Click here to switch to the map view.

The map label for this gene is 167623212

Identifier: 167623212

GI number: 167623212

Start: 1559511

End: 1560509

Strand: Reverse

Name: 167623212

Synonym: Shal_1278

Alternate gene names: NA

Gene position: 1560509-1559511 (Counterclockwise)

Preceding gene: 167623215

Following gene: 167623208

Centisome position: 29.86

GC content: 49.15

Gene sequence:

>999_bases
TTGACCTTCTTATCGAATCCCCTATCGCTCAGCAGAGCAAGCTTGGCGAGCCTGCTTATCTGTACCTCCTTCCCAACCTT
GGCCGATCAGTGGCACTTTAGCTTTGATAACGATGTGGTAATTGGCCAAGATGGCGACTATTCCAATGGTTTCGTCTTCG
GTTGGCAGGCGCTTCCTCGAGCTGATTTTACGCTAGCACCTTGGCCATTTAGCTGGCAAAAAGGGTTGCGCTTTTCAGAC
CCTAACAAGACAGTGCAATGGGGGGCAAAGGTTTATCAAAGAATGTGGACCCCGAGTGAGATTGAACATGATTATACCCA
GCCCTATGATCGCCCCTACGCTGGTATTCTCGAACTGGAAAGCTTCACCGGCAGCTATAGCGCTAACTTGGCACAAAAGA
ATTGGTTTAGCATCGGCGTGATAGGCCCTGCATCTGGCGCTCAAGCCATGCAGGAGTTGGTGCATAAAATCACCCCTTCC
ACCCCTCCAAAAGGCTGGCAATATCAAGTTGAAAATCAACTGACTCTGCAGCTCGCTTATGAGGTGGATGCATTGGCGTT
TCGTCGAGAGGTAACCTATGACAGTCAATGGGAGCTAAGTGGTTACGGTCATACCATGCTGGGAAACTTTCGTTCTGAAG
CGAATCTAGGCTTTACCCTTCGCTGGGGAGATGATTTGGCAGATTCATTTGGCCAGTTAAGCAGCCATGCAGGACATTTC
GGTCAATATAGTGCTGTGGCACGTAAAAATGGTAGTTGGAGTGTATATGCTCGCGCCCAGGCTGGGTATCGTTTTAATGA
TCTCACCATTGACGGAGACGTTCCCTATGACTCCTATGTGCAGATAAAGCACCAACAAGCGAAGGCGAGTGCTGGGGTTA
TTTGGGCATTTCCCACTTGGTCAGTGAGCTGGAGCTTTGAAATTTACACGCCAGAATATGAGCCTGATCCGAATAAGTGG
CATGGCTATGGTGTGCTCAGCTACAGCTTTGTGTTGTAG

Upstream 100 bases:

>100_bases
GATTTGCACCTTAAGGCCGTTTAGGGCTATGCTGGACTCGTTGGTGTTATGTAGATCTTAGCCTGAAATCATACATTCCT
GACCTTTGAGGAGTCGCCCA

Downstream 100 bases:

>100_bases
CTAATCGTTAAGCCCAATCTTGTTAATGTTAAAAGCTGAAGGCCCACCCTATCTGCGGGCCTTTCTCGATAAAGTCCATC
TCATACTTAACTCCATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTFLSNPLSLSRASLASLLICTSFPTLADQWHFSFDNDVVIGQDGDYSNGFVFGWQALPRADFTLAPWPFSWQKGLRFSD
PNKTVQWGAKVYQRMWTPSEIEHDYTQPYDRPYAGILELESFTGSYSANLAQKNWFSIGVIGPASGAQAMQELVHKITPS
TPPKGWQYQVENQLTLQLAYEVDALAFRREVTYDSQWELSGYGHTMLGNFRSEANLGFTLRWGDDLADSFGQLSSHAGHF
GQYSAVARKNGSWSVYARAQAGYRFNDLTIDGDVPYDSYVQIKHQQAKASAGVIWAFPTWSVSWSFEIYTPEYEPDPNKW
HGYGVLSYSFVL

Sequences:

>Translated_332_residues
MTFLSNPLSLSRASLASLLICTSFPTLADQWHFSFDNDVVIGQDGDYSNGFVFGWQALPRADFTLAPWPFSWQKGLRFSD
PNKTVQWGAKVYQRMWTPSEIEHDYTQPYDRPYAGILELESFTGSYSANLAQKNWFSIGVIGPASGAQAMQELVHKITPS
TPPKGWQYQVENQLTLQLAYEVDALAFRREVTYDSQWELSGYGHTMLGNFRSEANLGFTLRWGDDLADSFGQLSSHAGHF
GQYSAVARKNGSWSVYARAQAGYRFNDLTIDGDVPYDSYVQIKHQQAKASAGVIWAFPTWSVSWSFEIYTPEYEPDPNKW
HGYGVLSYSFVL
>Mature_331_residues
TFLSNPLSLSRASLASLLICTSFPTLADQWHFSFDNDVVIGQDGDYSNGFVFGWQALPRADFTLAPWPFSWQKGLRFSDP
NKTVQWGAKVYQRMWTPSEIEHDYTQPYDRPYAGILELESFTGSYSANLAQKNWFSIGVIGPASGAQAMQELVHKITPST
PPKGWQYQVENQLTLQLAYEVDALAFRREVTYDSQWELSGYGHTMLGNFRSEANLGFTLRWGDDLADSFGQLSSHAGHFG
QYSAVARKNGSWSVYARAQAGYRFNDLTIDGDVPYDSYVQIKHQQAKASAGVIWAFPTWSVSWSFEIYTPEYEPDPNKWH
GYGVLSYSFVL

Specific function: Unknown

COG id: COG3528

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37560; Mature: 37429

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLSNPLSLSRASLASLLICTSFPTLADQWHFSFDNDVVIGQDGDYSNGFVFGWQALPR
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHCEEECCCCCEEEECCCCCCCCEEEEEECCCC
ADFTLAPWPFSWQKGLRFSDPNKTVQWGAKVYQRMWTPSEIEHDYTQPYDRPYAGILELE
CCCEECCCCCHHHCCCEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEE
SFTGSYSANLAQKNWFSIGVIGPASGAQAMQELVHKITPSTPPKGWQYQVENQLTLQLAY
CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEEE
EVDALAFRREVTYDSQWELSGYGHTMLGNFRSEANLGFTLRWGDDLADSFGQLSSHAGHF
EHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCC
GQYSAVARKNGSWSVYARAQAGYRFNDLTIDGDVPYDSYVQIKHQQAKASAGVIWAFPTW
CCHHHHEECCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEHHCCCCCCEEEEECCC
SVSWSFEIYTPEYEPDPNKWHGYGVLSYSFVL
EEEEEEEEECCCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
TFLSNPLSLSRASLASLLICTSFPTLADQWHFSFDNDVVIGQDGDYSNGFVFGWQALPR
CCCCCCCHHHHHHHHHHHHHHCCCCHHHCEEECCCCCEEEECCCCCCCCEEEEEECCCC
ADFTLAPWPFSWQKGLRFSDPNKTVQWGAKVYQRMWTPSEIEHDYTQPYDRPYAGILELE
CCCEECCCCCHHHCCCEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEE
SFTGSYSANLAQKNWFSIGVIGPASGAQAMQELVHKITPSTPPKGWQYQVENQLTLQLAY
CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEEE
EVDALAFRREVTYDSQWELSGYGHTMLGNFRSEANLGFTLRWGDDLADSFGQLSSHAGHF
EHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCC
GQYSAVARKNGSWSVYARAQAGYRFNDLTIDGDVPYDSYVQIKHQQAKASAGVIWAFPTW
CCHHHHEECCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEHHCCCCCCEEEEECCC
SVSWSFEIYTPEYEPDPNKWHGYGVLSYSFVL
EEEEEEEEECCCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA