRQALLKIWLGKEPA
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEECHHHHHHHHHHHHCCCCCC
QDSLKEAMLGE
HHHHHHHHCCC
>Mature Secondary Structure
MKSLSTLLLATSVLASSVLLSSSLQAKEVSGVQLDESIDIDSQTLVLNGAGVRSKFFIDL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCEEEEEECCCCCCEEEEEE
YVGSLYVPKILDSTQAVLDAPTVAVRLNITSGMITAEKMKDAITEGFDDATDGNTTPIEA
EECCCHHHHHHCCHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHH
QIEQFMGLFSAEIVEGDQFTFLADKANGVTAYKNGEAQATIAGETFRQALLKIWLGKEPA
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEECHHHHHHHHHHHHCCCCCC
QDSLKEAMLGE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA