Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623253

Identifier: 167623253

GI number: 167623253

Start: 1599150

End: 1601003

Strand: Reverse

Name: 167623253

Synonym: Shal_1320

Alternate gene names: NA

Gene position: 1601003-1599150 (Counterclockwise)

Preceding gene: 167623277

Following gene: 167623252

Centisome position: 30.63

GC content: 48.92

Gene sequence:

>1854_bases
ATGAATACACTGCAGGTCAGTTGGTTTATTTGTTCACTACTTACGGAGTCGAATCACTCACGCATGGCCTACTCTCCTGA
AATTCGCGAAGCGGTAAAGCGGCTCTATTTAAGGCGCTGGACACCGGACGAGATCCGTCTCGAACTCGACCTGCCTAATA
CGCGGGTGATTTACTTTTGGGCTGACAAATACAGTTGGCGCGATCTGCTGCGCGAGGAAGAAGTCGACGAGGCCATTGCT
CGGCGCATTGTGATGCTGACCGATATCGCTGATAAATCTGGCGGGCAACTTAAAGAGCTCGACATGCTGATTGAAAAGCA
TGTGAAGCTGAAAAAGCAGCGCTTAATCAGTGAAGGCCATTCGTTCGGTGCTAATGGCAGTACTAAGAACAGTGGCAAAA
ATAGCAAAGGCAGCGATCAGCAAAATAATGCAGCGCCAAGCAAGCGTAAAGGTCGTAAACGTAAGAATGACGTTAGCCAT
TTAACCGAGGAAGATTTTAAAGCCTGGTACGCTTCATTATTTGAATATCAAAAGGTGATGCATGAAAACCTGCATCGGCG
TATTCGTAATATTCTTAAGTCGCGCCAGATTGGTGCCACCTATTACTTTGCCGGTGAAGCATTCGAGCAAGCGGTACTTA
CCGGGGATCCGCAAATATTCCTCTCGGCTTCACGTTCGCAGGCCGAAGTATTCCGCACCTATATTGTGCAAATTGCGCAG
CAGTTCTTTGAAATAGAATTAACCGGTAACCCGATTGTATTGCACACCGCACACGGTGATGCCGAGCTAAGGTTTCTGTC
GACGAATAGCAAAACCGCGCAGAGTTACCACGGCCATGTGTATGTGGATGAATACTTTTGGATAGGCAAGTTTGATGTAC
TCAACAAACTAGCCTCTGCTATGGCCACCCATAAAAACTGGCGCAAAACCTACTTTTCTACCCCATCAACCAAAGCGCAC
CCCGCTTACAGCTTTTGGACGGGGGATCACTGGCGCCGCGGTATGAGTGATCGCGAAGAGGTGGAGTTTCCCACCTTTGA
TGCCATGCGTGACCGTGGCCGGTTTTGCCCCGACAAGCAATGGCGCTATGTGGTCACCATTGAAGATGCCCTTGCTGGCG
GTTGTGGACTGTTCGACATTGAGGAGCTGCGCGACGAATACAACGACGATGACTTTAAAAACCTGTTTATGTGCATTTTT
GTTGATGATGCCGATAGCGTATTTAAGTTCAGCGACCTTGAAAAATGCATGGTCGAGTCGGCTCGCTGGCAAGATCACAA
ACCCAAAGAGCAACGGCCATTTGGCAATCGCGAGGTTTGGCTCGGTTATGACCCATCACGAACGCGCGACAATGCCACCT
TAGTAGTGATTGCACCAGGTGAAAAGAAAGGCGAGAAATTCAGAGTACTTGAAAAACACTATTGGCGCGGCTTGAACTTT
TCCCATCACGTAAGCGAAATACAAAAAGTCTATGCCCGTTATCGAGTCACTTACATTGGCGTTGATACCACAGGCATTGG
CGCGGGCGTGTTCGACTCGATTAGCACCTTATTTCCGCGCGAGGCCACGGCGATTCATTACAGCGTTTCAAGCAAAACTC
GCTTAGTACTGAAAATGATTGATGTGGTTGAAAGTGGCCGCATCGAGTGGGACGCCTCCCACAAAGACATTGCCATGAGC
TGCTTATCAATACGCAAGACCACCACCGACACAGGCGGGGCTATCACTTTTAAAGCCAGCCGCGATAACGTAACCGGCCA
CGCCGATGTGTTTTTTGCCATCGCCCACGCCGTTATTAACGAACCACTGAACTTTGCACATAAGAGAACATCATCATGGA
CAATGCAGCATTAG

Upstream 100 bases:

>100_bases
AGCTGCAACGGCGCTGGCACTCGGTTTGGTTCGGAGGAATTCGGATATAGGGCTATATCCGAAACAGGCCGAACATTAGT
CCGTTATTGCCTTGTAACTT

Downstream 100 bases:

>100_bases
CCGCCACCGAAGAGTTAGCAACCGAAACAGAAACGGCTAACGCGCCAGTGGTGTTTAGTTTACCCGAGCAAGTGATGCCT
AACATGTGGCTCACCGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Terminase Related Protein; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase Large Subunit; Fels-2 Prophage Protein; Prophage Large Terminase Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Phage Terminase Subunit GpP; Terminase Large Subunit; Mu-Like Prophage FluMu Protein Gp; DNA-Dependent ATPase Terminase Subunit; Prophage; Terminase ATPase Subunit Bacteriophage Origin; ATPase Subunit Of Terminase; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage Gene; Terminase Subunit; Phage-Related Terminase; Phage P2 Terminase ATPase Subunit GpP-Like Protein

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MNTLQVSWFICSLLTESNHSRMAYSPEIREAVKRLYLRRWTPDEIRLELDLPNTRVIYFWADKYSWRDLLREEEVDEAIA
RRIVMLTDIADKSGGQLKELDMLIEKHVKLKKQRLISEGHSFGANGSTKNSGKNSKGSDQQNNAAPSKRKGRKRKNDVSH
LTEEDFKAWYASLFEYQKVMHENLHRRIRNILKSRQIGATYYFAGEAFEQAVLTGDPQIFLSASRSQAEVFRTYIVQIAQ
QFFEIELTGNPIVLHTAHGDAELRFLSTNSKTAQSYHGHVYVDEYFWIGKFDVLNKLASAMATHKNWRKTYFSTPSTKAH
PAYSFWTGDHWRRGMSDREEVEFPTFDAMRDRGRFCPDKQWRYVVTIEDALAGGCGLFDIEELRDEYNDDDFKNLFMCIF
VDDADSVFKFSDLEKCMVESARWQDHKPKEQRPFGNREVWLGYDPSRTRDNATLVVIAPGEKKGEKFRVLEKHYWRGLNF
SHHVSEIQKVYARYRVTYIGVDTTGIGAGVFDSISTLFPREATAIHYSVSSKTRLVLKMIDVVESGRIEWDASHKDIAMS
CLSIRKTTTDTGGAITFKASRDNVTGHADVFFAIAHAVINEPLNFAHKRTSSWTMQH

Sequences:

>Translated_617_residues
MNTLQVSWFICSLLTESNHSRMAYSPEIREAVKRLYLRRWTPDEIRLELDLPNTRVIYFWADKYSWRDLLREEEVDEAIA
RRIVMLTDIADKSGGQLKELDMLIEKHVKLKKQRLISEGHSFGANGSTKNSGKNSKGSDQQNNAAPSKRKGRKRKNDVSH
LTEEDFKAWYASLFEYQKVMHENLHRRIRNILKSRQIGATYYFAGEAFEQAVLTGDPQIFLSASRSQAEVFRTYIVQIAQ
QFFEIELTGNPIVLHTAHGDAELRFLSTNSKTAQSYHGHVYVDEYFWIGKFDVLNKLASAMATHKNWRKTYFSTPSTKAH
PAYSFWTGDHWRRGMSDREEVEFPTFDAMRDRGRFCPDKQWRYVVTIEDALAGGCGLFDIEELRDEYNDDDFKNLFMCIF
VDDADSVFKFSDLEKCMVESARWQDHKPKEQRPFGNREVWLGYDPSRTRDNATLVVIAPGEKKGEKFRVLEKHYWRGLNF
SHHVSEIQKVYARYRVTYIGVDTTGIGAGVFDSISTLFPREATAIHYSVSSKTRLVLKMIDVVESGRIEWDASHKDIAMS
CLSIRKTTTDTGGAITFKASRDNVTGHADVFFAIAHAVINEPLNFAHKRTSSWTMQH
>Mature_617_residues
MNTLQVSWFICSLLTESNHSRMAYSPEIREAVKRLYLRRWTPDEIRLELDLPNTRVIYFWADKYSWRDLLREEEVDEAIA
RRIVMLTDIADKSGGQLKELDMLIEKHVKLKKQRLISEGHSFGANGSTKNSGKNSKGSDQQNNAAPSKRKGRKRKNDVSH
LTEEDFKAWYASLFEYQKVMHENLHRRIRNILKSRQIGATYYFAGEAFEQAVLTGDPQIFLSASRSQAEVFRTYIVQIAQ
QFFEIELTGNPIVLHTAHGDAELRFLSTNSKTAQSYHGHVYVDEYFWIGKFDVLNKLASAMATHKNWRKTYFSTPSTKAH
PAYSFWTGDHWRRGMSDREEVEFPTFDAMRDRGRFCPDKQWRYVVTIEDALAGGCGLFDIEELRDEYNDDDFKNLFMCIF
VDDADSVFKFSDLEKCMVESARWQDHKPKEQRPFGNREVWLGYDPSRTRDNATLVVIAPGEKKGEKFRVLEKHYWRGLNF
SHHVSEIQKVYARYRVTYIGVDTTGIGAGVFDSISTLFPREATAIHYSVSSKTRLVLKMIDVVESGRIEWDASHKDIAMS
CLSIRKTTTDTGGAITFKASRDNVTGHADVFFAIAHAVINEPLNFAHKRTSSWTMQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71302; Mature: 71302

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLQVSWFICSLLTESNHSRMAYSPEIREAVKRLYLRRWTPDEIRLELDLPNTRVIYFW
CCCEEHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
ADKYSWRDLLREEEVDEAIARRIVMLTDIADKSGGQLKELDMLIEKHVKLKKQRLISEGH
ECCCCHHHHHHHHHHHHHHHHHEEHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SFGANGSTKNSGKNSKGSDQQNNAAPSKRKGRKRKNDVSHLTEEDFKAWYASLFEYQKVM
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HENLHRRIRNILKSRQIGATYYFAGEAFEQAVLTGDPQIFLSASRSQAEVFRTYIVQIAQ
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH
QFFEIELTGNPIVLHTAHGDAELRFLSTNSKTAQSYHGHVYVDEYFWIGKFDVLNKLASA
HHEEEEECCCEEEEEECCCCCEEEEEECCCCCHHCCCCEEEEECEEECCHHHHHHHHHHH
MATHKNWRKTYFSTPSTKAHPAYSFWTGDHWRRGMSDREEVEFPTFDAMRDRGRFCPDKQ
HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHCCCCCCHHCCCCCHHHHHHCCCCCCCCC
WRYVVTIEDALAGGCGLFDIEELRDEYNDDDFKNLFMCIFVDDADSVFKFSDLEKCMVES
CEEEEEEEHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
ARWQDHKPKEQRPFGNREVWLGYDPSRTRDNATLVVIAPGEKKGEKFRVLEKHYWRGLNF
HCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCH
SHHVSEIQKVYARYRVTYIGVDTTGIGAGVFDSISTLFPREATAIHYSVSSKTRLVLKMI
HHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
DVVESGRIEWDASHKDIAMSCLSIRKTTTDTGGAITFKASRDNVTGHADVFFAIAHAVIN
HHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
EPLNFAHKRTSSWTMQH
CCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNTLQVSWFICSLLTESNHSRMAYSPEIREAVKRLYLRRWTPDEIRLELDLPNTRVIYFW
CCCEEHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
ADKYSWRDLLREEEVDEAIARRIVMLTDIADKSGGQLKELDMLIEKHVKLKKQRLISEGH
ECCCCHHHHHHHHHHHHHHHHHEEHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SFGANGSTKNSGKNSKGSDQQNNAAPSKRKGRKRKNDVSHLTEEDFKAWYASLFEYQKVM
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HENLHRRIRNILKSRQIGATYYFAGEAFEQAVLTGDPQIFLSASRSQAEVFRTYIVQIAQ
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH
QFFEIELTGNPIVLHTAHGDAELRFLSTNSKTAQSYHGHVYVDEYFWIGKFDVLNKLASA
HHEEEEECCCEEEEEECCCCCEEEEEECCCCCHHCCCCEEEEECEEECCHHHHHHHHHHH
MATHKNWRKTYFSTPSTKAHPAYSFWTGDHWRRGMSDREEVEFPTFDAMRDRGRFCPDKQ
HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHCCCCCCHHCCCCCHHHHHHCCCCCCCCC
WRYVVTIEDALAGGCGLFDIEELRDEYNDDDFKNLFMCIFVDDADSVFKFSDLEKCMVES
CEEEEEEEHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
ARWQDHKPKEQRPFGNREVWLGYDPSRTRDNATLVVIAPGEKKGEKFRVLEKHYWRGLNF
HCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCH
SHHVSEIQKVYARYRVTYIGVDTTGIGAGVFDSISTLFPREATAIHYSVSSKTRLVLKMI
HHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
DVVESGRIEWDASHKDIAMSCLSIRKTTTDTGGAITFKASRDNVTGHADVFFAIAHAVIN
HHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
EPLNFAHKRTSSWTMQH
CCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA