Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623235

Identifier: 167623235

GI number: 167623235

Start: 1586452

End: 1586625

Strand: Reverse

Name: 167623235

Synonym: Shal_1302

Alternate gene names: NA

Gene position: 1586625-1586452 (Counterclockwise)

Preceding gene: 167623236

Following gene: 167623232

Centisome position: 30.35

GC content: 48.28

Gene sequence:

>174_bases
ATGATGAACGGCGGCAATATTCTTCTTTTCGATAAAGTGAAGAAACAGATACTCGGCCACTCCGATATCAAAGACACCAT
GCGTTACGCCCACTTCGCCCCCGATCACCTGGACGACGCCATCACCAAAAACCCAATAGCAACGCTATTGGGTAAAAGTG
AGATGACGGAGTAG

Upstream 100 bases:

>100_bases
TAAATACAGTTCCTCATTCGAATGTGCGTAGGCGTACCTCGCCAGAACACGTAAATACAGATTTTTACAGAAGAAATAAA
GCTTTGGTGCCGACCACTTT

Downstream 100 bases:

>100_bases
GGTGAGTACGCCTTGGTCGCTGAAAAAATAATGGTTGGCTATTTTTACTAGCGATAGCCAACAGTTATTTTCCGTATAAG
CAATTCGTTATGTCTTTTCT

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein; Integrase; Bacteriophage Integrase

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE

Sequences:

>Translated_57_residues
MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE
>Mature_57_residues
MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6386; Mature: 6386

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE
CCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCC
>Mature Secondary Structure
MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE
CCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA