| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yeeI [C]
Identifier: 167623287
GI number: 167623287
Start: 1630815
End: 1631639
Strand: Reverse
Name: yeeI [C]
Synonym: Shal_1355
Alternate gene names: 167623287
Gene position: 1631639-1630815 (Counterclockwise)
Preceding gene: 167623288
Following gene: 167623286
Centisome position: 31.22
GC content: 43.39
Gene sequence:
>825_bases ATGTTAGCTATTTTTCTTATCCTGCTTATCAGCGGTAGTGTGATTGCATGGATTGCAAGTGCGTCATGGCGCGCTCGTCG TCGACGAAAACATATTAGCCAACAGCCTTTTCCCCATGAATGGCGTAATATTTTAAAACGGCGTATTCCGTTCTTTAGAG TATTACCTGCGGATCTGCAGCTACAGCTGAAAAAACACATTCAAATCTTTATCGCAGAAAAGCATTTTGTCGGATGCGAT GGCCTGCAAATCGATGATGATATTCGCGTCACTGTAGCCGCACAAGCCTGCTTATTATTACTCAATAGGCAAACCGACTT TTATCCAAGATTAAAAGAGATCCTGATTTATCCGTCCGCATTTATTGTCGAAAACCAGCAGCAACATGGTGCAGGAGTCG TGTCTGATCAACGAAGAGTGTTATCGGGTGAGTCATGGCAACATGGTCGAGTGATATTGTCTTGGCAAACAACCCAGCAC GATGCCGCAGTACCAGATGATGGCAGTAATGTGGTGATCCATGAGTTTGCCCATCAATTAGATCAAGAAGATGGTAGTGC GAACGGTGCCCCAATTCTAAAAAATATCTCAGATTACGCATCTTGGTCTGAAGTACTAATGCAAGAGTATCAAAGCCTAG TCAATGCCACTCAATACGGTGAGTACTCACTATTTAGCTACTATGGCGCCACGAACCCTGCGGAGTTTTTTGCCGTAATA AGTGAAGTATTTTTTGAGAAACCTCATGAGTTTATCAATCAACATCCGGCGCTTTATCAAGAGTTGAGATCCTTCTACCA ACTCGATCCAGTGAATTGGCAGTAA
Upstream 100 bases:
>100_bases AATTTAATACATACTAATCCAACAAGCCCGTGGTTGAATCTTGTCCACCGTGTCCATATATCATGATTAACGCAAATAAA TCTTAATAGAAAGGAAAGCT
Downstream 100 bases:
>100_bases CTCATAAACCTCTATAGAGTTAGTGTCAGTAAAACGGCTAGATGATTACAAGGATAGATATGTTCAAACTAAGTGCCTCG AAAGCAATATGTATTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQLQLKKHIQIFIAEKHFVGCD GLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSAFIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQH DAAVPDDGSNVVIHEFAHQLDQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ
Sequences:
>Translated_274_residues MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQLQLKKHIQIFIAEKHFVGCD GLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSAFIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQH DAAVPDDGSNVVIHEFAHQLDQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ >Mature_274_residues MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQLQLKKHIQIFIAEKHFVGCD GLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSAFIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQH DAAVPDDGSNVVIHEFAHQLDQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ
Specific function: Unknown
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=237, Percent_Identity=33.7552742616034, Blast_Score=124, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 31623; Mature: 31623
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQ CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCHHHH LQLKKHIQIFIAEKHFVGCDGLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSA HHHHHCEEEEEECCCEECCCCCEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH FIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQHDAAVPDDGSNVVIHEFAHQL HEECCCHHCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH DQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHH SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ HHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQ CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCHHHH LQLKKHIQIFIAEKHFVGCDGLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSA HHHHHCEEEEEECCCEECCCCCEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH FIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQHDAAVPDDGSNVVIHEFAHQL HEECCCHHCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH DQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHH SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ HHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]