Click here to switch to the map view.

The map label for this gene is 167623221

Identifier: 167623221

GI number: 167623221

Start: 1568632

End: 1569165

Strand: Direct

Name: 167623221

Synonym: Shal_1287

Alternate gene names: NA

Gene position: 1568632-1569165 (Clockwise)

Preceding gene: 167623219

Following gene: 167623222

Centisome position: 30.01

GC content: 40.82

Gene sequence:

>534_bases
ATGAGCCGTATTCTTCCAGTTTCAAACCCACAAGGTGATGTTGCGACGACGCTATCTGCAATTAAAAGTAAGTTAGGAAT
GGTACCTAACCTTTACGCGACAGTTGGTCACTCACCAACGGTGCTTAATGCGTATCTTACATTTAGTGATGCTTTATCCA
AAGGACGTTTAAGTACGAAACAACGAGAGTTAATAGCTTTGGCTATAGCTCAGGTAAACCAGTGTCAGTACTGCTTATCT
GCTCATAGCCTTATTGCTGGTAGTACAGGGTTAGGTGAGAAAAATATTAAGGAAGCAAGAGAAGGTAAGGCTGATAATGC
GCTGGATCAAGCACTGATTACCTTAGCCGTAGATTTGGTTGAGCAGCGCGGTGAACTCACTACAGAACAATTAGATATAG
CTAATAAAAATGGAGTTGATAGCGAGTTGATCTTTGAAGTGCTAGCCCTAGTGACGGCTAATATATTTACCAATTATGCA
AACCACTTAGCGCAAACAGATATTGATTTCCCGTTAGTTAGTCTTACTGTTTGA

Upstream 100 bases:

>100_bases
TGAGACTCTGAGTATGTATATCTAGATTAATAGTGATAAATCGTATTGTTGAGAGTGTCAATATCAATAACGTAAATTCA
CTTAATCAAAGGAGCTCAGC

Downstream 100 bases:

>100_bases
TATTGAAAGGAGTTATTTATGCAGCAAGAAAAAGGTTACTTGGTAAGTCTAGTAGGTGTTGTATTGACGTTATTATGGAT
TGGCGTATTTAAGTTTACTC

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase Like Protein AhpD Family; Carboxymuconolactone Decarboxylase; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Alkylhydroperoxidase-Like Protein AhpD Family; MIP-(Macrophage Infectivity Potentiator)-Like Protein; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; AhpD-Like Alkylhydroperoxidase; Carboxymuconolactone Decarboxylase Family; Alkylhydroperoxidase AhpD Domain Protein; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Alkylhydroperoxidase-Like Protein; Mip Protein; Peroxidase; Alkylhydroperoxidase AhpD Family Protein; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSRILPVSNPQGDVATTLSAIKSKLGMVPNLYATVGHSPTVLNAYLTFSDALSKGRLSTKQRELIALAIAQVNQCQYCLS
AHSLIAGSTGLGEKNIKEAREGKADNALDQALITLAVDLVEQRGELTTEQLDIANKNGVDSELIFEVLALVTANIFTNYA
NHLAQTDIDFPLVSLTV

Sequences:

>Translated_177_residues
MSRILPVSNPQGDVATTLSAIKSKLGMVPNLYATVGHSPTVLNAYLTFSDALSKGRLSTKQRELIALAIAQVNQCQYCLS
AHSLIAGSTGLGEKNIKEAREGKADNALDQALITLAVDLVEQRGELTTEQLDIANKNGVDSELIFEVLALVTANIFTNYA
NHLAQTDIDFPLVSLTV
>Mature_176_residues
SRILPVSNPQGDVATTLSAIKSKLGMVPNLYATVGHSPTVLNAYLTFSDALSKGRLSTKQRELIALAIAQVNQCQYCLSA
HSLIAGSTGLGEKNIKEAREGKADNALDQALITLAVDLVEQRGELTTEQLDIANKNGVDSELIFEVLALVTANIFTNYAN
HLAQTDIDFPLVSLTV

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18940; Mature: 18809

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRILPVSNPQGDVATTLSAIKSKLGMVPNLYATVGHSPTVLNAYLTFSDALSKGRLSTK
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
QRELIALAIAQVNQCQYCLSAHSLIAGSTGLGEKNIKEAREGKADNALDQALITLAVDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EQRGELTTEQLDIANKNGVDSELIFEVLALVTANIFTNYANHLAQTDIDFPLVSLTV
HHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
SRILPVSNPQGDVATTLSAIKSKLGMVPNLYATVGHSPTVLNAYLTFSDALSKGRLSTK
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
QRELIALAIAQVNQCQYCLSAHSLIAGSTGLGEKNIKEAREGKADNALDQALITLAVDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EQRGELTTEQLDIANKNGVDSELIFEVLALVTANIFTNYANHLAQTDIDFPLVSLTV
HHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA