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The map label for this gene is 167623254

Identifier: 167623254

GI number: 167623254

Start: 1601163

End: 1602059

Strand: Direct

Name: 167623254

Synonym: Shal_1321

Alternate gene names: NA

Gene position: 1601163-1602059 (Clockwise)

Preceding gene: 167623251

Following gene: 167623255

Centisome position: 30.63

GC content: 48.05

Gene sequence:

>897_bases
ATGAGCCAATTGAAAACAGACTGGGTACGCATCGCAACTGAGGGCGCAACGTTTCGTAATGTCCCAATTGAACGTCAATG
GCTAGTCGATATTGCTGAAACCTATGATCCTAAAACTTATGGTGCGCGCATTTGGCCTGATCACCGCCGTTGGTATGGCG
CGTGGGGTGACGTGATAGAAGTGAAAACCGAAGAGCATGACGGCAAGTTAGTGCTGTTTGGTAAGTTGAACCCTAACTCC
CAATTTATTATGGCTAACGAGAATGACCAAAAGGTCTACACCTCGATTGAGCTTGACCCGAATTTTGCCGCCACAGGCAA
AGCCTACCTAACAGGCCTTGGTGTTACCGATGAGCCTGCAAGCCTTGGCACTGACCGCCTTAAATTTGGTGCTAAAGAGC
GTCTTGAAACGCACCAATACGGCGCGCCAGAGCAGCTAGTTATTAGCTACCCAGCAGTAGACAGTGAAGAGCTGATCACC
CCTGAAAACCAAAAGGCGTTTTTCAGCATTGTAGGCAAGTTTTTTAAATCCCTTACGCCGCATCAGATAAACAGCACTGA
GCATGTAAGCAACACTTCTGAGGAAGAACCCATGACTAAAGAACAGCATGAAGCCTTGATGGGCCAATTTGCATCTATCG
GCACTCGATTAGAAAGCCTTGAAGCAAAAACAGAAGCTTTCAGTGTAAAGCCGCCAGAAACCGAAGAAGAGCAAGCGCCT
GCAGGTGAGCCGCAAAATGGTATCACGGCAGAGCAGTTCAGCACGCTTAATGAAACGCTAACGAGCCTAACCGCCAAAGT
TGATGGTATGGAAACTCAGTTTAAAACGCTAAGCCAAGAAACGGGCGGCCAAGAGCCTGATCCTGCTGGTCTTGGTGAAC
AATTCTCGGTTGTATAA

Upstream 100 bases:

>100_bases
AATTCCTCCGAACCAAACCGAGTGCCAGCGCCGTTGCAGCTGGCTATGCTGCCTGCAATATCTCAACTTATCGCATTCAA
ACCACTAACCGGACTATGTA

Downstream 100 bases:

>100_bases
CTCGCTGCAATTGATAGCTGACATTCATCACTAAACAAGAGAGAGCAAAATGAATTTTTTAACACCAGTCGCAAAAGCCT
GTTTGCTGGCATATACCAGC

Product: capsid scaffolding

Products: NA

Alternate protein names: Capsid Scaffolding; Capsid Scaffolding Protein; Phage Capsid Scaffolding; Capsid Scaffolding Protein O; Phage Capsid Scaffolding Protein GpO; Phage-Related Capsid Scaffolding Protein; Scaffold; V Protein Bacteriophage; Capsid Protein; Presumed Capsid Scaffolding Protein; Capsid Scafolding Protein; Scaffold Protein; Phage-Related Capsid Scaffold Protein; Phage-Related Capsid Scaffold Bacteriophage Protein; Presumed Capsid-Scaffolding Protein; Phage P2 Capsid Scaffolding GpO-Like Protein; Capsid Scaffolding Protein Bacteriophage Origin; Bacteriophage Protein; Bacteriophage P2 GPO Capsid Protein; Prophage Capsid Scaffolding Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSQLKTDWVRIATEGATFRNVPIERQWLVDIAETYDPKTYGARIWPDHRRWYGAWGDVIEVKTEEHDGKLVLFGKLNPNS
QFIMANENDQKVYTSIELDPNFAATGKAYLTGLGVTDEPASLGTDRLKFGAKERLETHQYGAPEQLVISYPAVDSEELIT
PENQKAFFSIVGKFFKSLTPHQINSTEHVSNTSEEEPMTKEQHEALMGQFASIGTRLESLEAKTEAFSVKPPETEEEQAP
AGEPQNGITAEQFSTLNETLTSLTAKVDGMETQFKTLSQETGGQEPDPAGLGEQFSVV

Sequences:

>Translated_298_residues
MSQLKTDWVRIATEGATFRNVPIERQWLVDIAETYDPKTYGARIWPDHRRWYGAWGDVIEVKTEEHDGKLVLFGKLNPNS
QFIMANENDQKVYTSIELDPNFAATGKAYLTGLGVTDEPASLGTDRLKFGAKERLETHQYGAPEQLVISYPAVDSEELIT
PENQKAFFSIVGKFFKSLTPHQINSTEHVSNTSEEEPMTKEQHEALMGQFASIGTRLESLEAKTEAFSVKPPETEEEQAP
AGEPQNGITAEQFSTLNETLTSLTAKVDGMETQFKTLSQETGGQEPDPAGLGEQFSVV
>Mature_297_residues
SQLKTDWVRIATEGATFRNVPIERQWLVDIAETYDPKTYGARIWPDHRRWYGAWGDVIEVKTEEHDGKLVLFGKLNPNSQ
FIMANENDQKVYTSIELDPNFAATGKAYLTGLGVTDEPASLGTDRLKFGAKERLETHQYGAPEQLVISYPAVDSEELITP
ENQKAFFSIVGKFFKSLTPHQINSTEHVSNTSEEEPMTKEQHEALMGQFASIGTRLESLEAKTEAFSVKPPETEEEQAPA
GEPQNGITAEQFSTLNETLTSLTAKVDGMETQFKTLSQETGGQEPDPAGLGEQFSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33150; Mature: 33019

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLKTDWVRIATEGATFRNVPIERQWLVDIAETYDPKTYGARIWPDHRRWYGAWGDVIE
CCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEE
VKTEEHDGKLVLFGKLNPNSQFIMANENDQKVYTSIELDPNFAATGKAYLTGLGVTDEPA
EEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCH
SLGTDRLKFGAKERLETHQYGAPEQLVISYPAVDSEELITPENQKAFFSIVGKFFKSLTP
HCCCHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
HQINSTEHVSNTSEEEPMTKEQHEALMGQFASIGTRLESLEAKTEAFSVKPPETEEEQAP
CCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCC
AGEPQNGITAEQFSTLNETLTSLTAKVDGMETQFKTLSQETGGQEPDPAGLGEQFSVV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQLKTDWVRIATEGATFRNVPIERQWLVDIAETYDPKTYGARIWPDHRRWYGAWGDVIE
CCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEE
VKTEEHDGKLVLFGKLNPNSQFIMANENDQKVYTSIELDPNFAATGKAYLTGLGVTDEPA
EEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCH
SLGTDRLKFGAKERLETHQYGAPEQLVISYPAVDSEELITPENQKAFFSIVGKFFKSLTP
HCCCHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
HQINSTEHVSNTSEEEPMTKEQHEALMGQFASIGTRLESLEAKTEAFSVKPPETEEEQAP
CCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCC
AGEPQNGITAEQFSTLNETLTSLTAKVDGMETQFKTLSQETGGQEPDPAGLGEQFSVV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA