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The map label for this gene is yhiU [C]

Identifier: 167623319

GI number: 167623319

Start: 1676111

End: 1677223

Strand: Reverse

Name: yhiU [C]

Synonym: Shal_1388

Alternate gene names: 167623319

Gene position: 1677223-1676111 (Counterclockwise)

Preceding gene: 167623321

Following gene: 167623318

Centisome position: 32.09

GC content: 45.28

Gene sequence:

>1113_bases
ATGAATATCAAAAGAGTCATCACTCGTCGTAAGCTGCTTGCTAGCTTAGTTACAGTCAGTCTATTGCCAGCATGCCAAGA
CTCGTCGATCGAACAGGCTTCGACGCCGAGTTATCAGTCTGTTAATGCACAGTCGTTAAATCTCAGTGAGGGATATCAAT
TTGTTCAAGAGTTTTCAGGCACCATTCGCGCTGGCAATACCACCGGAATAGGCTTTGAACTGGCCGGGAAAATCAAAACC
TTAGCGGTTGATAGTGGTGATAGAGTCAAGCAAGGTCAACTACTAGCAAAACTCGATACTCGCCTGTTAATGGCTGAAAA
AAATGAATTAGATGCAAGTCTCGCACAAAACAAAGCCGACCTAGATTTAGCCAAGGCCACATTAGGTAGAAGCCTTGAGC
TACAGCAACAAGGCTATGTATCTGAGCAGCAACTTGACGAGCTCAAAGGGCAACTCAGCAGCTTACTGGCAGCCAAAAAC
CGCTTAAGTGCATCATTACTTGCTAACCAATTAAAAATCGAAAAGTCGGATTTACTCGCACCATTTGATGGTGTCATAAG
CAAGCGTAGCCATAACTTAGGTGAAGTCATCGGTGTGGGCAGCCCTGTTTACACCATCATCGAGCAAAATAATATACAGG
CGTATGTGGGCGTTCCGGTGCAAATAGCCAATAACTTAACCACAGGTCAAAGCGTCGACTTAAGAGTCAGGCAGCAAGAT
TACCATGCAAGCATTGCAGGTATTGGCGCCGAGCTAAATCCGGTTACTCGCACGGTAGAATTAAGACTAACACTGCCGGA
TGACGCTAATGTTATTAACGGTGAGCTCAGTTACCTAAATTACAATAAAACCATTGCCAATCAAGGTTACTGGGTACCGA
TTAGCGCATTGACCGATGGGGTGCGCGGACTATGGAATATTTATGTCTTGAAGCCGTCTGATAATCAGCGGTTTAGTATT
GAACGCCGAGACGTCGAGATCATCTATACCGCTAAAGATAAAGCCTTTATCAATGGCGCGATTAGTCCGAAGGAGCAATA
TGTCTCGCAAGGATTACATAAACTGGTCGCAGGCCAAATAGTCACCCAGCAAACTCAGCTAGCGACGAGGTAA

Upstream 100 bases:

>100_bases
ACTGGACAGTCTAGTTTTGAATCACTAGACTAGGCAGTCTAGTTTAACCATTCATTAACCTAACGCTCGAGACTGCGTTA
CTAAATACAGGCTGAAAGTA

Downstream 100 bases:

>100_bases
AGCAGATGGTCAAGTCATTAGTTGAAAATGGTCGGCTGATAAGTTTGATCATCGCCCTGCTGATTGTTGCAGGCTTTGGC
GCAATATCTAGCCTTCCGCG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane-Fusion Protein; RND Efflux Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Efflux Protein; Membrane Fusion Protein; Transport/Efflux Transmembrane Protein; Multidrug Resistance Protein; RND Efflux System Membrane Fusion Protein; Efflux Transporter; Multidrug Efflux Transporter Protein; Component Of Multidrug Efflux System; Acriflavin Resistance Periplasmic Protein; HlyD-Family Secretion Protein; Lipoprotein; Acriflavin Resistance Protein; Efflux Pump Membrane Fusion Protein Component; HlyD-Like Secretion Protein; MFP Family Efflux Transporter; AcrA/E Family Efflux Transporter MFP Subunit; Multidrug Efflux Transporter Membrane Fusion Protein; RND Family Multidrug Transporter Membrane Fusion Protein; Periplasmic Linker Protein; HlyD Family Multidrug Efflux Protein; NolF Secretion Protein; Secretion Protein HlyD Family; Protein Secretion Protein; Secretion Protein Family Hlyd; Efflux Transporter MFP Subunit; Cation/Multidrug Efflux System Mebrane-Fusion Component; RND Efflux Transporter; Transport Transmembrane Protein; Nodulation Protein; Efflux Transmembrane Protein; Acriflavin Resistance Protein AcrE; Efflux Transporter Rnd Family Mfp Subunit; CzcB Subfamily Membrane Fusion Protein; Cation Efflux System; RND/Acr Family Transmembrane Transporter

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MNIKRVITRRKLLASLVTVSLLPACQDSSIEQASTPSYQSVNAQSLNLSEGYQFVQEFSGTIRAGNTTGIGFELAGKIKT
LAVDSGDRVKQGQLLAKLDTRLLMAEKNELDASLAQNKADLDLAKATLGRSLELQQQGYVSEQQLDELKGQLSSLLAAKN
RLSASLLANQLKIEKSDLLAPFDGVISKRSHNLGEVIGVGSPVYTIIEQNNIQAYVGVPVQIANNLTTGQSVDLRVRQQD
YHASIAGIGAELNPVTRTVELRLTLPDDANVINGELSYLNYNKTIANQGYWVPISALTDGVRGLWNIYVLKPSDNQRFSI
ERRDVEIIYTAKDKAFINGAISPKEQYVSQGLHKLVAGQIVTQQTQLATR

Sequences:

>Translated_370_residues
MNIKRVITRRKLLASLVTVSLLPACQDSSIEQASTPSYQSVNAQSLNLSEGYQFVQEFSGTIRAGNTTGIGFELAGKIKT
LAVDSGDRVKQGQLLAKLDTRLLMAEKNELDASLAQNKADLDLAKATLGRSLELQQQGYVSEQQLDELKGQLSSLLAAKN
RLSASLLANQLKIEKSDLLAPFDGVISKRSHNLGEVIGVGSPVYTIIEQNNIQAYVGVPVQIANNLTTGQSVDLRVRQQD
YHASIAGIGAELNPVTRTVELRLTLPDDANVINGELSYLNYNKTIANQGYWVPISALTDGVRGLWNIYVLKPSDNQRFSI
ERRDVEIIYTAKDKAFINGAISPKEQYVSQGLHKLVAGQIVTQQTQLATR
>Mature_370_residues
MNIKRVITRRKLLASLVTVSLLPACQDSSIEQASTPSYQSVNAQSLNLSEGYQFVQEFSGTIRAGNTTGIGFELAGKIKT
LAVDSGDRVKQGQLLAKLDTRLLMAEKNELDASLAQNKADLDLAKATLGRSLELQQQGYVSEQQLDELKGQLSSLLAAKN
RLSASLLANQLKIEKSDLLAPFDGVISKRSHNLGEVIGVGSPVYTIIEQNNIQAYVGVPVQIANNLTTGQSVDLRVRQQD
YHASIAGIGAELNPVTRTVELRLTLPDDANVINGELSYLNYNKTIANQGYWVPISALTDGVRGLWNIYVLKPSDNQRFSI
ERRDVEIIYTAKDKAFINGAISPKEQYVSQGLHKLVAGQIVTQQTQLATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789929, Length=377, Percent_Identity=22.8116710875332, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40422; Mature: 40422

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKRVITRRKLLASLVTVSLLPACQDSSIEQASTPSYQSVNAQSLNLSEGYQFVQEFSG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
TIRAGNTTGIGFELAGKIKTLAVDSGDRVKQGQLLAKLDTRLLMAEKNELDASLAQNKAD
CEECCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHCCCCH
LDLAKATLGRSLELQQQGYVSEQQLDELKGQLSSLLAAKNRLSASLLANQLKIEKSDLLA
HHHHHHHHCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PFDGVISKRSHNLGEVIGVGSPVYTIIEQNNIQAYVGVPVQIANNLTTGQSVDLRVRQQD
CHHHHHHHCCCCCHHHEECCCCEEEEEECCCEEEEEECCEEEECCCCCCCCEEEEEECCC
YHASIAGIGAELNPVTRTVELRLTLPDDANVINGELSYLNYNKTIANQGYWVPISALTDG
HHHHHHHCCCCCCCCEEEEEEEEECCCCCCEECCEEEEEECCCEECCCCEEEEHHHHHHC
VRGLWNIYVLKPSDNQRFSIERRDVEIIYTAKDKAFINGAISPKEQYVSQGLHKLVAGQI
CCCEEEEEEEECCCCCEEEEEECCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHH
VTQQTQLATR
HHHHHHHCCC
>Mature Secondary Structure
MNIKRVITRRKLLASLVTVSLLPACQDSSIEQASTPSYQSVNAQSLNLSEGYQFVQEFSG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
TIRAGNTTGIGFELAGKIKTLAVDSGDRVKQGQLLAKLDTRLLMAEKNELDASLAQNKAD
CEECCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHCCCCH
LDLAKATLGRSLELQQQGYVSEQQLDELKGQLSSLLAAKNRLSASLLANQLKIEKSDLLA
HHHHHHHHCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PFDGVISKRSHNLGEVIGVGSPVYTIIEQNNIQAYVGVPVQIANNLTTGQSVDLRVRQQD
CHHHHHHHCCCCCHHHEECCCCEEEEEECCCEEEEEECCEEEECCCCCCCCEEEEEECCC
YHASIAGIGAELNPVTRTVELRLTLPDDANVINGELSYLNYNKTIANQGYWVPISALTDG
HHHHHHHCCCCCCCCEEEEEEEEECCCCCCEECCEEEEEECCCEECCCCEEEEHHHHHHC
VRGLWNIYVLKPSDNQRFSIERRDVEIIYTAKDKAFINGAISPKEQYVSQGLHKLVAGQI
CCCEEEEEEEECCCCCEEEEEECCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHH
VTQQTQLATR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA