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The map label for this gene is ylbG [H]

Identifier: 167623223

GI number: 167623223

Start: 1570182

End: 1570508

Strand: Direct

Name: ylbG [H]

Synonym: Shal_1289

Alternate gene names: 167623223

Gene position: 1570182-1570508 (Clockwise)

Preceding gene: 167623222

Following gene: 167623225

Centisome position: 30.04

GC content: 42.81

Gene sequence:

>327_bases
ATGTTGCATACTAACAATCCAATCATTAAACACAAAGCTGGTTTGCTTAATCTAGCCGAAGAGCTCGGTAATGTTTCTAG
AGCTTGTAAAGTTATGGGCGTATCAAGAGATACATTTTACCGTTATCAGGAGCTTGTTGAGGACGGTGGGATAGATGCGT
TAATCGAAAAGACCCGAAGAACACCAAACCTTAAAAATAGAGTCGACGAAGCAACTGAACAATCGGTGATTCAATACGCT
ATAGACTTCCCCGCACACGGCCAACACCGAACCAGTAATGAGCTACGCAAGTTAGGTGTTTTTGTTTCAGGCAGTGGCGT
TCGTTAA

Upstream 100 bases:

>100_bases
AGATCCCGACTAGATCTGACATATCAACTTGATTAGTTGAGAGTTACCCGTTTTGATAGAAGGTGTCTAATCTTTAATCA
AAACAAAAAAGGTAACTCTC

Downstream 100 bases:

>100_bases
ATCTGGCTTCGTTACAATTTAGAGAACTTTAAAAAGCGACTTAAAGCGTTAGAAGAAAAAGTCACTCGCGAAAGGATAAT
TTTGTCTGGTGCTCAAGTTG

Product: integrase, catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLHTNNPIIKHKAGLLNLAEELGNVSRACKVMGVSRDTFYRYQELVEDGGIDALIEKTRRTPNLKNRVDEATEQSVIQYA
IDFPAHGQHRTSNELRKLGVFVSGSGVR

Sequences:

>Translated_108_residues
MLHTNNPIIKHKAGLLNLAEELGNVSRACKVMGVSRDTFYRYQELVEDGGIDALIEKTRRTPNLKNRVDEATEQSVIQYA
IDFPAHGQHRTSNELRKLGVFVSGSGVR
>Mature_108_residues
MLHTNNPIIKHKAGLLNLAEELGNVSRACKVMGVSRDTFYRYQELVEDGGIDALIEKTRRTPNLKNRVDEATEQSVIQYA
IDFPAHGQHRTSNELRKLGVFVSGSGVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12092; Mature: 12092

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHTNNPIIKHKAGLLNLAEELGNVSRACKVMGVSRDTFYRYQELVEDGGIDALIEKTRR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCC
TPNLKNRVDEATEQSVIQYAIDFPAHGQHRTSNELRKLGVFVSGSGVR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MLHTNNPIIKHKAGLLNLAEELGNVSRACKVMGVSRDTFYRYQELVEDGGIDALIEKTRR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCC
TPNLKNRVDEATEQSVIQYAIDFPAHGQHRTSNELRKLGVFVSGSGVR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]