| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is gshA
Identifier: 167623175
GI number: 167623175
Start: 1513579
End: 1515147
Strand: Direct
Name: gshA
Synonym: Shal_1241
Alternate gene names: 167623175
Gene position: 1513579-1515147 (Clockwise)
Preceding gene: 167623174
Following gene: 167623176
Centisome position: 28.96
GC content: 43.02
Gene sequence:
>1569_bases TTGAAACCTTTCAATGAATTAGTAGGCAAGCTGTCGGATGCGGCAAGTCGTCAAGCGCTAAAATCAATGCACCGAGGTAT TGAGCGTGAAGCGTTAAGAATTGAAAAGTCGGGTCACTTGGCGTTGGATAAGCATCCAAAAGCGCTAGGGTCGGCATTAA TGCATTCGCGGATCACCACTGATTATAGCGAGTCTCTACTTGAGTTTATTACTCCTGTTTTTGAAGATATCGATGAATTA GTCGAAGATCTGACCTTAACTCATGCCTATAGTGTGCGTCATTTAAACGGTCAACGCCTGTGGCCTGTTAGTATGCCGTG TTACCTTGGGGACGCAGGCGATATTCCTATTGCTGATTATGGCAGCTCTAACACCGGACAAATGAAGCGTTTATATCGAA AAGGGCTGACTTATCGATATGGTGCACAGATGCAAATTATTTCAGGAGTGCATTTTAATTTCTCTGTTTCAGACCAACTC TGGAACAGATTGTACGAATTATCGGACACGTCTTTAAGTTTAGAGGAGTTTATCTCTGAGTCTTATTTCGGTCTTATTCG TAACTATCGCCGTCTAGTCTGGGTGCTACCTTACCTGTTTGGTGCATCACCAGCGCTGTGCAGCACATTTATCCAAGATC CAAAGACCAATGAGTTTCCTTTTGAAGTCATTGGTAACGGCACCTTGTATCTGCCTTATGCGACCTCATTGCGTATGAGC GACTTAGGCTATACCAACCAAGAGCAAGACAACTTAAATATTAGTTACAATAGCTTAGCTTGTTACTTGGAAGGAATGAA ATCAGCGATTAATATGCCTTCGGCTAAGTTCGCAAAAATTGGTGTCAAAGTTGATGGTGAGTATCGTCAGCTCAATGCCA ATATTTTACAGATAGAAAATGAATTCTATTCCCCAATTCGTGCGAAACGTGTAGCAAAAGGTAACGAAAAGCCCTCAGAA TCGCTTGCTCGTGCGGGGGTTGAGTATATTGAGGTTAGAGCATTAGATGTTAACCCTTATAGTGCTGTAGGTATTGAAAA GTCACAAATTCGTTTCCTTGACTTGTTCTTATTGAATTGCTTATTGCAGCCATCACCAGCATCAGATGCAAGTGAAGAGG CTGAGATTGCCGCTAACTTGCAAGCCGTGGTGTTAGAGGGACGCAAACCTGGGCTTAAATTAACTCGTGCAGGTGAAGAG GTGAGTCTAAGTGGCTGGCTTGAGTCACTATTTGGTAATCTAAACGATATCGCTAAATTACTTGATGATGAAGGGCAAGA CGATTACCAAGTCGCACTTGCTAAGTGGCAGAAGGCCGTCAACGATCCTGATGCAACTCTGTCGGGCCAAATTATTAAAG GCCTTAAAGACAACCAAATTGATCATGGTGATTGGGTATTACAGCTTGCAGAGCAGTACCATCAAGAGCTAAAAGGCTAT CCTTTATCAGAGGCTGTGACAATGCGCTATGAGCAGGACGCACAAGCATCACTTGAGAAACAAGCTAGGTTAGAAGCTGA GCCTAGCGTGAGCTTTGATGATTTTTTAGCTGACTATTTTAAGGCATAA
Upstream 100 bases:
>100_bases TAAAAAACGCTAATTTGGTACGACTTGAAATTTAAGTTGGCTATAGCGGGTCTGACTGACATGCTATATGGGTTAAAGTC ACGTACTAGAGAGTAATATA
Downstream 100 bases:
>100_bases CGTTGGGGACTCTGGGGTTGAAAAGCGTAGTGAGTGTTGCCGCATTGGCGTTGCTAATATCGGGCTGTGCGACACAACCC GATACCGCTAATCAGTGCGG
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: Gamma-ECS; GCS; Gamma-glutamylcysteine synthetase
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MKPFNELVGKLSDAASRQALKSMHRGIEREALRIEKSGHLALDKHPKALGSALMHSRITTDYSESLLEFITPVFEDIDEL VEDLTLTHAYSVRHLNGQRLWPVSMPCYLGDAGDIPIADYGSSNTGQMKRLYRKGLTYRYGAQMQIISGVHFNFSVSDQL WNRLYELSDTSLSLEEFISESYFGLIRNYRRLVWVLPYLFGASPALCSTFIQDPKTNEFPFEVIGNGTLYLPYATSLRMS DLGYTNQEQDNLNISYNSLACYLEGMKSAINMPSAKFAKIGVKVDGEYRQLNANILQIENEFYSPIRAKRVAKGNEKPSE SLARAGVEYIEVRALDVNPYSAVGIEKSQIRFLDLFLLNCLLQPSPASDASEEAEIAANLQAVVLEGRKPGLKLTRAGEE VSLSGWLESLFGNLNDIAKLLDDEGQDDYQVALAKWQKAVNDPDATLSGQIIKGLKDNQIDHGDWVLQLAEQYHQELKGY PLSEAVTMRYEQDAQASLEKQARLEAEPSVSFDDFLADYFKA
Sequences:
>Translated_522_residues MKPFNELVGKLSDAASRQALKSMHRGIEREALRIEKSGHLALDKHPKALGSALMHSRITTDYSESLLEFITPVFEDIDEL VEDLTLTHAYSVRHLNGQRLWPVSMPCYLGDAGDIPIADYGSSNTGQMKRLYRKGLTYRYGAQMQIISGVHFNFSVSDQL WNRLYELSDTSLSLEEFISESYFGLIRNYRRLVWVLPYLFGASPALCSTFIQDPKTNEFPFEVIGNGTLYLPYATSLRMS DLGYTNQEQDNLNISYNSLACYLEGMKSAINMPSAKFAKIGVKVDGEYRQLNANILQIENEFYSPIRAKRVAKGNEKPSE SLARAGVEYIEVRALDVNPYSAVGIEKSQIRFLDLFLLNCLLQPSPASDASEEAEIAANLQAVVLEGRKPGLKLTRAGEE VSLSGWLESLFGNLNDIAKLLDDEGQDDYQVALAKWQKAVNDPDATLSGQIIKGLKDNQIDHGDWVLQLAEQYHQELKGY PLSEAVTMRYEQDAQASLEKQARLEAEPSVSFDDFLADYFKA >Mature_522_residues MKPFNELVGKLSDAASRQALKSMHRGIEREALRIEKSGHLALDKHPKALGSALMHSRITTDYSESLLEFITPVFEDIDEL VEDLTLTHAYSVRHLNGQRLWPVSMPCYLGDAGDIPIADYGSSNTGQMKRLYRKGLTYRYGAQMQIISGVHFNFSVSDQL WNRLYELSDTSLSLEEFISESYFGLIRNYRRLVWVLPYLFGASPALCSTFIQDPKTNEFPFEVIGNGTLYLPYATSLRMS DLGYTNQEQDNLNISYNSLACYLEGMKSAINMPSAKFAKIGVKVDGEYRQLNANILQIENEFYSPIRAKRVAKGNEKPSE SLARAGVEYIEVRALDVNPYSAVGIEKSQIRFLDLFLLNCLLQPSPASDASEEAEIAANLQAVVLEGRKPGLKLTRAGEE VSLSGWLESLFGNLNDIAKLLDDEGQDDYQVALAKWQKAVNDPDATLSGQIIKGLKDNQIDHGDWVLQLAEQYHQELKGY PLSEAVTMRYEQDAQASLEKQARLEAEPSVSFDDFLADYFKA
Specific function: Glutathione biosynthesis; first step. [C]
COG id: COG2918
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1789044, Length=503, Percent_Identity=46.9184890656064, Blast_Score=451, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSH1_SHEHH (B0TK23)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673469.1 - ProteinModelPortal: B0TK23 - SMR: B0TK23 - GeneID: 5904229 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1241 - HOGENOM: HBG289023 - OMA: FGLIRNY - ProtClustDB: PRK02107 - BioCyc: SHAL458817:SHAL_1241-MONOMER - HAMAP: MF_00578 - InterPro: IPR007370 - InterPro: IPR006334 - TIGRFAMs: TIGR01434
Pfam domain/function: PF04262 Glu_cys_ligase
EC number: =6.3.2.2
Molecular weight: Translated: 58584; Mature: 58584
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFNELVGKLSDAASRQALKSMHRGIEREALRIEKSGHLALDKHPKALGSALMHSRITT CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCEEECCCHHHHHHHHHHHHHCC DYSESLLEFITPVFEDIDELVEDLTLTHAYSVRHLNGQRLWPVSMPCYLGDAGDIPIADY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCEEECCCCCCCCCCC GSSNTGQMKRLYRKGLTYRYGAQMQIISGVHFNFSVSDQLWNRLYELSDTSLSLEEFISE CCCCHHHHHHHHHCCCCEEECCCEEEEECEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHH SYFGLIRNYRRLVWVLPYLFGASPALCSTFIQDPKTNEFPFEVIGNGTLYLPYATSLRMS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCEEHH DLGYTNQEQDNLNISYNSLACYLEGMKSAINMPSAKFAKIGVKVDGEYRQLNANILQIEN HCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCHHHHCCHHEEECH EFYSPIRAKRVAKGNEKPSESLARAGVEYIEVRALDVNPYSAVGIEKSQIRFLDLFLLNC HHHCHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LLQPSPASDASEEAEIAANLQAVVLEGRKPGLKLTRAGEEVSLSGWLESLFGNLNDIAKL HCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHH LDDEGQDDYQVALAKWQKAVNDPDATLSGQIIKGLKDNQIDHGDWVLQLAEQYHQELKGY HCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC PLSEAVTMRYEQDAQASLEKQARLEAEPSVSFDDFLADYFKA CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKPFNELVGKLSDAASRQALKSMHRGIEREALRIEKSGHLALDKHPKALGSALMHSRITT CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCEEECCCHHHHHHHHHHHHHCC DYSESLLEFITPVFEDIDELVEDLTLTHAYSVRHLNGQRLWPVSMPCYLGDAGDIPIADY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCEEECCCCCCCCCCC GSSNTGQMKRLYRKGLTYRYGAQMQIISGVHFNFSVSDQLWNRLYELSDTSLSLEEFISE CCCCHHHHHHHHHCCCCEEECCCEEEEECEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHH SYFGLIRNYRRLVWVLPYLFGASPALCSTFIQDPKTNEFPFEVIGNGTLYLPYATSLRMS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCEEHH DLGYTNQEQDNLNISYNSLACYLEGMKSAINMPSAKFAKIGVKVDGEYRQLNANILQIEN HCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCHHHHCCHHEEECH EFYSPIRAKRVAKGNEKPSESLARAGVEYIEVRALDVNPYSAVGIEKSQIRFLDLFLLNC HHHCHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LLQPSPASDASEEAEIAANLQAVVLEGRKPGLKLTRAGEEVSLSGWLESLFGNLNDIAKL HCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHH LDDEGQDDYQVALAKWQKAVNDPDATLSGQIIKGLKDNQIDHGDWVLQLAEQYHQELKGY HCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC PLSEAVTMRYEQDAQASLEKQARLEAEPSVSFDDFLADYFKA CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA