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The map label for this gene is 167623207

Identifier: 167623207

GI number: 167623207

Start: 1552027

End: 1552545

Strand: Reverse

Name: 167623207

Synonym: Shal_1273

Alternate gene names: NA

Gene position: 1552545-1552027 (Counterclockwise)

Preceding gene: 167623208

Following gene: 167623202

Centisome position: 29.7

GC content: 46.63

Gene sequence:

>519_bases
ATGAAAATCCGATTCGAGAAAATCATCAATATCCCATATGGCTTGATGGTATGTTGCGCGCTGCTTATCACAGCTTGTGG
CGGAGGGGGCGATGACGCCGCTCCCGAGACTCCGGTTCCAGTTGAAACAACAACGACAACGACAACGACAACCACGACTA
CCACAACCGAAGATCCCGCTCCGGACCCAACCTCACTGGACGATCTGGTGGTTGATGCCGATAACAAGCTTGAGTCAGCT
TATATGTTGACGATAGATGTCGATAAAGACAGCATTCAAAGAGGTTACTTTTCACTGTGTGATGATTACCAAGCGCAAGG
TGATGGCTACTCGGTTAACTTTGATTCCTGTCTTTTTAGAGGGCCACTAACTCAAGGTAAACTCAGCAAAGAGGTCAAAG
TAGCCAATCATGAAAGCCAGCTCATTGCCGTTATTTGGTTCTATGAGGGCCAAGCTCCGCAGTATTCTGAATGGCAATAT
ATACAAGACTCAAGCACTCAGGTACTAACCATGAATTAG

Upstream 100 bases:

>100_bases
AGTTCGTCGATTTTGCAGCAGATAGTAGCGGTGCTACCAACCCAACTTGGTATGAAAATGCCACTGAATCATTAACCTTT
AACGACTAATGGAGCATGCC

Downstream 100 bases:

>100_bases
CGATGAGTTTACTTTTAACCTGAGGTAAACACAGCCTCAGTGGAAACACTAAATGCACCTTAAATCAGCTTTTGCTGCGA
TGGGATCTCTGGACCATCGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKIRFEKIINIPYGLMVCCALLITACGGGGDDAAPETPVPVETTTTTTTTTTTTTTEDPAPDPTSLDDLVVDADNKLESA
YMLTIDVDKDSIQRGYFSLCDDYQAQGDGYSVNFDSCLFRGPLTQGKLSKEVKVANHESQLIAVIWFYEGQAPQYSEWQY
IQDSSTQVLTMN

Sequences:

>Translated_172_residues
MKIRFEKIINIPYGLMVCCALLITACGGGGDDAAPETPVPVETTTTTTTTTTTTTTEDPAPDPTSLDDLVVDADNKLESA
YMLTIDVDKDSIQRGYFSLCDDYQAQGDGYSVNFDSCLFRGPLTQGKLSKEVKVANHESQLIAVIWFYEGQAPQYSEWQY
IQDSSTQVLTMN
>Mature_172_residues
MKIRFEKIINIPYGLMVCCALLITACGGGGDDAAPETPVPVETTTTTTTTTTTTTTEDPAPDPTSLDDLVVDADNKLESA
YMLTIDVDKDSIQRGYFSLCDDYQAQGDGYSVNFDSCLFRGPLTQGKLSKEVKVANHESQLIAVIWFYEGQAPQYSEWQY
IQDSSTQVLTMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18888; Mature: 18888

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRFEKIINIPYGLMVCCALLITACGGGGDDAAPETPVPVETTTTTTTTTTTTTTEDPA
CCEEHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCC
PDPTSLDDLVVDADNKLESAYMLTIDVDKDSIQRGYFSLCDDYQAQGDGYSVNFDSCLFR
CCCCCCCCEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEE
GPLTQGKLSKEVKVANHESQLIAVIWFYEGQAPQYSEWQYIQDSSTQVLTMN
CCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCEEECCCCCEEEEEC
>Mature Secondary Structure
MKIRFEKIINIPYGLMVCCALLITACGGGGDDAAPETPVPVETTTTTTTTTTTTTTEDPA
CCEEHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCC
PDPTSLDDLVVDADNKLESAYMLTIDVDKDSIQRGYFSLCDDYQAQGDGYSVNFDSCLFR
CCCCCCCCEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEE
GPLTQGKLSKEVKVANHESQLIAVIWFYEGQAPQYSEWQYIQDSSTQVLTMN
CCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA